Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02696 and BL01235

See Amino acid alignment / Visit BSNT_02696 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:25
# Commandline: needle
#    -asequence dna-align/BSNT_02696___proS.1.5803.seq
#    -bsequence dna-align/BL01235___proS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02696___proS-BL01235___proS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02696___proS-BL01235___proS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02696___proS
# 2: BL01235___proS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1758
# Identity:    1295/1758 (73.7%)
# Similarity:  1295/1758 (73.7%)
# Gaps:         102/1758 ( 5.8%)
# Score: 4687.5
# 
#
#=======================================

BSNT_02696___      1 ATGAGACAAAGCTTGACGCTTATTCCTACGCTCCGTGAAGTTCCAGCTGA     50
                     ||||||||.|||..|||..|.||||||||||||||.|||||.||.|||||
BL01235___pro      1 ATGAGACAGAGCAGGACTTTAATTCCTACGCTCCGCGAAGTGCCGGCTGA     50

BSNT_02696___     51 TGCCGAAGCAAAAAGTCATCAGCTTCTTCTGAGAGCAGGATTTATCAGAC    100
                     |||.|||||.|||||.||||||||||||||.||||||||.||||||||||
BL01235___pro     51 TGCTGAAGCGAAAAGCCATCAGCTTCTTCTCAGAGCAGGGTTTATCAGAC    100

BSNT_02696___    101 AGAATACGAGCGGGGTATACAGCTATATGCCTCTTGCGTATAAGGTGATT    150
                     |.||.||.|||||.|||||||||||||||||||||||..||||.||.|||
BL01235___pro    101 AAAACACAAGCGGTGTATACAGCTATATGCCTCTTGCCAATAAAGTCATT    150

BSNT_02696___    151 CAAAACATTCAGCAG-ATTGTTCGAGAGGAAATGGAGAAAATTGATGCCG    199
                     ||.||.||.||| || |||||.||.||.||||||||||||||..||||||
BL01235___pro    151 CATAAAATCCAG-AGCATTGTCCGCGAAGAAATGGAGAAAATCAATGCCG    199

BSNT_02696___    200 TAGAAATGCTCATGCCCGCATTGCAGCAGGCAGAGACATGGCAGGAATCA    249
                     |.||||||||.|||||.||..|.||||||||.||.||.|||||||||||.
BL01235___pro    200 TCGAAATGCTGATGCCGGCGCTCCAGCAGGCGGAAACTTGGCAGGAATCG    249

BSNT_02696___    250 GGCAGATGGTATACGTATGGTCCCGAACTGATGAGACTAAAAGACCGTCA    299
                     ||.||||||||||||||.|||||.||.||.|||||.||.||||||||.||
BL01235___pro    250 GGAAGATGGTATACGTACGGTCCTGAGCTCATGAGGCTGAAAGACCGCCA    299

BSNT_02696___    300 TGGCCGTGAATTTGCTTTAGGGGCAACGCATGAAGAGGTTATCA----CT    345
                     .||||||||||||||..||||.|||||.||.||||||||.||||    |.
BL01235___pro    300 CGGCCGTGAATTTGCCCTAGGCGCAACACACGAAGAGGTCATCACAAGCA    349

BSNT_02696___    346 TCGCTTGTTC-GCGATGAGGTTAAATCTTATAAGCGTCTCCCTCTGACTC    394
                     |||     || |.|||||.||.|||||.||.|||||.||.||.|||||.|
BL01235___pro    350 TCG-----TCAGAGATGAAGTGAAATCGTACAAGCGCCTTCCGCTGACCC    394

BSNT_02696___    395 TTTATCAAATTCAGTCTAAGTTCAGAGATGAAAAACGTCCTCGCTTCGGT    444
                     ||||.||.||.||.||.||||||.|.||||||||.||.||.|||||||||
BL01235___pro    395 TTTACCAGATCCAATCGAAGTTCCGCGATGAAAAGCGCCCGCGCTTCGGT    444

BSNT_02696___    445 TTGTTAAGAGGCCGCGAATTTATTATGAAGGATGCGTACTCTTTCCATGC    494
                     .||||.||||||||.|||||.||.||||||||||||||.||.||||||.|
BL01235___pro    445 CTGTTGAGAGGCCGGGAATTCATCATGAAGGATGCGTATTCCTTCCATTC    494

BSNT_02696___    495 ATCTGCAGAGAGCCTGGATGAAACGTATCAA-AAAATGTACGAGGCCTAT    543
                     .||.||.||.|||||.||||||||||| ||| .|.|||||..||||.|||
BL01235___pro    495 CTCCGCCGAAAGCCTTGATGAAACGTA-CAATGATATGTATCAGGCGTAT    543

BSNT_02696___    544 TCTAATATTTTTGCCCGCTGCGGCATTAATGTAAGACCTGTTATCGCTGA    593
                     .|.|||.|.|||.|.|||||||||.|.|||.|.|||||.||.||.||.||
BL01235___pro    544 ACGAATGTGTTTACGCGCTGCGGCCTGAATTTCAGACCGGTCATTGCAGA    593

BSNT_02696___    594 TTCAGGCGCAATGGGAGGAAAGGATACGCACGAATTTATGGCACTTTCTG    643
                     .||||||||.|||||.|||||||||||.||.||||||||||||  ||.|.
BL01235___pro    594 CTCAGGCGCGATGGGCGGAAAGGATACCCATGAATTTATGGCA--TTGTC    641

BSNT_02696___    644 CGA--TCGGAGAGGATACGATTGCGTATTCTGATGAATC-ACAGTACGCG    690
                     |||  ||||.||||||||.|||||||||||||||.|.|| .|| |||||.
BL01235___pro    642 CGATGTCGGTGAGGATACAATTGCGTATTCTGATCAGTCTTCA-TACGCC    690

BSNT_02696___    691 GCTAATATCGAGATGGCTGAAGTTCTTCACCAGGAAGTTCCTTCAGAT--    738
                     ||.||.||.||.|||||||||||      ..|||||      .|||||  
BL01235___pro    691 GCCAACATTGAAATGGCTGAAGT------GAAGGAA------ACAGATGC    728

BSNT_02696___    739 ----------GAAGAGCCTAAAGCTCTAGAGAAGGTTCATACGCCTAACG    778
                               |.|||....||||..||..||.|.||.||.||.|||...|
BL01235___pro    729 CGGCGAGCAGGCAGAAATGAAAGAGCTGCAGGAAGTCCACACACCTTCGG    778

BSNT_02696___    779 TGAAAACAATCGAAGAACTGACTGC-GTTCTTACAGG--TTTCGGCTGAA    825
                     |.|||||.||||||||..|..|.|| .|||||   ||  |.||..|...|
BL01235___pro    779 TCAAAACGATCGAAGAGGTTGCCGCATTTCTT---GGCATATCCCCGTCA    825

BSNT_02696___    826 GCGTGCATTAAGTCAGTATTGTTTAAAGCTGATGACCGTTTTGTCTTAGT    875
                     |..||||||||.|||.|..||.|.|||||.||.|..|||||||||.|.||
BL01235___pro    826 GACTGCATTAAATCAATGCTGATGAAAGCAGACGGACGTTTTGTCCTCGT    875

BSNT_02696___    876 GCTTGTA--AGAGGGGATCATGAAGTTAACGATATTAAAGTGAAAAACTT    923
                      |||| |  |||||||||||.|||||.||.|||.||||.|||||||||.|
BL01235___pro    876 -CTTG-ACGAGAGGGGATCACGAAGTCAATGATGTTAAGGTGAAAAACCT    923

BSNT_02696___    924 GCTTCATGCAGAAGTTGTAGAGCTTGCTA-CACATGAAGAGGTCATTCAG    972
                     ||||||.||||||.|..|.||..|.||.| |.| .||||||||  |.|||
BL01235___pro    924 GCTTCAAGCAGAAATAATCGAATTCGCGAGCGC-CGAAGAGGT--TGCAG    970

BSNT_02696___    973 CAGCT---CGGAACAGAGCCAGGCTTTGTAGGCCCTGTCGGTATTCATCA   1019
                      ||.|   .||.||.||.||.||.|||||.||.||.||.||..|..|.|.
BL01235___pro    971 -AGATAACAGGCACTGAACCCGGTTTTGTCGGACCGGTGGGGCTCGACCG   1019

BSNT_02696___   1020 GGATGTGGAAGTATATGCCGATCAAGCTGTGAAAGCAATGGTTAATGCTG   1069
                     .||..|.|||.|.|.|||.||....||||||||.||.||||..||.||.|
BL01235___pro   1020 CGAAATCGAAATCTTTGCAGACTTTGCTGTGAAGGCGATGGCAAACGCAG   1069

BSNT_02696___   1070 TTGCCGGGGCAAATGAAGGAGATCATCATTATAAAAATGTCAATGTGAAT   1119
                     ..||.||.||.|||.||..||||.|.||||||.||||.||.|||.|.|..
BL01235___pro   1070 CAGCTGGAGCGAATAAAACAGATTACCATTATCAAAACGTGAATATCAGC   1119

BSNT_02696___   1120 CGTGACGCGCA-AAT-TAAAGA-ATTTGCTGATCTTCGTTTTATTAAAGA   1166
                     ||.||.||||| ||| |   || |||.||.|||||.||.|||||..|.||
BL01235___pro   1120 CGGGATGCGCACAATGT---GACATTCGCCGATCTCCGCTTTATCCAGGA   1166

BSNT_02696___   1167 AGGTGATCCTTCACCAGACGGCAAGGGAACGATCCGTTTTGCTGAGGGAA   1216
                     |||.||.||||||||.||.||.||.|||||||||||||||||..|.||||
BL01235___pro   1167 AGGAGACCCTTCACCGGATGGAAAAGGAACGATCCGTTTTGCAAAAGGAA   1216

BSNT_02696___   1217 TCGAAGTCGGACAAGTCTTTAAGCTCGGAACACGCTATTCAGAAGCGATG   1266
                     ||||||||||||||||||||||||||||.||.||||||||.|||||||||
BL01235___pro   1217 TCGAAGTCGGACAAGTCTTTAAGCTCGGCACCCGCTATTCTGAAGCGATG   1266

BSNT_02696___   1267 AATGCGACATATTTAGATGAAAACGGACGCGCGCAGCCAATGCTGATGGG   1316
                     .|.||.|||||..|.|||||||||||||||||.|||||.|||||||||||
BL01235___pro   1267 GACGCCACATACCTTGATGAAAACGGACGCGCTCAGCCGATGCTGATGGG   1316

BSNT_02696___   1317 CTGTTACGGAATCGGTGTGTCAAGAACGCTTTCTGCTATTGCTGAACAGC   1366
                     |||.||.||||||||..|.||..|.||||||||.||.||.|.|||.||||
BL01235___pro   1317 CTGCTATGGAATCGGGATTTCCCGGACGCTTTCGGCCATCGTTGAGCAGC   1366

BSNT_02696___   1367 ATCACGACGAAAAAGGCTTAATATGGCCAAAAAGC-----GTTGCGCCGT   1411
                     ||||.|||||.||||||||.||.|||||     ||     ||..||||||
BL01235___pro   1367 ATCATGACGATAAAGGCTTGATCTGGCC-----GCTGGAAGTGACGCCGT   1411

BSNT_02696___   1412 ACGATCTTCATATTCTTGCTTTGAACATGAAAAACGATGGGCAAAGAGAG   1461
                     |.||.||.|||||.||.||..|.||.||||||||.||.|.||||....||
BL01235___pro   1412 ATGACCTGCATATCCTCGCGCTTAATATGAAAAATGACGCGCAAGTTCAG   1461

BSNT_02696___   1462 CTTGCTGAAAAGCTGTATGCCGATTTAAAAGCGGAAGGCTATGAAGTGCT   1511
                     |||||.|||||||||||||..||.||.||||||.|.||||||||.||.||
BL01235___pro   1462 CTTGCCGAAAAGCTGTATGAAGAATTTAAAGCGAACGGCTATGACGTACT   1511

BSNT_02696___   1512 CTATGATGACCGTGCTGAGCGTGCCGGCGTAAAATTCGCTGATTCAGATT   1561
                     .|.||||||||||||.||.||.||||||||.|||||.||.|||||.||||
BL01235___pro   1512 GTTTGATGACCGTGCCGAACGGGCCGGCGTTAAATTTGCAGATTCCGATT   1561

BSNT_02696___   1562 TAATCGGCCTTCCAATCCGCATCACTGTCGGAAAACGAGCTGACGAAGGA   1611
                     |.|||||.||.||.|||||||||||.|||||||||.|||||||||||||.
BL01235___pro   1562 TGATCGGTCTGCCGATCCGCATCACGGTCGGAAAAAGAGCTGACGAAGGC   1611

BSNT_02696___   1612 ATCGTCGAAGTGAAAATTCGTCAAACTGGTGAGTCAACTGAGATTTCAGT   1661
                     .|.|||||||||||.||.||..||||.||.||.||...|||.||..|.|.
BL01235___pro   1612 GTTGTCGAAGTGAAGATCCGCAAAACCGGAGAATCCTTTGAAATCGCTGC   1661

BSNT_02696___   1662 AGACGAATTATCTGCGTTTATC-AGCAAGCAGTAA---------------   1695
                     .||.||..|.|.||..|||||| |..||..|||.|               
BL01235___pro   1662 TGATGAGCTGTTTGACTTTATCGAAAAACAAGTCAAGAGCTTATCTTCTC   1711

BSNT_02696___   1695 --------   1695
                             
BL01235___pro   1712 ACTCTTAA   1719


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