Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02687 and BL01243
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:24
# Commandline: needle
# -asequence dna-align/BSNT_02687___tsf.1.5803.seq
# -bsequence dna-align/BL01243___tsf.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02687___tsf-BL01243___tsf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02687___tsf-BL01243___tsf.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02687___tsf
# 2: BL01243___tsf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 889
# Identity: 738/889 (83.0%)
# Similarity: 738/889 (83.0%)
# Gaps: 14/889 ( 1.6%)
# Score: 3078.0
#
#
#=======================================
BSNT_02687___ 1 ATGGCAATTACTGCACAGCAA--GTAAAAGAACTGCGTGAAAAAACTGGC 48
||||||||||||||||| || ||||||||.||.||.||||||||||||
BL01243___tsf 1 ATGGCAATTACTGCACA--AATGGTAAAAGAGCTTCGCGAAAAAACTGGC 48
BSNT_02687___ 49 GCGGGCATGATGGATTGTAAAAAAGCGTTAACTGAAACTGACGGAGATAT 98
||.|||||||||||.||.||.|||||||||||||||||||||||..|.||
BL01243___tsf 49 GCAGGCATGATGGACTGCAAGAAAGCGTTAACTGAAACTGACGGCAACAT 98
BSNT_02687___ 99 GGACAAAGCAATTGACCTTTTAAGAGAAAAAGGGATTGCAAAAGCAGCGA 148
|||.|||||.||.||.|||.|||||||||||||.||.|||||.||.||.|
BL01243___tsf 99 GGATAAAGCGATCGATCTTCTAAGAGAAAAAGGAATCGCAAAGGCTGCCA 148
BSNT_02687___ 149 AAAAAGCTGACCGTATCGCAGCAGAAGGTTCTACTCTTATTAAAACTGAC 198
|||||||||||||.|||||.||.|||||.|..|||.|.||.|||||.|||
BL01243___tsf 149 AAAAAGCTGACCGCATCGCGGCTGAAGGCTTGACTTTGATCAAAACCGAC 198
BSNT_02687___ 199 GGCAACAAAGGCGTTATCCTAGAAGTAAACTCTGAAACTGATTTCGTTGC 248
|||||||.|||||||||.||.|||||.|||||||||||.||.||||||||
BL01243___tsf 199 GGCAACACAGGCGTTATTCTTGAAGTGAACTCTGAAACGGACTTCGTTGC 248
BSNT_02687___ 249 GAAAAACGAAGGTTTTAAAGAGCTTCTTAAC-ACTTTAGCTGACCACCTT 297
||||||||||||.||.||.||||||.|.||| || .|.|||||||||.||
BL01243___tsf 249 GAAAAACGAAGGCTTCAAGGAGCTTTTGAACGAC-CTGGCTGACCACATT 297
BSNT_02687___ 298 CTTGCAAACACGCC----AGCTGATGTTGAAGAAGCAATGGGCCAAAAAA 343
||.||..|.|.||| ||| |||||||..||.|||||.|||||||
BL01243___tsf 298 CTGGCTGAAAAGCCTGAAAGC----GTTGAAGCTGCTATGGGTCAAAAAA 343
BSNT_02687___ 344 TGGAAAATGGCTCAACTGTTGAAGAGTACATCACAAGCGCAGTTGCTAAA 393
|||..||.||.||||||||.|||||.||||||||||||||.|||||||||
BL01243___tsf 344 TGGCTAACGGTTCAACTGTAGAAGAATACATCACAAGCGCGGTTGCTAAA 393
BSNT_02687___ 394 ATCGGTGAGAAAATCACTCTTCGCCGCTTTACAGTTCTTACAAAAGACGA 443
|||||.||.||||||||.|||||||||||..|.||.||.|||||||.|||
BL01243___tsf 394 ATCGGAGAAAAAATCACGCTTCGCCGCTTCGCTGTCCTGACAAAAGGCGA 443
BSNT_02687___ 444 CAGCTCTGCATTCGGTGCTTACCTTCACATGGGCGGCCGCATCGGTGTAT 493
...|.||||||||||.||.|||||.|||||||||||....|||||.||||
BL01243___tsf 444 TGACGCTGCATTCGGCGCATACCTGCACATGGGCGGAAAAATCGGCGTAT 493
BSNT_02687___ 494 TAACTGTTCTCAACGGTACAACTGATGAAGAAACTGCGAAAGATATCGCA 543
|.|||||.||.|||||.||||||||.||||||||.||.|.|||.||||||
BL01243___tsf 494 TGACTGTCCTTAACGGCACAACTGACGAAGAAACAGCAAGAGACATCGCA 543
BSNT_02687___ 544 ATGCACGTTGCTGCGGTTAACCCTCGTTACATTTCTCGTGATCAAGTATC 593
|||||||||||.||.||.||||||||.|.||||||.||.||.|||||.||
BL01243___tsf 544 ATGCACGTTGCAGCTGTAAACCCTCGCTTCATTTCCCGCGACCAAGTGTC 593
BSNT_02687___ 594 TGAAGAAGAAACAAATCATGAGCGTCAAATCTTAACTCAGCAAGCCCTCC 643
.|||||||||.|.||.|..|||||..|||||||.||||||||.||.||.|
BL01243___tsf 594 AGAAGAAGAAGCGAACCGCGAGCGCGAAATCTTGACTCAGCAGGCGCTTC 643
BSNT_02687___ 644 AAGAAGGCAAACCTGAAAACATCGTAGCGAAAATGGTTGAAGGCCGTCTG 693
||||||||||.||||||||||||||.||.|||||||||||||||||.|||
BL01243___tsf 644 AAGAAGGCAAGCCTGAAAACATCGTCGCAAAAATGGTTGAAGGCCGCCTG 693
BSNT_02687___ 694 AACAAATTCTTCGAAGAAATTTGTCTATTAGACCAAGCGTTCGTTAAAAA 743
|||||||..|||||||||||.||.||..|.||.|||||||||||||||||
BL01243___tsf 694 AACAAATATTTCGAAGAAATCTGCCTGCTTGATCAAGCGTTCGTTAAAAA 743
BSNT_02687___ 744 CCCAGATGAAAAAGTGAAACAAGTTATTGCAGCGAAAAACGCTACTGTTC 793
|||.|||||||||||||||||.||..||||.|||||||||||.||.|||.
BL01243___tsf 744 CCCGGATGAAAAAGTGAAACAGGTCGTTGCTGCGAAAAACGCAACGGTTG 793
BSNT_02687___ 794 AAACTTTTGTCCGCTATGAAGTTGGAGAAGGCATCGAAAAACGTCAAGAA 843
||||.||.||||||||.||||||||||||||.|||||||||||.||||||
BL01243___tsf 794 AAACGTTCGTCCGCTACGAAGTTGGAGAAGGTATCGAAAAACGCCAAGAA 843
BSNT_02687___ 844 AACTTTGCTGAAGAAGTAATGAACCAAGTGAAAAAATAA 882
|||||||||||||||||.|||||||||||||||||||||
BL01243___tsf 844 AACTTTGCTGAAGAAGTTATGAACCAAGTGAAAAAATAA 882
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