Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02672 and BL01254
See
Amino acid alignment /
Visit
BSNT_02672 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence dna-align/BSNT_02672___flhA.1.5803.seq
# -bsequence dna-align/BL01254___flhA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02672___flhA-BL01254___flhA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02672___flhA-BL01254___flhA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02672___flhA
# 2: BL01254___flhA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2052
# Identity: 1573/2052 (76.7%)
# Similarity: 1573/2052 (76.7%)
# Gaps: 33/2052 ( 1.6%)
# Score: 5980.5
#
#
#=======================================
BSNT_02672___ 1 ATGTCAACAAGAGATTTATCCGTTTTAATAAGTGTTGTCCTCATTGTGGC 50
|||||..|||||||||||||..|||||....|.|||||||||||||||||
BL01254___flh 1 ATGTCTGCAAGAGATTTATCTATTTTATCCGGCGTTGTCCTCATTGTGGC 50
BSNT_02672___ 51 GATGCTGGTGATTCCATTTCCTCCATGGCTGTTAAGTATTTTGATCATTA 100
.|||||..|.||.||.|||||..|||||.||||.||.||.||.||.||..
BL01254___flh 51 AATGCTTATCATACCCTTTCCAACATGGATGTTGAGCATCTTAATTATCG 100
BSNT_02672___ 101 TTAATATTTCTCTTGCGTTGATCGTGCTTCTCACCACAATGAATATGCAG 150
|||||||||||||||||||.|||||||||||||||||||||||.|||||.
BL01254___flh 101 TTAATATTTCTCTTGCGTTAATCGTGCTTCTCACCACAATGAACATGCAA 150
BSNT_02672___ 151 GAAGCGCTTCAGTTTTCGATTTTTCCGTCACTGTTGCTGCTTTTGACCCT 200
|||.||||.||.||||||||||||||.||..||.||||.||.|||||.||
BL01254___flh 151 GAACCGCTGCAATTTTCGATTTTTCCTTCTTTGCTGCTCCTCTTGACGCT 200
BSNT_02672___ 201 ATTTCG-TTTGGGCTTGAACGTCTCAACTACCCGTTCAATTCTTTCACAC 249
.||.|| .|||||| ||||.||.||.||.||.|||||.|||||.||..||
BL01254___flh 201 GTTCCGCCTTGGGC-TGAATGTATCGACGACGCGTTCGATTCTGTCCAAC 249
BSNT_02672___ 250 GGTGAAGGAGGGAAAGTCGTCGAGACTTTCGGAAATTTCGTTGTCGGCGG 299
|||||.|..||.|||||.||||||||.|||||...|||||||||||||||
BL01254___flh 250 GGTGATGCGGGAAAAGTAGTCGAGACGTTCGGGTCTTTCGTTGTCGGCGG 299
BSNT_02672___ 300 AAATGTATTAGTTGGACTCGTTGTATTTATCATCCTTATTATTATTCAGT 349
|||.||.||.||.||.||||||||.||||||||..|.||.||||||||.|
BL01254___flh 300 AAACGTTTTGGTCGGTCTCGTTGTCTTTATCATTTTGATCATTATTCAAT 349
BSNT_02672___ 350 TTATCGTCATTACAAAAGGTGCTGAACGTGTTTCCGAGGTTGCAGCAAGG 399
||||||||||.||.|||||.||.|||||.||.||.||.|||||.||.||.
BL01254___flh 350 TTATCGTCATAACGAAAGGGGCGGAACGGGTATCTGAAGTTGCTGCCAGA 399
BSNT_02672___ 400 TTTACGCTGGACGCAATGCCGGGGAAGCAGATGAGTATTGATGCTGATTT 449
||.|||||.|||||.||||||||.||.||||||||.||||||||.|||||
BL01254___flh 400 TTCACGCTCGACGCCATGCCGGGAAAACAGATGAGCATTGATGCCGATTT 449
BSNT_02672___ 450 AAACGCAGGGATGATTACCGAACAGGAAGCGAAGCATCGCCGCGAAAAAG 499
.||.||.||.|||.|.|||||.||||||||||||...|||||.||.||.|
BL01254___flh 450 GAATGCCGGAATGGTGACCGAGCAGGAAGCGAAGGTGCGCCGTGAGAAGG 499
BSNT_02672___ 500 TGGCAAGAGAAGCAGACTTTTATGGAGCAATGGACGGTGCCAGTAAATTT 549
||||..|.|||||.|||||.||||||||.||||||||.||.||.|||||.
BL01254___flh 500 TGGCCCGTGAAGCCGACTTCTATGGAGCGATGGACGGAGCGAGCAAATTC 549
BSNT_02672___ 550 GTAAAAGGTGACGCCATTGCCGGAATCATCATTGTGATGATCAATATTAT 599
||.|||||.||.||.||.||.||.||||||||.||..|.|||||..|.||
BL01254___flh 550 GTGAAAGGGGATGCGATCGCAGGGATCATCATCGTCCTTATCAACGTCAT 599
BSNT_02672___ 600 TTTCGGAATCGTGATCGGAATGCTTCAGCAGGGCATGTCCATTCAAGAGG 649
|||||||||.||.|||||.|||||.||..|....|||..||||||.||.|
BL01254___flh 600 TTTCGGAATTGTCATCGGCATGCTGCAAAAACAAATGAGCATTCAGGAAG 649
BSNT_02672___ 650 CTGCTTCACACTTTACGATGCTGACTGTAGGGGATGGAATTGTTTCGCAA 699
|.||||||||||||||..|.|||.|||||||.||.|||||.||.||.||.
BL01254___flh 650 CCGCTTCACACTTTACACTCCTGTCTGTAGGCGACGGAATCGTATCTCAG 699
BSNT_02672___ 700 ATCCCGGCACTGTTAATTTCTACGGCTACGGGTATTGTGGTCACAAGAGC 749
.|.||.||.||.||.||.||.|||||.||||||||.||.||.||||||||
BL01254___flh 700 CTGCCTGCGCTCTTGATCTCAACGGCGACGGGTATCGTCGTGACAAGAGC 749
BSNT_02672___ 750 TGCATCTGAAGGAAACTTAGGGCATGACATTACAGGCCAGCTGTTTGCGT 799
.||.||.||.||||||.|.||.||.||.||||||||||||||||||||.|
BL01254___flh 750 GGCGTCGGACGGAAACCTCGGCCACGATATTACAGGCCAGCTGTTTGCCT 799
BSNT_02672___ 800 ATCCAAAGCTTTTATACGTCGCAGCAGCTACGATCATGCTTTTAGGTATT 849
||||.||||||||.||.|||.|.||.|..|||||..|.||..|.||.|||
BL01254___flh 800 ATCCGAAGCTTTTGTATGTCACGGCGGGAACGATTTTCCTGCTCGGGATT 849
BSNT_02672___ 850 TTCACTCCGATCGGCATCCTTCTGACGGGGCCGCTTGCGGGATTGCTTGC 899
|||||.|||||||||||.||.|||||.||.||.||.|| .||| |
BL01254___flh 850 TTCACGCCGATCGGCATTCTCCTGACAGGCCCTCTGGC------TCTT-C 892
BSNT_02672___ 900 TTTT-------GGCGCATATACACTATCTATATCAGGTAAGGAAAAAGAA 942
||.| ||||..||||..||.||.|.|.|.|||.|.||.||.|||
BL01254___flh 893 TTCTCGCCGCAGGCGGCTATATGCTCTCCAAAGCCGGTGAAGAGAAGGAA 942
BSNT_02672___ 943 GAAGTGGATGAGATTCTTGAGGAAGAGGCTGAGGTGGACGAGCTTAAAAG 992
.|||||||.||.||.|||||||||||.|||||.|||||.||..|.|||||
BL01254___flh 943 AAAGTGGAGGATATCCTTGAGGAAGAAGCTGAAGTGGATGAATTAAAAAG 992
BSNT_02672___ 993 CCCTGAAAGTGTCGTTCAGCTTCTGCATATAGATCCGATAGAATTTGAGT 1042
|||.|||||.|||||.||.||.||..||||.||||||||.||.|||||.|
BL01254___flh 993 CCCCGAAAGCGTCGTCCATCTGCTTGATATTGATCCGATCGAGTTTGAAT 1042
BSNT_02672___ 1043 TTGGATATGGCCTGATACCGCTTGCTGATGCCAATCAAGGCGGTGATTTA 1092
|.||.||.||..||||.||||||||.|||||.|||||.|||||.|||.|.
BL01254___flh 1043 TCGGCTACGGATTGATTCCGCTTGCAGATGCAAATCAGGGCGGCGATCTG 1092
BSNT_02672___ 1093 TTAGACCGAATTGTTATGATACGCCGTCAGTTGGCTTTGGAACTCGGGCT 1142
||.|||.|||||||.|||||..|.||.|||.|.||..|.||||||||.||
BL01254___flh 1093 TTGGACAGAATTGTCATGATCAGGCGCCAGCTCGCGCTTGAACTCGGACT 1142
BSNT_02672___ 1143 TGTCATTCCTGTCGTGCGAATCAGAGATAATATAGCGTTGCAGCCTAATG 1192
|||||||||.|||||..|||||||.|||||.||.||..|.|||||.||.|
BL01254___flh 1143 TGTCATTCCGGTCGTCAGAATCAGGGATAACATCGCTCTTCAGCCGAACG 1192
BSNT_02672___ 1193 AATACCGATTGAAAATTAAAGGAAACGAAGTAGCAAAAGGCGAGCTGTTG 1242
|.|||.|..|.||||||||||||||||||||.||.|||||||||||..|.
BL01254___flh 1193 AGTACAGGCTCAAAATTAAAGGAAACGAAGTCGCGAAAGGCGAGCTTCTC 1242
BSNT_02672___ 1243 CTTGATCATTATTTAGCGATGTCGCCTACTCCTGAGGACGATCTCATTGA 1292
||.|||||.|.|.|.||||||||.||.||....||.|||||||..||.||
BL01254___flh 1243 CTCGATCACTTTCTGGCGATGTCTCCGACAGGCGAAGACGATCAGATCGA 1292
BSNT_02672___ 1293 AGGGATTGAAACAGTGGAGCCTTCATTCGGTCTGCCGGCTAAATGGATTA 1342
|||||||||.|||.|.||.||.||.||||||||.||||||||||||||
BL01254___flh 1293 AGGGATTGACACAATCGAACCGTCCTTCGGTCTTCCGGCTAAATGGAT-- 1340
BSNT_02672___ 1343 GCGAAGCGGTA------AAGGATGAAGCCGACATGCTTGGTTATACAGTA 1386
|.|||.| ||.|||.|.|||||.|||||.||.||.||.||.
BL01254___flh 1341 ----ACCGGAATCTCAGAAAGATCAGGCCGAAATGCTCGGGTACACGGTT 1386
BSNT_02672___ 1387 GTTGATCCTGCATCAGTCGTTTCAACGCATATTACGGAGAAAATTAAGCA 1436
||.|||||.||.||||||||.||.||.||||||||||||.|..|.||..|
BL01254___flh 1387 GTCGATCCGGCTTCAGTCGTATCGACCCATATTACGGAGCAGGTGAAAAA 1436
BSNT_02672___ 1437 GCATGCCCACGAATTGATCGGAAGGCAGGAGACAAAACAGCTGATCGATC 1486
|||.|||||.||..||||||||||.|||||.||.||||||||||||||.|
BL01254___flh 1437 GCACGCCCATGAGCTGATCGGAAGACAGGAAACGAAACAGCTGATCGACC 1486
BSNT_02672___ 1487 ACTTGAAAGAATCGTATCCAGTCCTGGTTGAAGAGGTTACGCCGAATCCA 1536
|||||||||||||.|||||.||.|||||.||||||||..||||||||||.
BL01254___flh 1487 ACTTGAAAGAATCTTATCCTGTACTGGTCGAAGAGGTCTCGCCGAATCCG 1536
BSNT_02672___ 1537 TTGTCTGTCGGTGATATTCAGAAAGTGCTTGCTAAGCTTTTAAAAGAAAA 1586
.|||||||||||||.||||||||||||||.||.||.|||.|.||||||||
BL01254___flh 1537 CTGTCTGTCGGTGACATTCAGAAAGTGCTGGCAAAACTTCTGAAAGAAAA 1586
BSNT_02672___ 1587 AGTTTCAATTCGAAACTTAGTAACGATTTTTGAAACGCTTGCTGACTATG 1636
|||.||.||..|.|||||.||.||.||.|||||||||||.||.|||||.|
BL01254___flh 1587 AGTATCGATCAGGAACTTGGTGACAATCTTTGAAACGCTGGCCGACTACG 1636
BSNT_02672___ 1637 GGAAATTAACAACAGATTCTGATCTTTTGACAGAGTATACAAGACAAGCG 1686
|.||..|.||.||.|||||.|||.|..||||.||||||...|||||.||.
BL01254___flh 1637 GAAAGCTGACGACGGATTCAGATATGCTGACCGAGTATGTCAGACAGGCT 1686
BSNT_02672___ 1687 CTTGCTAAACAAATTACAGCACAGTTTGCCAAAGAAAATGAAGTGTTGAA 1736
||.||.||.||.||.||.||.||.|.|||.||.||||||||...|.||||
BL01254___flh 1687 CTGGCCAAGCAGATCACCGCCCAATATGCGAAGGAAAATGAGACGCTGAA 1736
BSNT_02672___ 1737 GGTTGTTACTTGTTCGGGCCGTGTAGAAAAGGCAATAGCAGACGGTGTGC 1786
.||.||.||||||||||||||.||.||||||||..|.||.||.||..|.|
BL01254___flh 1737 AGTGGTGACTTGTTCGGGCCGCGTCGAAAAGGCCGTGGCGGAAGGAATTC 1786
BSNT_02672___ 1787 AGCAGACGGAACACGGGAACTATTTATCACTTGAACCAGATATT-TCAGA 1835
|||||||.||||||||.||||.||||||.||||||||| |.||| ||.||
BL01254___flh 1787 AGCAGACTGAACACGGCAACTTTTTATCTCTTGAACCA-ACATTATCCGA 1835
BSNT_02672___ 1836 AAGTATAGTGCGCTCTGTCGCTAAAGAAGCTGAACAGCTCTCATTACGTC 1885
||.|||..|.|..|||||.||.|.||||...||||||||||||||..|.|
BL01254___flh 1836 AAATATCATTCAATCTGTAGCAAGAGAAATCGAACAGCTCTCATTGAGGC 1885
BSNT_02672___ 1886 AGGAAACCGCGATTCTTCTTTGCTCGCCGCCTGTCAGAATGTATGTGAAG 1935
|||||....||||.|||||.||.|||||||||||||||||||||||.|||
BL01254___flh 1886 AGGAAGTGCCGATCCTTCTATGTTCGCCGCCTGTCAGAATGTATGTCAAG 1935
BSNT_02672___ 1936 CAGCTTCTGGAACGGTACTTCCCTGATCTTCCGGTACTCTCTTATAACGA 1985
|||||.||.||.||.||.|||||||||||.|||||.||.||.||||||||
BL01254___flh 1936 CAGCTGCTTGAGCGCTATTTCCCTGATCTGCCGGTTCTTTCCTATAACGA 1985
BSNT_02672___ 1986 ACTTGAGGCGAATGTTGAGGTACAAAGCATTGGAGTGGTGGATATTTAA- 2034
|.|.||.||.|||||.||.||.||||||||.|||||||||||||||.||
BL01254___flh 1986 ATTGGAAGCCAATGTAGAAGTTCAAAGCATCGGAGTGGTGGATATTCAAT 2035
BSNT_02672___ 2034 -- 2034
BL01254___flh 2036 GA 2037
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.