Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02699 and BL01227
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence dna-align/BSNT_02699___nusA.1.5803.seq
# -bsequence dna-align/BL01227___nusA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02699___nusA-BL01227___nusA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02699___nusA-BL01227___nusA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02699___nusA
# 2: BL01227___nusA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1126
# Identity: 902/1126 (80.1%)
# Similarity: 902/1126 (80.1%)
# Gaps: 17/1126 ( 1.5%)
# Score: 3597.5
#
#
#=======================================
BSNT_02699___ 1 ATGAGCAGTGAATTATTAGATGCTCTCACGATTCTTGAAAAAGAAAAAGG 50
|||||.|||||.||.||||||||.||.||..||||||||||||||||.||
BL01227___nus 1 ATGAGTAGTGAGTTGTTAGATGCCCTGACTGTTCTTGAAAAAGAAAAGGG 50
BSNT_02699___ 51 CATCAGTAAAGAAATTATCATCGAAGCAATCGAAGCTGCGTTAATTTCTG 100
.||||||||.||.|||||.||.||||||||.|||||||||.|.|||||.|
BL01227___nus 51 AATCAGTAAGGACATTATTATTGAAGCAATTGAAGCTGCGCTCATTTCCG 100
BSNT_02699___ 101 CTTATAAGCGGAATTTTAATCAAGCGCAAAATGTACGGGTGGATCTAAAC 150
|||||||||||||.||.||.||.|||||.||.||..||||.|||.|||||
BL01227___nus 101 CTTATAAGCGGAACTTCAACCAGGCGCAGAACGTCAGGGTAGATTTAAAC 150
BSNT_02699___ 151 CGTGAAACTGGCTCCATCCGTGTATTTGCAAGAAAAGATGTCGTTGACGA 200
||.||.||.||.||.|||||.||.||.||..|.|||||||||||.||.||
BL01227___nus 151 CGCGACACCGGTTCAATCCGCGTTTTCGCCCGCAAAGATGTCGTGGATGA 200
BSNT_02699___ 201 AGTATACGACCAGAGATTAGAGATCTCAATTGAAGA-GGCGCAGGGCATC 249
|||.||.||.|.|.|..|.||.|||||.|||||||| |.||.| ..||||
BL01227___nus 201 AGTGTATGATCCGCGCCTTGAAATCTCGATTGAAGATGCCGTA-AACATC 249
BSNT_02699___ 250 CATCCGGAATATATGGTCGGCGATGTCGTCGAAATCGAAGTTACACCTAA 299
.|||||.|.||.||.|||||.||||||||.|||||||||||.||.||.||
BL01227___nus 250 AATCCGAACTACATTGTCGGAGATGTCGTGGAAATCGAAGTGACGCCGAA 299
BSNT_02699___ 300 GGATTTCGGGCGCATAGCTGCTCAAACAGCGAAGCAGGTCGTTACACAGC 349
.||||||||.|||||.|||||.||.||.||.|||||||||||.||.||||
BL01227___nus 300 AGATTTCGGCCGCATCGCTGCCCAGACGGCAAAGCAGGTCGTGACCCAGC 349
BSNT_02699___ 350 GTGTGCGCGAAGCTGAGCGCGGTGTGATTTATTCTGAATTTATCGACCGT 399
|.||.||||||||.||||||||.||.||.|||||||||||.||||||||.
BL01227___nus 350 GCGTCCGCGAAGCGGAGCGCGGCGTCATCTATTCTGAATTCATCGACCGC 399
BSNT_02699___ 400 GAAGAAGACATCATGACAGGGATCGTCCAGCGTCTGGACAATAAATTTAT 449
||.|||||.|||||||||||.|||||||||||..|.||||||||.||.||
BL01227___nus 400 GAGGAAGATATCATGACAGGCATCGTCCAGCGGATCGACAATAAGTTCAT 449
BSNT_02699___ 450 CTACGTGTCTTTAGGCAAAATCGAAGC-CTTGCTGCCGGTTAATGAGCAA 498
|||.||.||||||||.||||||||.|| ||| ||.||||||...||.||.
BL01227___nus 450 CTATGTCTCTTTAGGAAAAATCGAGGCGCTT-CTCCCGGTTGCAGAACAG 498
BSNT_02699___ 499 ATGCCGAATGAAAGCTACAAACCTCATGACCGCATTAAGGTATATATCAC 548
||||||||||||..||||||.|||||||||||.||.|||||.|..||.||
BL01227___nus 499 ATGCCGAATGAAGTCTACAAGCCTCATGACCGGATCAAGGTGTTCATTAC 548
BSNT_02699___ 549 AAAAGTAGAAAAAACAACGAAGGGCCCGCAGATTTATGTGTCAAGAACAC 598
||||||.||||||||.||||||||.|||||||||||.||.||||||||.|
BL01227___nus 549 AAAAGTCGAAAAAACGACGAAGGGTCCGCAGATTTACGTTTCAAGAACTC 598
BSNT_02699___ 599 ATCCAGGCCTGTTAAAGCGTTTGTTTGAAATTGAAGTGCCTGAAATTTAT 648
|||||||..|.|||||||||.|.||||||||.||||||||.||||||||.
BL01227___nus 599 ATCCAGGTTTATTAAAGCGTCTCTTTGAAATCGAAGTGCCGGAAATTTAC 648
BSNT_02699___ 649 GATGGAACTGTCGAGCTAAAATCTGTTGCCAGAGAAGCCGGCGACCGTTC 698
||||||||.||||||||.|||||.||.||.||||||||.||.|||||.||
BL01227___nus 649 GATGGAACGGTCGAGCTCAAATCCGTGGCGAGAGAAGCGGGAGACCGCTC 698
BSNT_02699___ 699 AAAAATTTCTGTTCGCACAGATGATCCTGACGTGGATCCTGTCGGTTCAT 748
.||.|||||.||.|||||.|||.||||.|||.|.|||||.|||||..|.|
BL01227___nus 699 GAAGATTTCCGTCCGCACGGATAATCCCGACATCGATCCCGTCGGCGCCT 748
BSNT_02699___ 749 GCGTAGGGCCTAAAGGCCAGCGTGTGCAAGCAATCGTCAATGAATTAAAA 798
||||.||.||.||.||.|||||.||.||.||.||||||||||||||.|||
BL01227___nus 749 GCGTCGGACCGAAGGGTCAGCGCGTTCAGGCGATCGTCAATGAATTGAAA 798
BSNT_02699___ 799 GGTGAAAAAATTGACATTGTCAACTGGTCCAGTGATCCTGTAGAATTTGT 848
||.||.||||||||.|||||..|||||||.|..||.||.||.||||||||
BL01227___nus 799 GGCGAGAAAATTGATATTGTTCACTGGTCAAACGACCCGGTTGAATTTGT 848
BSNT_02699___ 849 CGCGAATGCGCTCAGCCCTTCCAAAGTGCTTGATGTCATTGTTAATGAAG 898
|||.||||||||.||||||||.||||||||.||.|||||.||.|||||||
BL01227___nus 849 CGCCAATGCGCTGAGCCCTTCAAAAGTGCTCGACGTCATCGTCAATGAAG 898
BSNT_02699___ 899 AAGAAAAAGCGACAACTGTTATTGTTCCTGATTACCAGCTGTCTCTGGCA 948
|.||.|||||||||||.|||.|.||||||||.||.||||||||.||.||.
BL01227___nus 899 AGGATAAAGCGACAACGGTTGTCGTTCCTGACTATCAGCTGTCGCTCGCC 948
BSNT_02699___ 949 ATTGGCAAAAGAGGACAAAACGCACGCTTAGCTGCTAAACTGACAGGCTG 998
||.||.||||||||.||||||||.|||.|.||.||.||.||||||.||||
BL01227___nus 949 ATCGGAAAAAGAGGTCAAAACGCCCGCCTGGCAGCCAAGCTGACAAGCTG 998
BSNT_02699___ 999 GAAGATTGATATTAAGAGCGAAACGGACGCAAGAGAACTTGGAATCTATC 1048
||||||.||||||||.||||||||.||.||||||||.||||||||.||||
BL01227___nus 999 GAAGATCGATATTAAAAGCGAAACAGATGCAAGAGAGCTTGGAATTTATC 1048
BSNT_02699___ 1049 CGAGAGAACTTGAAGAAGATGATGAGCC------GCTCTTTACGG--AGC 1090
|.||.||.||||||||| ||.||||| |||.||...|| |||
BL01227___nus 1049 CAAGGGAGCTTGAAGAA---GAGGAGCCGGAAGAGCTTTTCTTGGAAAGC 1095
BSNT_02699___ 1091 CTGAAACTGCTGAATCGGATGAATAA 1116
||||||.|.|||||||||||||||
BL01227___nus 1096 --GAAACTCCAGAATCGGATGAATAA 1119
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