Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02696 and BL01235
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:25
# Commandline: needle
# -asequence dna-align/BSNT_02696___proS.1.5803.seq
# -bsequence dna-align/BL01235___proS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02696___proS-BL01235___proS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02696___proS-BL01235___proS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02696___proS
# 2: BL01235___proS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1758
# Identity: 1295/1758 (73.7%)
# Similarity: 1295/1758 (73.7%)
# Gaps: 102/1758 ( 5.8%)
# Score: 4687.5
#
#
#=======================================
BSNT_02696___ 1 ATGAGACAAAGCTTGACGCTTATTCCTACGCTCCGTGAAGTTCCAGCTGA 50
||||||||.|||..|||..|.||||||||||||||.|||||.||.|||||
BL01235___pro 1 ATGAGACAGAGCAGGACTTTAATTCCTACGCTCCGCGAAGTGCCGGCTGA 50
BSNT_02696___ 51 TGCCGAAGCAAAAAGTCATCAGCTTCTTCTGAGAGCAGGATTTATCAGAC 100
|||.|||||.|||||.||||||||||||||.||||||||.||||||||||
BL01235___pro 51 TGCTGAAGCGAAAAGCCATCAGCTTCTTCTCAGAGCAGGGTTTATCAGAC 100
BSNT_02696___ 101 AGAATACGAGCGGGGTATACAGCTATATGCCTCTTGCGTATAAGGTGATT 150
|.||.||.|||||.|||||||||||||||||||||||..||||.||.|||
BL01235___pro 101 AAAACACAAGCGGTGTATACAGCTATATGCCTCTTGCCAATAAAGTCATT 150
BSNT_02696___ 151 CAAAACATTCAGCAG-ATTGTTCGAGAGGAAATGGAGAAAATTGATGCCG 199
||.||.||.||| || |||||.||.||.||||||||||||||..||||||
BL01235___pro 151 CATAAAATCCAG-AGCATTGTCCGCGAAGAAATGGAGAAAATCAATGCCG 199
BSNT_02696___ 200 TAGAAATGCTCATGCCCGCATTGCAGCAGGCAGAGACATGGCAGGAATCA 249
|.||||||||.|||||.||..|.||||||||.||.||.|||||||||||.
BL01235___pro 200 TCGAAATGCTGATGCCGGCGCTCCAGCAGGCGGAAACTTGGCAGGAATCG 249
BSNT_02696___ 250 GGCAGATGGTATACGTATGGTCCCGAACTGATGAGACTAAAAGACCGTCA 299
||.||||||||||||||.|||||.||.||.|||||.||.||||||||.||
BL01235___pro 250 GGAAGATGGTATACGTACGGTCCTGAGCTCATGAGGCTGAAAGACCGCCA 299
BSNT_02696___ 300 TGGCCGTGAATTTGCTTTAGGGGCAACGCATGAAGAGGTTATCA----CT 345
.||||||||||||||..||||.|||||.||.||||||||.|||| |.
BL01235___pro 300 CGGCCGTGAATTTGCCCTAGGCGCAACACACGAAGAGGTCATCACAAGCA 349
BSNT_02696___ 346 TCGCTTGTTC-GCGATGAGGTTAAATCTTATAAGCGTCTCCCTCTGACTC 394
||| || |.|||||.||.|||||.||.|||||.||.||.|||||.|
BL01235___pro 350 TCG-----TCAGAGATGAAGTGAAATCGTACAAGCGCCTTCCGCTGACCC 394
BSNT_02696___ 395 TTTATCAAATTCAGTCTAAGTTCAGAGATGAAAAACGTCCTCGCTTCGGT 444
||||.||.||.||.||.||||||.|.||||||||.||.||.|||||||||
BL01235___pro 395 TTTACCAGATCCAATCGAAGTTCCGCGATGAAAAGCGCCCGCGCTTCGGT 444
BSNT_02696___ 445 TTGTTAAGAGGCCGCGAATTTATTATGAAGGATGCGTACTCTTTCCATGC 494
.||||.||||||||.|||||.||.||||||||||||||.||.||||||.|
BL01235___pro 445 CTGTTGAGAGGCCGGGAATTCATCATGAAGGATGCGTATTCCTTCCATTC 494
BSNT_02696___ 495 ATCTGCAGAGAGCCTGGATGAAACGTATCAA-AAAATGTACGAGGCCTAT 543
.||.||.||.|||||.||||||||||| ||| .|.|||||..||||.|||
BL01235___pro 495 CTCCGCCGAAAGCCTTGATGAAACGTA-CAATGATATGTATCAGGCGTAT 543
BSNT_02696___ 544 TCTAATATTTTTGCCCGCTGCGGCATTAATGTAAGACCTGTTATCGCTGA 593
.|.|||.|.|||.|.|||||||||.|.|||.|.|||||.||.||.||.||
BL01235___pro 544 ACGAATGTGTTTACGCGCTGCGGCCTGAATTTCAGACCGGTCATTGCAGA 593
BSNT_02696___ 594 TTCAGGCGCAATGGGAGGAAAGGATACGCACGAATTTATGGCACTTTCTG 643
.||||||||.|||||.|||||||||||.||.|||||||||||| ||.|.
BL01235___pro 594 CTCAGGCGCGATGGGCGGAAAGGATACCCATGAATTTATGGCA--TTGTC 641
BSNT_02696___ 644 CGA--TCGGAGAGGATACGATTGCGTATTCTGATGAATC-ACAGTACGCG 690
||| ||||.||||||||.|||||||||||||||.|.|| .|| |||||.
BL01235___pro 642 CGATGTCGGTGAGGATACAATTGCGTATTCTGATCAGTCTTCA-TACGCC 690
BSNT_02696___ 691 GCTAATATCGAGATGGCTGAAGTTCTTCACCAGGAAGTTCCTTCAGAT-- 738
||.||.||.||.||||||||||| ..||||| .|||||
BL01235___pro 691 GCCAACATTGAAATGGCTGAAGT------GAAGGAA------ACAGATGC 728
BSNT_02696___ 739 ----------GAAGAGCCTAAAGCTCTAGAGAAGGTTCATACGCCTAACG 778
|.|||....||||..||..||.|.||.||.||.|||...|
BL01235___pro 729 CGGCGAGCAGGCAGAAATGAAAGAGCTGCAGGAAGTCCACACACCTTCGG 778
BSNT_02696___ 779 TGAAAACAATCGAAGAACTGACTGC-GTTCTTACAGG--TTTCGGCTGAA 825
|.|||||.||||||||..|..|.|| .||||| || |.||..|...|
BL01235___pro 779 TCAAAACGATCGAAGAGGTTGCCGCATTTCTT---GGCATATCCCCGTCA 825
BSNT_02696___ 826 GCGTGCATTAAGTCAGTATTGTTTAAAGCTGATGACCGTTTTGTCTTAGT 875
|..||||||||.|||.|..||.|.|||||.||.|..|||||||||.|.||
BL01235___pro 826 GACTGCATTAAATCAATGCTGATGAAAGCAGACGGACGTTTTGTCCTCGT 875
BSNT_02696___ 876 GCTTGTA--AGAGGGGATCATGAAGTTAACGATATTAAAGTGAAAAACTT 923
|||| | |||||||||||.|||||.||.|||.||||.|||||||||.|
BL01235___pro 876 -CTTG-ACGAGAGGGGATCACGAAGTCAATGATGTTAAGGTGAAAAACCT 923
BSNT_02696___ 924 GCTTCATGCAGAAGTTGTAGAGCTTGCTA-CACATGAAGAGGTCATTCAG 972
||||||.||||||.|..|.||..|.||.| |.| .|||||||| |.|||
BL01235___pro 924 GCTTCAAGCAGAAATAATCGAATTCGCGAGCGC-CGAAGAGGT--TGCAG 970
BSNT_02696___ 973 CAGCT---CGGAACAGAGCCAGGCTTTGTAGGCCCTGTCGGTATTCATCA 1019
||.| .||.||.||.||.||.|||||.||.||.||.||..|..|.|.
BL01235___pro 971 -AGATAACAGGCACTGAACCCGGTTTTGTCGGACCGGTGGGGCTCGACCG 1019
BSNT_02696___ 1020 GGATGTGGAAGTATATGCCGATCAAGCTGTGAAAGCAATGGTTAATGCTG 1069
.||..|.|||.|.|.|||.||....||||||||.||.||||..||.||.|
BL01235___pro 1020 CGAAATCGAAATCTTTGCAGACTTTGCTGTGAAGGCGATGGCAAACGCAG 1069
BSNT_02696___ 1070 TTGCCGGGGCAAATGAAGGAGATCATCATTATAAAAATGTCAATGTGAAT 1119
..||.||.||.|||.||..||||.|.||||||.||||.||.|||.|.|..
BL01235___pro 1070 CAGCTGGAGCGAATAAAACAGATTACCATTATCAAAACGTGAATATCAGC 1119
BSNT_02696___ 1120 CGTGACGCGCA-AAT-TAAAGA-ATTTGCTGATCTTCGTTTTATTAAAGA 1166
||.||.||||| ||| | || |||.||.|||||.||.|||||..|.||
BL01235___pro 1120 CGGGATGCGCACAATGT---GACATTCGCCGATCTCCGCTTTATCCAGGA 1166
BSNT_02696___ 1167 AGGTGATCCTTCACCAGACGGCAAGGGAACGATCCGTTTTGCTGAGGGAA 1216
|||.||.||||||||.||.||.||.|||||||||||||||||..|.||||
BL01235___pro 1167 AGGAGACCCTTCACCGGATGGAAAAGGAACGATCCGTTTTGCAAAAGGAA 1216
BSNT_02696___ 1217 TCGAAGTCGGACAAGTCTTTAAGCTCGGAACACGCTATTCAGAAGCGATG 1266
||||||||||||||||||||||||||||.||.||||||||.|||||||||
BL01235___pro 1217 TCGAAGTCGGACAAGTCTTTAAGCTCGGCACCCGCTATTCTGAAGCGATG 1266
BSNT_02696___ 1267 AATGCGACATATTTAGATGAAAACGGACGCGCGCAGCCAATGCTGATGGG 1316
.|.||.|||||..|.|||||||||||||||||.|||||.|||||||||||
BL01235___pro 1267 GACGCCACATACCTTGATGAAAACGGACGCGCTCAGCCGATGCTGATGGG 1316
BSNT_02696___ 1317 CTGTTACGGAATCGGTGTGTCAAGAACGCTTTCTGCTATTGCTGAACAGC 1366
|||.||.||||||||..|.||..|.||||||||.||.||.|.|||.||||
BL01235___pro 1317 CTGCTATGGAATCGGGATTTCCCGGACGCTTTCGGCCATCGTTGAGCAGC 1366
BSNT_02696___ 1367 ATCACGACGAAAAAGGCTTAATATGGCCAAAAAGC-----GTTGCGCCGT 1411
||||.|||||.||||||||.||.||||| || ||..||||||
BL01235___pro 1367 ATCATGACGATAAAGGCTTGATCTGGCC-----GCTGGAAGTGACGCCGT 1411
BSNT_02696___ 1412 ACGATCTTCATATTCTTGCTTTGAACATGAAAAACGATGGGCAAAGAGAG 1461
|.||.||.|||||.||.||..|.||.||||||||.||.|.||||....||
BL01235___pro 1412 ATGACCTGCATATCCTCGCGCTTAATATGAAAAATGACGCGCAAGTTCAG 1461
BSNT_02696___ 1462 CTTGCTGAAAAGCTGTATGCCGATTTAAAAGCGGAAGGCTATGAAGTGCT 1511
|||||.|||||||||||||..||.||.||||||.|.||||||||.||.||
BL01235___pro 1462 CTTGCCGAAAAGCTGTATGAAGAATTTAAAGCGAACGGCTATGACGTACT 1511
BSNT_02696___ 1512 CTATGATGACCGTGCTGAGCGTGCCGGCGTAAAATTCGCTGATTCAGATT 1561
.|.||||||||||||.||.||.||||||||.|||||.||.|||||.||||
BL01235___pro 1512 GTTTGATGACCGTGCCGAACGGGCCGGCGTTAAATTTGCAGATTCCGATT 1561
BSNT_02696___ 1562 TAATCGGCCTTCCAATCCGCATCACTGTCGGAAAACGAGCTGACGAAGGA 1611
|.|||||.||.||.|||||||||||.|||||||||.|||||||||||||.
BL01235___pro 1562 TGATCGGTCTGCCGATCCGCATCACGGTCGGAAAAAGAGCTGACGAAGGC 1611
BSNT_02696___ 1612 ATCGTCGAAGTGAAAATTCGTCAAACTGGTGAGTCAACTGAGATTTCAGT 1661
.|.|||||||||||.||.||..||||.||.||.||...|||.||..|.|.
BL01235___pro 1612 GTTGTCGAAGTGAAGATCCGCAAAACCGGAGAATCCTTTGAAATCGCTGC 1661
BSNT_02696___ 1662 AGACGAATTATCTGCGTTTATC-AGCAAGCAGTAA--------------- 1695
.||.||..|.|.||..|||||| |..||..|||.|
BL01235___pro 1662 TGATGAGCTGTTTGACTTTATCGAAAAACAAGTCAAGAGCTTATCTTCTC 1711
BSNT_02696___ 1695 -------- 1695
BL01235___pro 1712 ACTCTTAA 1719
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