Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02701 and BL01226

See Amino acid alignment / Visit BSNT_02701 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:26
# Commandline: needle
#    -asequence dna-align/BSNT_02701___ylxR.1.5803.seq
#    -bsequence dna-align/BL01226___ylxR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02701___ylxR-BL01226___ylxR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02701___ylxR-BL01226___ylxR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02701___ylxR
# 2: BL01226___ylxR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     223/280 (79.6%)
# Similarity:   223/280 (79.6%)
# Gaps:           8/280 ( 2.9%)
# Score: 839.0
# 
#
#=======================================

BSNT_02701___      1 GTGAATAAACACAAA-AAGATCCC-ATTACGCAAATGTGTAGTGACTGGT     48
                     ||||| ||.|..||| |||||||| .||| |.|||||.||.||.||.||.
BL01226___ylx      1 GTGAA-AAGCCGAAAGAAGATCCCGCTTA-GAAAATGCGTCGTAACAGGG     48

BSNT_02701___     49 GAAATGAAGCCTAAAAAGGAACTGATCCGAGTTGTACGGTCGAAAGAAGG     98
                     |||||||||||||||||.||.||.|||||.||.||.||.|||||.|||||
BL01226___ylx     49 GAAATGAAGCCTAAAAAAGAGCTCATCCGCGTCGTCCGTTCGAAGGAAGG     98

BSNT_02701___     99 CGAAATCTCAGTAGACCCGACCGGAAAAAAGAATGGGCGGGGTGCTTATT    148
                     ||||.|.||.||.|||||||||||.||.|||||.||.|||||.||.||..
BL01226___ylx     99 CGAAGTTTCCGTTGACCCGACCGGCAAGAAGAACGGCCGGGGAGCCTACC    148

BSNT_02701___    149 TAACGCTGGATAAAGA-GTGCATCTTAGCAGCAAAAAAGAAAAACA-CTT    196
                     |.||.||.|||||||| || |||.|||.|.||||||||||.||||| |||
BL01226___ylx    149 TTACACTTGATAAAGACGT-CATTTTAACTGCAAAAAAGAGAAACAGCTT    197

BSNT_02701___    197 TGCAAAATCAATTTCAATCACAAATCGATGACCAGATTTTCGATGAATTG    246
                     .|| ||||||..|||||.||||.||.|||||.||||||||.||||||.||
BL01226___ylx    198 AGC-AAATCAGCTTCAAGCACAGATTGATGATCAGATTTTTGATGAACTG    246

BSNT_02701___    247 CTGGAACTGGCGGAAAAGGTGAAAAAATAA    276
                     |||||||||||||||||||.|||.|.||||
BL01226___ylx    247 CTGGAACTGGCGGAAAAGGAGAATAGATAA    276


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