Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02684 and BL01245
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:24
# Commandline: needle
# -asequence dna-align/BSNT_02684___ylxL.1.5803.seq
# -bsequence dna-align/BL01245___ylxL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02684___ylxL-BL01245___ylxL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02684___ylxL-BL01245___ylxL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02684___ylxL
# 2: BL01245___ylxL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 569
# Identity: 350/569 (61.5%)
# Similarity: 350/569 (61.5%)
# Gaps: 112/569 (19.7%)
# Score: 966.5
#
#
#=======================================
BSNT_02684___ 1 GTGAAAAACATGTCAACACTATTATGGCTTTTAAGCTTTACGCTCCACGG 50
|||||||||.|||||||||||.|.|||||.|||||||||||
BL01245___ylx 1 ---------ATGTCAACAATATTATGGCTTGTGAGCTTCACGCTCCACGG 41
BSNT_02684___ 51 CGTTCTTCTGTACGCTGTCATTATCCTGTATACGAGGCTC-GCTGCAGTG 99
..|..|..|.||....|||||.||..||.||||||||||| || ||..|.
BL01245___ylx 42 TATATTGATTTATTTCGTCATCATTTTGAATACGAGGCTCAGC-GCTTTC 90
BSNT_02684___ 100 AAAGAAACAGAAAAACAGCAAAAACAGATACTTGAAGAGACGGAAAACAC 149
||.|.|.|.||.|||.|||||||||||.|..|.|||||.||.||.||.||
BL01245___ylx 91 AAGGCAGCGGAGAAAGAGCAAAAACAGCTTTTGGAAGAAACCGAGAATAC 140
BSNT_02684___ 150 CTTGGCGGCATTTCTGCTTGAATTAAAAGAAGAAAATGAGAAACT----- 194
.|||.|.||.|||.||.|.||.||||||||.||||||||.|||||
BL01245___ylx 141 ATTGACCGCTTTTTTGATGGAGTTAAAAGACGAAAATGAAAAACTCGTTC 190
BSNT_02684___ 195 ----GAT------------AGAAAATAAAGCTTCATCTGCAAGTC---AA 225
||| .||||| |.|||..|| |||.| ||
BL01245___ylx 191 AAGAGATTCGGGCGAATGCCGAAAA-AGAGCCGCA-----AAGACCGGAA 234
BSNT_02684___ 226 TCAGA---TGAAGAATCC----CAAAAGTCAGGCCTTCAGACCTCTGAA- 267
.||.| |||| |.||| ||||...|.|.||||| |.|||
BL01245___ylx 235 ACACAGCCTGAA-ATTCCCGCTCAAACCCCCGTCCTTC------CGGAAG 277
BSNT_02684___ 268 ---ACATATCAAGAGCGGGATCCAGTCCAAGAGGCAGAGAATCTTCCTGA 314
||..||| |||.|||| .||.| |||
BL01245___ylx 278 CGGACGAATC----GCGCGATC----------TGCCG-----CTT----- 303
BSNT_02684___ 315 ACATATTGAAGGTCTGATTACAGAGGTTGACC--GTCG-GGAAGAGCTCG 361
||.||.||||...||||.|..|||||.||.| |..| |||.||||||
BL01245___ylx 304 -CACATCGAAGCGATGATCAATGAGGTGGAGCAGGAAGAGGATGAGCTC- 351
BSNT_02684___ 362 TAAACA----GTG-AGG-----TCCA-ATCATTTGAAG-ACCAGGTCATA 399
||.|| |.| ||| |||| |||.|.||||| |..||.|| |.
BL01245___ylx 352 -AATCAAAAGGAGCAGGAAGCATCCATATCCTATGAAGAAGAAGCTC-TC 399
BSNT_02684___ 400 GAATTATATGAACAGGG---ATATTCGGCAAGTCAAATTGCCCAGA-AAA 445
|.||||||||||.|||| .|.|.||| || .||||.| |.||| |..
BL01245___ylx 400 GCATTATATGAAAAGGGGCTCTCTCCGG--AG-GAAATCG-CAAGACAGC 445
BSNT_02684___ 446 TGAAGAGCGGAAAGACAGAAATCGAGCTATTTTTAAAATTTCGCTCCAAA 495
||||.|||||.||.||||||||||||||.||.|||||||||||| ..|||
BL01245___ylx 446 TGAAAAGCGGGAAAACAGAAATCGAGCTTTTCTTAAAATTTCGC-GGAAA 494
BSNT_02684___ 496 GGT-GTAAAGGATTCTTGA 513
|.| ..|||.|||||||||
BL01245___ylx 495 GCTCAAAAACGATTCTTGA 513
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