Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02693 and BL01237
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:24
# Commandline: needle
# -asequence dna-align/BSNT_02693___dxr.1.5803.seq
# -bsequence dna-align/BL01237___dxr.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02693___dxr-BL01237___dxr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02693___dxr-BL01237___dxr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02693___dxr
# 2: BL01237___dxr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1170
# Identity: 846/1170 (72.3%)
# Similarity: 846/1170 (72.3%)
# Gaps: 36/1170 ( 3.1%)
# Score: 2927.0
#
#
#=======================================
BSNT_02693___ 1 TTGAAAAATATTTGTCTTTTAGGAGCAACAGGATCAATCGGCGAACAGAC 50
|||||.||.||.|||||.||.|||||.|||||.||.||.||.||||||||
BL01237___dxr 1 TTGAAGAACATATGTCTATTGGGAGCGACAGGCTCCATAGGAGAACAGAC 50
BSNT_02693___ 51 TCTTGATGTACTGCGT----GCACATCAAGATCAATTTCAGCTGGTATCT 96
.|||||||| |.| ||.|||.|.|||.|.||||.||||....|.
BL01237___dxr 51 GCTTGATGT----CATCAAAGCGCATGACGATAAGTTTCGGCTGACCGCC 96
BSNT_02693___ 97 ATGTCGTTTGGCAGAAATATTGATAAGGCCGTTCCAATGATTGAGGTCTT 146
|||.|.||.||||.|||....||.||.||.|....|||.|||||...|||
BL01237___dxr 97 ATGACTTTCGGCAAAAACGCCGAAAAAGCGGCAGAAATCATTGAAACCTT 146
BSNT_02693___ 147 TCAGCCGAAGTTTGTCTCTGTCGGTGATCTGGATACATATCATAAATTAA 196
|.|.|||||||.|||....|||||.|||..|.||||||||.|.|.|||||
BL01237___dxr 147 TAAACCGAAGTATGTAGGCGTCGGGGATGAGCATACATATGAAACATTAA 196
BSNT_02693___ 197 AACA-AATGTCTTTTTCTT-----TTGAATGCCAAATCGGGTTGGGAGAA 240
|||| .|| |||||.||.| ||.| |||..|||.|.||.||.
BL01237___dxr 197 AACAGCAT-TCTTTCTCCTACACCTTTA-----AAACAGGGATCGGGGAG 240
BSNT_02693___ 241 GAAGGACTGATAGAAGCAGCAGTGATGGAGGAGGTTGACATTGTTGTCAA 290
||||...|.||.|||||.||.||.||...|||.|..||.||.||.|||||
BL01237___dxr 241 GAAGCTTTAATCGAAGCGGCCGTTATCCCGGAAGCGGATATCGTCGTCAA 290
BSNT_02693___ 291 CGCTTTGCTTGGAAGCGTCGGTCTTATCCCGACGTTAAAGGCGATTGAAC 340
.|||.|..|.||.||||||||||||.|.|||||.|||||||||||.||.|
BL01237___dxr 291 TGCTCTCGTCGGCAGCGTCGGTCTTCTTCCGACTTTAAAGGCGATGGAGC 340
BSNT_02693___ 341 AGAAAAAAACAATTGCGCTTGCAAATAAGGAAACTCTTGTCACTGCAGGG 390
|.|||||||||||||||||||||||||||||||||||.||.||.||.||.
BL01237___dxr 341 ATAAAAAAACAATTGCGCTTGCAAATAAGGAAACTCTCGTGACAGCCGGT 390
BSNT_02693___ 391 CATATAGTAAAAGAACATGCTAAGAAATATGATGTTCCGCTGCTGCCTGT 440
||||||||.||||||||.||..|.|||||.|||||.|||||.|||||.||
BL01237___dxr 391 CATATAGTGAAAGAACACGCCCAAAAATACGATGTCCCGCTCCTGCCCGT 440
BSNT_02693___ 441 TGACAGTGAGCATTCAGCCATTTTTCAAGCTCTTCAAGGCGAACAGGTTA 490
.|||||.||.|||||.||.|||||.||.||.|||||.||.|||.|....|
BL01237___dxr 441 CGACAGCGAACATTCCGCGATTTTCCAGGCCCTTCAGGGGGAAAATCCGA 490
BSNT_02693___ 491 AAAACATTGAACGCCTCATCATTACGGCATCCGGCGGAAGTTTTCGGGAC 540
|..|.||..||||.||.|||.|.|||||.||.|||||.||.||..|||||
BL01237___dxr 491 AGCATATCAAACGGCTGATCGTCACGGCTTCAGGCGGCAGCTTCAGGGAC 540
BSNT_02693___ 541 AAGACGCGGGAGGAGCTCGAATCAGTAACTGTTGAAGATGCATTAAAACA 590
|..||..||..|||.||.|||...||.||.||.|||||.||..|.||.||
BL01237___dxr 541 AGAACAAGGCGGGAACTTGAAGGCGTCACAGTGGAAGAAGCCCTCAATCA 590
BSNT_02693___ 591 TCCAAACTGGTCAATGGGTGCAAAAATTACAATTGATTCGGCTACAATGA 640
||||||.|||||.||||||||||||||.||.||.||||||||||||||||
BL01237___dxr 591 TCCAAATTGGTCGATGGGTGCAAAAATCACGATCGATTCGGCTACAATGA 640
BSNT_02693___ 641 TGAATAAGGGATTAGAGGTGATCGAGGCACACTGGCTTTTCGATGTACCT 690
|||||||.|||.|.|||||.||.||.||.||||||||.||.|||.|.||.
BL01237___dxr 641 TGAATAAAGGACTCGAGGTTATTGAAGCCCACTGGCTGTTTGATCTGCCC 690
BSNT_02693___ 691 TATGAACAAATTGATGTGGTTTTACATAAGGAGAGCATCATCCATTCAAT 740
|||||.||.||.|||||..|..|.||.||.||.|||||.||.||||||||
BL01237___dxr 691 TATGACCAGATCGATGTCCTCCTTCACAAAGAAAGCATTATTCATTCAAT 740
BSNT_02693___ 741 GGTTGAGTTCCATGATAAAAGTGTGATCGCACAGCTCGGAACTCCGGATA 790
||||||.|||||.||....||.||.|||||.|||||.||.||.||.||||
BL01237___dxr 741 GGTTGAATTCCACGACCGCAGCGTCATCGCCCAGCTTGGCACACCTGATA 790
BSNT_02693___ 791 TGAGAGTCCCCATTCAATATGCGCTCACTTATCCTGACCGATTGCCATTA 840
|||||||.||.||||||||||||||||...||||.||.||..||||.||.
BL01237___dxr 791 TGAGAGTGCCGATTCAATATGCGCTCAGCCATCCGGAACGCCTGCCGTTT 840
BSNT_02693___ 841 CCAGATGCGAAAAGGCTTGAATTATGGGAAATCGG-CAGCCTTCATTTTG 889
...||.||.|||...||.||..|.||||||.|||| ||| ||..||||||
BL01237___dxr 841 AATGAAGCAAAATCCCTCGATCTCTGGGAAGTCGGACAG-CTGAATTTTG 889
BSNT_02693___ 890 AGAAAGCTGATTTTGACAGGTTCCGATGCTTACAATTTGCTTTTGAATCA 939
...|||||||||||||.||||||||.|||||||||||.||||.|||||||
BL01237___dxr 890 CCCAAGCTGATTTTGAAAGGTTCCGCTGCTTACAATTCGCTTATGAATCA 939
BSNT_02693___ 940 GGTAAAATAGGAGGAACAATGCCGACAGTGCTAAATGCGGCAAATGAAGT 989
|||||||||||.||.|||||||||||.||..||||.|||||.||.||.|.
BL01237___dxr 940 GGTAAAATAGGCGGTACAATGCCGACTGTTTTAAACGCGGCCAACGAGGA 989
BSNT_02693___ 990 AGCTGTCGCTGCCTTTTTAGCTGGCAAGA-TACCGTTTTTGGCTATTGAA 1038
|||.||.||.||.|||.|..|.||||.|| |.||.||.|||| .||.|||
BL01237___dxr 990 AGCCGTTGCGGCATTTCTTTCGGGCAGGATTTCCTTTCTTGG-AATAGAA 1038
BSNT_02693___ 1039 GACTGTATCGAAAAGGCACT--AACCCGCCATCA----ATTACTGAAAAA 1082
|||...||.||||||||..| || |||||||| ||..| |||
BL01237___dxr 1039 GACATCATTGAAAAGGCTTTGGAA--CGCCATCAGGTGATCGC----AAA 1082
BSNT_02693___ 1083 ACCGAGCCTGGCGGACATTCAAGAAGTGGACAAAGATACCCGGGGATACG 1132
.||||||||....||.||.|..||||||||||||||..||.|....|..|
BL01237___dxr 1083 GCCGAGCCTTCAAGAGATCCGTGAAGTGGACAAAGACGCCAGAAAGTTTG 1132
BSNT_02693___ 1133 TCAATTCAATACTCACATAA 1152
||.|..||.|||||||||||
BL01237___dxr 1133 TCCAAACATTACTCACATAA 1152
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