Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02681 and BL01248
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence dna-align/BSNT_02681.1.5803.seq
# -bsequence dna-align/BL01248___cheC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02681-BL01248___cheC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02681-BL01248___cheC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02681
# 2: BL01248___cheC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 644
# Identity: 219/644 (34.0%)
# Similarity: 219/644 (34.0%)
# Gaps: 358/644 (55.6%)
# Score: 775.0
#
#
#=======================================
BSNT_02681 0 -------------------------------------------------- 0
BL01248___che 1 ATGAGCGTATTTAACGGAATTAGAGAAGAGCATCTTGATATATTGCGGGA 50
BSNT_02681 0 -------------------------------------------------- 0
BL01248___che 51 AGTCGGGAATATCGGAGCGGGCCATTCCGCTTCCGCCCTGGCCCTGTTGC 100
BSNT_02681 0 -------------------------------------------------- 0
BL01248___che 101 TGAACAGGAAAATCGAAATGGAAGTGCCGTTTGTCAAGCTGATGTCGTTT 150
BSNT_02681 0 -------------------------------------------------- 0
BL01248___che 151 GATGAGCTTGTCAACCTATTCGGCGGTGCAGATCTTCCTGTCGCAAGCAT 200
BSNT_02681 0 -------------------------------------------------- 0
BL01248___che 201 CTTTTTGCGCATGGAAGGGGATTTTCCAGGTTCTATGTTCGTGATCATGC 250
BSNT_02681 0 -------------------------------------------------- 0
BL01248___che 251 CTTTTTCAGAGGCCGAGCAGCTGATCAGGGAGCTTGTCGGCAATCCGGAA 300
BSNT_02681 1 ------------------------------AT--GAGCTCATCCGCTTTG 18
|| ||| |.||.||..||
BL01248___che 301 TTCGAGATTGACAGCATGACGCCGAACGATATCGGAG--CCTCTGCCCTG 348
BSNT_02681 19 CATGAACTGGGCAATATTTTAGCGGGGTCATATTTAACAGCTTTGGCGGA 68
||.|||||.||.||.|||.|.|||||.||.|||||.||.|||.|.||.||
BL01248___che 349 CACGAACTCGGAAACATTATGGCGGGATCTTATTTGACCGCTCTCGCTGA 398
BSNT_02681 69 TTTGACGAAACTCCAGCTCTATCCAAGTGTTCCTGAAGTCTCTTTGGACA 118
||||||.||.|..||..|.||.||.||.||.||.|||.|..|..|.||.|
BL01248___che 399 TTTGACAAACCGGCAAATGTACCCGAGCGTCCCAGAACTGACGCTAGATA 448
BSNT_02681 119 TGTTCGGAGCAGTGATCAGCGAAGGGCTGATGGAGCTCAGTCAGGTTGGA 168
||||||||||.||.|||||||||||||||||.||||||||.||.||.|||
BL01248___che 449 TGTTCGGAGCCGTCATCAGCGAAGGGCTGATCGAGCTCAGCCAAGTCGGA 498
BSNT_02681 169 GAACACGCCATTGTTGTCGACACGTCAATTTTTGACCAAAGCCATCAGCA 218
||.||.|..||.||..||||||..||.||||||||| .|
BL01248___che 499 GATCAAGTTATCGTGATCGACAACTCCATTTTTGAC------------GA 536
BSNT_02681 219 GGAGC------------TGAAAGCGCATATGTTTATGCTGCCGGACTATG 256
||||| |.|||||||||.||||..|.|||||||||||||
BL01248___che 537 GGAGCACAACCGGAAAGTTAAAGCGCATTTGTTCCTTCTGCCGGACTATG 586
BSNT_02681 257 ATTCATTTGAAAAGCTCTTTGTCGCCTTAGGTGCATCATTATGA 300
||||.|||||||||||||||...||.||.||||||.|..|||||
BL01248___che 587 ATTCTTTTGAAAAGCTCTTTCATGCATTGGGTGCAGCGCTATGA 630
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