Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02702 and BL01225

See Amino acid alignment / Visit BSNT_02702 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:26
# Commandline: needle
#    -asequence dna-align/BSNT_02702.1.5803.seq
#    -bsequence dna-align/BL01225___ylxQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02702-BL01225___ylxQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02702-BL01225___ylxQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02702
# 2: BL01225___ylxQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     178/304 (58.6%)
# Similarity:   178/304 (58.6%)
# Gaps:          74/304 (24.3%)
# Score: 662.0
# 
#
#=======================================

BSNT_02702         0 --------------------------------------------------      0
                                                                       
BL01225___ylx      1 ATGTCGGAATCAGAATGGTTTTCCTTGCTGGGTCTGGCGAATCGAGCTCG     50

BSNT_02702         1 ----------------------TTGGTAATAAAAGAAATCAGGAATGCGC     28
                                           .||||..|.||||||||||||.||.|||
BL01225___ylx     51 AAAGGTCGTGTCCGGAGAAGACCTGGTTGTGAAAGAAATCAGGCATTCGC    100

BSNT_02702        29 GTGCAAAGCTTGTCCTGCTTACAGAGGATGCATCATCTAACACAGCAAAA     78
                     |.|||||||||||..|||||.||||.||.|||||..|||||||.|..|||
BL01225___ylx    101 GCGCAAAGCTTGTTTTGCTTGCAGACGACGCATCGGCTAACACGGAGAAA    150

BSNT_02702        79 AAAGTAACTGACAAGTGCAATTATTATAAAGTCCCTTATAAAAAAGTCGA    128
                     ||||||||.|||||.||||...|.||..|.||.||....|||||||||| 
BL01225___ylx    151 AAAGTAACCGACAAATGCAGGCACTACGATGTACCGGTGAAAAAAGTCG-    199

BSNT_02702       129 GAG-TCGCGCGGTTCTTGGACGCTCTATCGGTAAAGAAGCCCGTGTCGTT    177
                     |.| |||.|.|.||||.||.||.||.|||||.||||||.|||||||.|||
BL01225___ylx    200 GTGATCGTGTGCTTCTGGGCCGTTCAATCGGCAAAGAATCCCGTGTGGTT    249

BSNT_02702       178 GTCGCCGTCACTGACCAAGGTTTTGCGAATAAGCTGATCAGCTTGCTCGA    227
                     ||.||.||||||||.||||||||||||||||.|.||.||.|...||||||
BL01225___ylx    250 GTTGCTGTCACTGATCAAGGTTTTGCGAATACGTTGCTCCGAAAGCTCGA    299

BSNT_02702       228 TTAA    231
                     ||||
BL01225___ylx    300 TTAA    303


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