Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02675 and BL01252
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence dna-align/BSNT_02675___ylxH.1.5803.seq
# -bsequence dna-align/BL01252___ylxH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02675___ylxH-BL01252___ylxH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02675___ylxH-BL01252___ylxH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02675___ylxH
# 2: BL01252___ylxH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 986
# Identity: 589/986 (59.7%)
# Similarity: 589/986 (59.7%)
# Gaps: 193/986 (19.6%)
# Score: 1597.0
#
#
#=======================================
BSNT_02675___ 1 ATGAACAGATATGACCAAGCAGCAACTTTACG--GGCGAAAATGGAAAAA 48
||| ||.||.||||.||...|||| |||| .||||
BL01252___ylx 1 ATG---------GATCAGGCAGAAAGCCTACGAAGGCG--GATGG----- 34
BSNT_02675___ 49 CGTGAGCGCGTT----------CTGC--CAATGGTTTATTCACAAAAAGC 86
|..|||||.|| |.|| |.||.|.|.|| |.||||||
BL01252___ylx 35 -GGCAGCGCTTTGCCGAACCGCCCGCCGCTATCGCTCAT---CCAAAAGC 80
BSNT_02675___ 87 GAAGACACTTGCTGTCATCAGCGGCAAGGGCGGTGTCGGAAAATCCAATA 136
|||.||.||.||||||||.|||||.||.||.||.|||||.||.||.|||.
BL01252___ylx 81 GAAAACGCTCGCTGTCATGAGCGGAAAAGGAGGCGTCGGGAAGTCGAATG 130
BSNT_02675___ 137 TTACCTTAAATATGGCACTTGCGCTCCAGGATAAAGGTAAGAAGGTGCTG 186
|..|..|.||||.|||.||.||..|.|.|||.|||||.||||..||||||
BL01252___ylx 131 TATCGCTGAATACGGCTCTCGCCATTCTGGAAAAAGGAAAGAGCGTGCTG 180
BSNT_02675___ 187 CTCATCGACCTTGATATCGGGATGGGGAACATTGATATATTAAT----AG 232
.|.|||||.||||||.||||.|||||||||||||||||..|.|| .|
BL01252___ylx 181 TTGATCGATCTTGATGTCGGTATGGGGAACATTGATATTCTGATCGGCCG 230
BSNT_02675___ 233 GAAAT------------TCAT---CGTCTGCCA-CGATAATTGATGTTTT 266
|.||| |.|| |.||..||| |.|.||.||..||||
BL01252___ylx 231 GCAATCGCTCTACACGGTGATGGACCTCCTCCAGCAAAAAATGCCGTTT- 279
BSNT_02675___ 267 AACCGATCGTAAGCCTTTGCTCCAGTCATTATCCATTGGCCC-AAAGGGT 315
||.|| .||||| ||| |.|| ||||| ..|||..
BL01252___ylx 280 ----GAGCG--CGCCTT-------GTC---AGCC---GGCCCGCGAGGCC 310
BSNT_02675___ 316 TTGCGGTATATATCAGGGGGAACCGGTCTTGATGTGATGTTTCAGCTCGA 365
|| |..||.||.||.||.||||||||.||.||||..||| |||...|.||
BL01252___ylx 311 TT-CAATACATTTCGGGCGGAACCGGGCTGGATGCAATG-TTCGAATTGA 358
BSNT_02675___ 366 TCAGAGAAAA-TGGACGTTTTTTGCCAATGAACTTTCTCATGCATT---A 411
.|||.||||| |||.||||||||...||.|||.|..|.|..||.|| |
BL01252___ylx 359 ACAGGGAAAACTGGGCGTTTTTTCTGAAGGAATTGACGCGGGCTTTGACA 408
BSNT_02675___ 412 AGCCAGTTCGATTATGTGCTGTTTGATATGGGAGCGGGTTTATCAAAAGA 461
||| |||||.|||||..|.|||||.|||||||||||..|.||||||||
BL01252___ylx 409 AGC---TTCGACTATGTCATATTTGACATGGGAGCGGGGCTGTCAAAAGA 455
BSNT_02675___ 462 TCAACTGCCTTTTATTTTATCAGCAGAAGATATTTTGATTATAACAACTC 511
|||.||||||||..|..|.|||||.||.||.|||.||.|..|.||.||.|
BL01252___ylx 456 TCAGCTGCCTTTCGTCCTGTCAGCGGATGAAATTCTGGTCGTCACCACGC 505
BSNT_02675___ 512 CCGAGCCGACGGCCATTTTGGACGCATACAGCGCTGTCAAGCACTTGGTT 561
|.||||||||..||||..||||||||||||||||..|||||||.||||..
BL01252___ylx 506 CGGAGCCGACATCCATCATGGACGCATACAGCGCGATCAAGCATTTGGCA 555
BSNT_02675___ 562 TTGACAGAAAATAAGCTTTCA-ATGAAGGTGGCTGTCAATCGGTG----- 605
||.||.|.|....|.| |||| .||||.||.|.|||||||||.||
BL01252___ylx 556 TTAACCGGACGCGATC-TTCAGCTGAAAGTCGTTGTCAATCGCTGTACAA 604
BSNT_02675___ 606 CCGTGACCAAAAGGAAGGGCTTGACGCTTTTGCCCGCCTCTC-----CCG 650
| ||||||.||.||..||...||||||..||||||.|| |.|
BL01252___ylx 605 C-----CCAAAAAGACGGAATTTCTGCTTTTCTCCGCCTTTCCAACACGG 649
BSNT_02675___ 651 TACAATTCATATGTTT------------TTGGATGTTCAGGTTCAGTTTG 688
|| ||..| |.||| |||.||.|.|||| |
BL01252___ylx 650 TA-AACGC---TTTTTTGCAGCAAAAGCTTGCATATGCAGG--------G 687
BSNT_02675___ 689 CCGGTTCCGTTTCTGACGAT---GTGATCGTGAGCAA-AGCGGTTGTCGA 734
|||.||| ||||.||| .||.|| .||| |||.|||||.||
BL01252___ylx 688 CCGATTC-----CTGAGGATCCCCTGGTC----TCAAGAGCCGTTGTGGA 728
BSNT_02675___ 735 ACAGGTTCCTTTTTTCATAAAAA----GCCCTCAGGCAAAAGCC-AGCCG 779
.|||...||.|||.|.|||||.| ||..|| .||||| |||.|
BL01252___ylx 729 GCAGCAGCCGTTTCTGATAAAGAATCCGCGTTC-----CAAGCCGAGCAG 773
BSNT_02675___ 780 GTCAGTCCGTATTTTA-------GCGGA--CGCCTTGTTT------GGAA 814
|.|.| |||| ||.|| ||| ||.|| ||.|
BL01252___ylx 774 GGCGG-------TTTACCTGCTGGCCGAATCGC--TGCTTCATAACGGCA 814
BSNT_02675___ 815 GAGAAGAAACGAGACACAAAGAAGACAAACAGACATTTATTGAGAAATTA 864
||...||||.| |..||.||.|.|.|.|||||.||.||||||
BL01252___ylx 815 GAACGGAAATG---------GGCGAAAACCGGTCCTTTATCGAAAAATTA 855
BSNT_02675___ 865 TCTTCTTTTTTAATGAGGAGGG------CTTAA--- 891
||||| .||..||||||||| |.|.|
BL01252___ylx 856 TCTTC---ATTCCTGAGGAGGGGCAATACATTATGA 888
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