Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02704 and BL01224
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence dna-align/BSNT_02704___infB.1.5803.seq
# -bsequence dna-align/BL01224___infB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02704___infB-BL01224___infB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02704___infB-BL01224___infB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02704___infB
# 2: BL01224___infB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2189
# Identity: 1745/2189 (79.7%)
# Similarity: 1745/2189 (79.7%)
# Gaps: 76/2189 ( 3.5%)
# Score: 6968.0
#
#
#=======================================
BSNT_02704___ 1 ATGGCTAAAATGAGAGTATACGAATATGCAAAAGCGTTAAATGTTTCAAG 50
|||||||||||||||||.||.||||||||||||||..|||||||||||||
BL01224___inf 1 ATGGCTAAAATGAGAGTTTATGAATATGCAAAAGCCATAAATGTTTCAAG 50
BSNT_02704___ 51 TAAGGAAATTTTGACCGCACTGAAGAACATGGATTTAGAAGTGAATAATC 100
||||||.|||.|..|.|||.||||..|.|||.||.|.|||||.|||||.|
BL01224___inf 51 TAAGGATATTATCGCGGCATTGAAAGATATGAATATCGAAGTCAATAACC 100
BSNT_02704___ 101 ACATGGCCATGCTTGAAGAAAAGGCCATTAAAAAGCTAGATGCCAAATA- 149
|.|||||.|||.|.||||||||.||.||.|||.||||.||| ||||.|
BL01224___inf 101 ATATGGCGATGATCGAAGAAAATGCGATCAAACAGCTCGAT--CAAAAAT 148
BSNT_02704___ 150 TAAAAAAGGCGGCGCAGCTGCTAAATC---------TCAAAA----GCCA 186
|.||.||| ||| ||||||.| |.|||| |||.
BL01224___inf 149 TCAAGAAG-------AGC-GCTAAACCTGCGGGAAATAAAAAGGATGCCG 190
BSNT_02704___ 187 GCAGAAACGAACAAAAACAAACAGCCACAAGGGGTTAATCAGCAATCAGC 236
|.|.|..||.||||||.| ..||||.|.|||..|..||.|.| ||| ||
BL01224___inf 191 GTACAGGCGGACAAAAGC-CGCAGCAAGAAGCCGCAAAACTG-AAT--GC 236
BSNT_02704___ 237 TGGAAATCAACCAAATAAAATTCGAGACGGAAAGAAGAATGACGTGCAGA 286
.||||.|.|.|||||.||||.|||||||||||||||||||.|||||||||
BL01224___inf 237 CGGAAGTAAGCCAAACAAAAATCGAGACGGAAAGAAGAATAACGTGCAGA 286
BSNT_02704___ 287 ATAATCAATTTAAC---AAAAACAAGAAG---AATAACAACAACAAAAAA 330
|||.|||||||||| |||||||||||| ||.||||||||||||||.
BL01224___inf 287 ATACTCAATTTAACAATAAAAACAAGAAGAAAAACAACAACAACAAAAAG 336
BSNT_02704___ 331 AATAAACGCAACAACAACAATAATAAAAACCAACA------TCAGCAAAA 374
||.|||||| ..||||||.||.|| ||||.|.||
BL01224___inf 337 AACAAACGC------------GGTAAAAATCATCAATCTCCTCAGGAGAA 374
BSNT_02704___ 375 GCCTGTAAAGCCGAAAAAAGAGCTTCCTGAGAAAATTACATTCTCTGGCA 424
||...|.||||||||||||||.||.|||||.|||||...||| |..||
BL01224___inf 375 GCAGTTCAAGCCGAAAAAAGAACTGCCTGAAAAAATCGAATT---TACCA 421
BSNT_02704___ 425 CTTTAA---CAGTTGGCGCACTTGCTGAAGAGCTTGGCAAAGAGCCTTCA 471
..|.|| |.||.|||||.|||||.||||||||.||.|||||.||.|||
BL01224___inf 422 ACTCAATGTCGGTCGGCGCGCTTGCCGAAGAGCTCGGAAAAGAACCGTCA 471
BSNT_02704___ 472 GAAATCATTAAAAAGCTGATGCTTCTTGGCGTAATGGCAACTATTAACCA 521
||||||||||||||..|.||||||||.|||.|.|||||.||.||.|||||
BL01224___inf 472 GAAATCATTAAAAAATTAATGCTTCTCGGCATCATGGCGACGATCAACCA 521
BSNT_02704___ 522 AGAGCTTGATAAAGACACAATCGAACTCATTGCATCAGAATATGGTGTTG 571
|||.|||||.|||||.||..|.||.||.||.||.||||||||.||.||.|
BL01224___inf 522 AGATCTTGACAAAGATACCGTTGAGCTGATCGCTTCAGAATACGGCGTCG 571
BSNT_02704___ 572 AAACAGAAGAGGTCATTGTGCTTGAAGAAACAGAGCTGGAAAAATACGAA 621
||...|||||.||.||.||.|.|||||||||.||..|.||||||||||||
BL01224___inf 572 AAGTCGAAGAAGTGATCGTCCATGAAGAAACCGAATTCGAAAAATACGAA 621
BSNT_02704___ 622 GAGCCTGATAATGAAGAGGATCTTGAAATTCGTCCTCCTGTCGTGACAAT 671
|||||.|||||.|||||.||.||.|||||.||||||||||||||.||.||
BL01224___inf 622 GAGCCGGATAACGAAGAAGACCTCGAAATCCGTCCTCCTGTCGTAACGAT 671
BSNT_02704___ 672 CATGGGCCACGTTGACCATGGGAAAACAACGCTTCTTGACAGCATCCGTA 721
||||||.|||||.|||||.||.||||||||||||||.|||||||||.|.|
BL01224___inf 672 CATGGGTCACGTCGACCACGGAAAAACAACGCTTCTCGACAGCATCAGAA 721
BSNT_02704___ 722 AAACAAAGGTTGTTGAAGGAGAAGCAGGCGGAATCACTCAGCATATCGGC 771
||||.|||||.||||||||.|||||.||.||.||||||||||||||||||
BL01224___inf 722 AAACGAAGGTCGTTGAAGGCGAAGCCGGAGGCATCACTCAGCATATCGGC 771
BSNT_02704___ 772 GCTTATCAAATTGAAGAGAACGGCAAGAAAATCACGTTTTTGGATACACC 821
||||||||.||.||.||.|||||||||||.||.||.||..|.||.||.||
BL01224___inf 772 GCTTATCAGATCGAGGAAAACGGCAAGAAGATTACCTTCCTCGACACTCC 821
BSNT_02704___ 822 GGGCCACGCCGCATTTACAACAATGCGTGCACGCGGTGCAGAAGTAACTG 871
||||||||||||.||||||||.|||||.|||||||||||.|||||.||.|
BL01224___inf 822 GGGCCACGCCGCGTTTACAACGATGCGCGCACGCGGTGCGGAAGTTACGG 871
BSNT_02704___ 872 ATATTACGATTCTTGTCGTAGCTGCCGATGACGGTGTCATGCCGCAAACA 921
|.|||||||||||.|||||||||||.||||||||.|||||||||||.||.
BL01224___inf 872 ACATTACGATTCTCGTCGTAGCTGCAGATGACGGGGTCATGCCGCAGACG 921
BSNT_02704___ 922 GTTGAAGCGATTAACCATGCAAAAGCAGCAGAGGTTCCAATCATCGTTGC 971
|||||||||||.||||||||.|||||.||.||.||.||.||||||||.||
BL01224___inf 922 GTTGAAGCGATCAACCATGCGAAAGCGGCTGAAGTGCCGATCATCGTCGC 971
BSNT_02704___ 972 TGTGAATAAAATAGATAAA--GAATCCGCAAACCCTGACCGTGTGATGCA 1019
|||.||.|||||.||.||| || |.||||||||||||||.||||||||
BL01224___inf 972 TGTCAACAAAATCGACAAACCGA--CGGCAAACCCTGACCGCGTGATGCA 1019
BSNT_02704___ 1020 AGAACTGACGGAATACGGACTTGTCCCTGAAGCTTGGGGCGGAGAAACCA 1069
.||.|||||.|||.||||.|||||.||||||||.|||||.||.||.||.|
BL01224___inf 1020 GGAGCTGACTGAACACGGTCTTGTTCCTGAAGCATGGGGAGGCGAGACGA 1069
BSNT_02704___ 1070 TTTTTGTGCCGCTTTCCG--CTTTAACTGGAAAAGGCATTGATGAGCTCG 1117
|||||||.||.||||||| |||| |.|||.|.||.||.||||||||..
BL01224___inf 1070 TTTTTGTTCCTCTTTCCGCACTTT--CAGGAGAGGGAATCGATGAGCTGA 1117
BSNT_02704___ 1118 TTGAAATGATTTTGCTTGTCAGTGAGGTAGAGGAACTGAAAGCGAATCCG 1167
|.||||||||..||||.|||||.||.||.|||||.||.|||||.||||||
BL01224___inf 1118 TCGAAATGATCCTGCTCGTCAGCGAAGTCGAGGAGCTCAAAGCAAATCCG 1167
BSNT_02704___ 1168 AACCGTCA-GGCAAAAGGAACGGTTATTGAAGCTGAACTCGATAAAGGCA 1216
||||| || |||||||||||||||.||.|||||.||.||.||||||||.|
BL01224___inf 1168 AACCG-CAGGGCAAAAGGAACGGTCATCGAAGCCGAGCTTGATAAAGGTA 1216
BSNT_02704___ 1217 GAGGGTCAGTCGCGACATTGCTCGTACAGACTGGAACACTGCATGTCGGT 1266
.|||.||.|||||.||.||||||||.||.|..|||||.||.||.|||||.
BL01224___inf 1217 AAGGTTCTGTCGCAACGTTGCTCGTTCAAAACGGAACGCTTCACGTCGGA 1266
BSNT_02704___ 1267 GATCCGATCGTAGTCGGCAATACATTTGGCCGTGTCCGTGCAATGGTTAA 1316
|||||||||||.|||||.||.||.||.||.||.||.|||||.|||||.||
BL01224___inf 1267 GATCCGATCGTCGTCGGGAACACTTTCGGACGCGTTCGTGCGATGGTCAA 1316
BSNT_02704___ 1317 CGACATTGGCCGCCGTGTGAAAACTGCCGGCCCGTCAACTCCGGTTGAAA 1366
.||..|.|||.|.||.||||||.|.||.||.|||||||||||.|||||.|
BL01224___inf 1317 TGATGTCGGCAGACGCGTGAAATCGGCGGGACCGTCAACTCCTGTTGAGA 1366
BSNT_02704___ 1367 TTACCGGTTTGAATGATGTCCCTCAAGCGGGAGACCAATTCCTTGTCTTT 1416
|.|||||.|||||.||.||.||..|.||.||.||.||.||||||||.||.
BL01224___inf 1367 TCACCGGGTTGAACGAAGTTCCGAACGCAGGGGATCAGTTCCTTGTGTTC 1416
BSNT_02704___ 1417 AAGGATGAAAAAACAGCTCGTTCTGTCGGTGAAGCCCGTGCTTCGAAACA 1466
||.||.|||||||||||.|||||.|||||.|||||.||.|||.|.|||||
BL01224___inf 1417 AAAGACGAAAAAACAGCCCGTTCCGTCGGCGAAGCGCGCGCTACCAAACA 1466
BSNT_02704___ 1467 GCTTGAAGAGCAGCGCAGCGATAAAGCGAAGCTCAGTCTTGATGATTTAT 1516
|||||||||.||||||||||||||||||||||||||.||||||||.||.|
BL01224___inf 1467 GCTTGAAGAACAGCGCAGCGATAAAGCGAAGCTCAGCCTTGATGACTTGT 1516
BSNT_02704___ 1517 TCGAGCAAATTAAGCAAGGTGATGTAAAAGACATCAACCTCATCGTAAAA 1566
|.||.||.|||||.|||||.|||||.|||||.||.||||||.||||||||
BL01224___inf 1517 TTGAACAGATTAAACAAGGCGATGTCAAAGAAATTAACCTCGTCGTAAAA 1566
BSNT_02704___ 1567 GCTGACGTTCAAGGATCTGCTGAAGCTTTAACGGCTGCA-CTT--CAAAA 1613
||.||.||||||||.||||.||||||..| |||.||| ||| |||||
BL01224___inf 1567 GCCGATGTTCAAGGCTCTGTTGAAGCGCT---GGCCGCAGCTTTGCAAAA 1613
BSNT_02704___ 1614 AATTGAAGTAGAAGGCGTTAAAGTGAAAATCATCCATACAGGCGTTGGTG 1663
||||||.||.||||||||.|.|||.|||||||||||.||||||||.||||
BL01224___inf 1614 AATTGAGGTCGAAGGCGTCAGAGTCAAAATCATCCACACAGGCGTAGGTG 1663
BSNT_02704___ 1664 CGATTACTGAATCAGACATTATCTTGGCATCTGCTTCCAATGCAATTGTT 1713
|||||||.||||||||||||||.||.||.|||||.||.||||||||.||.
BL01224___inf 1664 CGATTACCGAATCAGACATTATTTTAGCTTCTGCATCAAATGCAATCGTG 1713
BSNT_02704___ 1714 ATCGGGTTTAATGTGAGACCGGACGGAAATGCTAAGAGTACGGCTGAAGC 1763
||||||||||||||.|||||.||||||||||||||||||||.||.|||||
BL01224___inf 1714 ATCGGGTTTAATGTCAGACCTGACGGAAATGCTAAGAGTACCGCCGAAGC 1763
BSNT_02704___ 1764 TGAAAATGTAGATATTCGACTTCACCGTATCATTTACAAAGTAATCGACG 1813
.||||||||.|||||.||.||.|||||.||||||||.|||||.|||||.|
BL01224___inf 1764 CGAAAATGTGGATATCCGCCTCCACCGCATCATTTATAAAGTCATCGATG 1813
BSNT_02704___ 1814 AGATTGAAGCTGCCATGAAAGGTATGCTTGATCCTGAATATGAAGAAAAA 1863
||||.|||||.|||||||||||.||||||||||||||.||||||||||||
BL01224___inf 1814 AGATCGAAGCAGCCATGAAAGGCATGCTTGATCCTGAGTATGAAGAAAAA 1863
BSNT_02704___ 1864 GTAATTGGTCA-AGTAGAAGTACGCCAAACATTCAAAGTATCTAAAATCG 1912
||.||.|| || .||.|||||.||.||||||||||||||.||||||||||
BL01224___inf 1864 GTGATCGG-CATGGTTGAAGTCCGTCAAACATTCAAAGTCTCTAAAATCG 1912
BSNT_02704___ 1913 GTACAATTGCCGGCGGATATGTTACTGAAGGAACCATTACGCGCGACAGC 1962
|.||.||||||||.||.|||||.||.|||||.||.||.||||||||||||
BL01224___inf 1913 GAACGATTGCCGGAGGCTATGTAACGGAAGGTACGATCACGCGCGACAGC 1962
BSNT_02704___ 1963 GGCCTCCGTTTAATTCGTGACGGCGTCGTCATCTTTGAAGGCGAAGTAGA 2012
||..||||.||.||.||.|||||||||||||||||||||||.|||||.||
BL01224___inf 1963 GGAATCCGCTTGATCCGCGACGGCGTCGTCATCTTTGAAGGGGAAGTCGA 2012
BSNT_02704___ 2013 TGTTCTGAAACGCTTTAAAGACGATGTGAAAGAAGTTTCACAAGGCTATG 2062
|||.|||||||||||||||||.|||||.||||||||||||||||||||||
BL01224___inf 2013 TGTGCTGAAACGCTTTAAAGATGATGTCAAAGAAGTTTCACAAGGCTATG 2062
BSNT_02704___ 2063 AATGTGGTATTACAATTAAGAAATACAATGACATTCGTGAAGGTGACATC 2112
||||||||||.||.||||||||||||||.|||||.||.|||||.||.||.
BL01224___inf 2063 AATGTGGTATCACCATTAAGAAATACAACGACATACGCGAAGGCGATATG 2112
BSNT_02704___ 2113 CTTGAAGCGTTTGTCATGCAAGAAATTGAAAGAACGTGA 2151
.|.|||||||.|||||||||||||||||||||||.||||
BL01224___inf 2113 ATCGAAGCGTATGTCATGCAAGAAATTGAAAGAAAGTGA 2151
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