Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02707 and BL01222
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence dna-align/BSNT_02707___truB.1.5803.seq
# -bsequence dna-align/BL01222___truB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02707___truB-BL01222___truB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02707___truB-BL01222___truB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02707___truB
# 2: BL01222___truB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 975
# Identity: 688/975 (70.6%)
# Similarity: 688/975 (70.6%)
# Gaps: 90/975 ( 9.2%)
# Score: 2417.0
#
#
#=======================================
BSNT_02707___ 1 ATGGTTAACGGAGTTCTCCTTTTACATAAACCTGTTGGCATGACATCGCA 50
|||..|||||||||.||.||.|||||||||||.||.||||||||.|||||
BL01222___tru 1 ATGTATAACGGAGTCCTTCTATTACATAAACCGGTCGGCATGACCTCGCA 50
BSNT_02707___ 51 CGACTGTGTCATGAAGATCCGAAAGCTGTTAAAAACAAAAAAAGTAGGAC 100
||||||.||||||||||||||.||.|||.|.|||||||||||.||.||.|
BL01222___tru 51 CGACTGCGTCATGAAGATCCGCAAACTGCTGAAAACAAAAAAGGTCGGCC 100
BSNT_02707___ 101 ATACAGGAACGCTCGATCCGGAAGTGTCAGGCGTGCTTCCGATTTGTGTA 150
||||.||.||.||.|||||.||.|||||.|||||.||.|||||.||.||.
BL01222___tru 101 ATACCGGTACACTGGATCCCGAGGTGTCGGGCGTTCTCCCGATCTGCGTC 150
BSNT_02707___ 151 GGAAGAGCGACAAAAATAGTCGAATACTTAACTGAAAAATCTAAAACGTA 200
||.||.||.||.|||||.|||||.||.||.||.|||||.||.|||||.||
BL01222___tru 151 GGGAGGGCAACCAAAATCGTCGAGTATTTGACCGAAAAGTCCAAAACATA 200
BSNT_02707___ 201 TGATGCAGAAATAACGCTTGGCTTTTCAACCACTACAGAGGATCAAACCG 250
|||||||||..|.||||||||||.|||.||....|||||||||||.||.|
BL01222___tru 201 TGATGCAGAGGTCACGCTTGGCTGTTCCACGGAGACAGAGGATCAGACGG 250
BSNT_02707___ 251 GAGAAACGGT----GGAAATAAAGCCTGTCAATCACGACATTGATAAAGC 296
|.||| || |.|||.||| ||.||| || |||
BL01222___tru 251 GGGAA---GTCACAGAAAAGAAA-CCCGTC----------TT-----AGC 281
BSNT_02707___ 297 G------GATGTAGAAAAGGTTTTAAACAGT------------------- 321
| ||| |||.|| ||.||
BL01222___tru 282 GCCGCCTGAT---GAACAG-------ACCGTGCAGAGCGTCCTGAGATCT 321
BSNT_02707___ 322 -TTAAAGGGGAAACAA--GAACAAATTCCGCCCATGTATTCCGCTGTAAA 368
||.|||| |||.| ||.||..|||||||.||||||||.|||||.||
BL01222___tru 322 CTTGAAGG---AACGATTGAGCAGGTTCCGCCGATGTATTCAGCTGTCAA 368
BSNT_02707___ 369 AGTAAACGGCAAAAAATTATACGAATACGCAAGAGCAGGGATTGAAGTAG 418
.|||..|||||||||..|.||.||||||||..|.||.||.||.||.||.|
BL01222___tru 369 GGTAGGCGGCAAAAAGCTGTATGAATACGCGCGGGCTGGAATCGAGGTTG 418
BSNT_02707___ 419 AACGTCCGAAACGTATGATAACCATTGAAGACATTGCCCTGACGACAGAG 468
||||.|||||.||.|..||.|||||..|..|.||.|..|||||..|.|||
BL01222___tru 419 AACGGCCGAAGCGGACCATCACCATCCATCATATCGAACTGACATCCGAG 468
BSNT_02707___ 469 ATTAAACATCATGGAGAAACCGCAAGCTTCCGGTTTACAGTGACTTGCTC 518
||....|||.|.||.||.|..||..|||||||||||...|||||.||.||
BL01222___tru 469 ATCCGCCATGAGGGGGATAAAGCCCGCTTCCGGTTTGTTGTGACATGTTC 518
BSNT_02707___ 519 CAAAGGGACCTATGTAAGGACGCTGGCGGTCATGATCGGAGAAAAGCTCG 568
.|||||.||.|||||.|||||..|||||||.|..|||||.||.|||||||
BL01222___tru 519 AAAAGGCACATATGTCAGGACCTTGGCGGTAACCATCGGGGAGAAGCTCG 568
BSNT_02707___ 569 GATATCCGGCTCATATGTCTCATTTAATCCGTACGGCATCCGGAGATTTT 618
|||||||.||.||||||||..||.|..||.|.||.||.||.||...|||.
BL01222___tru 569 GATATCCCGCGCATATGTCCAATCTGGTCAGGACCGCGTCAGGCCCTTTC 618
BSNT_02707___ 619 TCTCTCGACGAATGCTTTACTTTTGATGAGCTCGAAGCACAGGCCCAATC 668
.|.||.|||||||||||.||.|||||.||..|||| ||||...|||
BL01222___tru 619 ACCCTTGACGAATGCTTGACCTTTGAAGACGTCGA-----AGGCTTGATC 663
BSNT_02707___ 669 -----CGGAACCGTG---GAAGAGCATACAGTTCCTATTGAACGTGCGCT 710
||||||..|| |||.||| ..||.||.||.|||||||||||
BL01222___tru 664 GCTGACGGAACATTGTCTGAAAAGC---TCGTCCCCATCGAACGTGCGCT 710
BSNT_02707___ 711 CAATCATTTGCCGAAATGGATCATAAGTGATACATTAGCTAAGAAAGTAG 760
..|||||||||||||||||||.||.|||||||||||||||||||||||.|
BL01222___tru 711 TGATCATTTGCCGAAATGGATAATTAGTGATACATTAGCTAAGAAAGTGG 760
BSNT_02707___ 761 AAAATGGGGCTTTGCTTGAGACGCCCGAGCAG-TTTTCTGAAATGACAAG 809
|||||||.||..|||||||.||||||| |||| ||||||.|..||||.||
BL01222___tru 761 AAAATGGAGCGGTGCTTGAAACGCCCG-GCAGCTTTTCTCATTTGACGAG 809
BSNT_02707___ 810 TGAAGACCGTATCGCCGTCTTTACTGAATCTGGAACCTGTTTG----GCG 855
.||||||||.||.||.||||||||.|||.|.|| ||.| || ||.
BL01222___tru 810 CGAAGACCGCATTGCGGTCTTTACGGAAGCAGG--CCGG--TGCACAGCC 855
BSNT_02707___ 856 ATCTATTTCCCTCATCCTGCAAAAAAAGGGCTGTTAAAGCCGGCAAAAGT 905
.||||||..||.|||||..|.||||..||..||||.||||||||||||||
BL01222___tru 856 GTCTATTATCCGCATCCGACCAAAACCGGTTTGTTGAAGCCGGCAAAAGT 905
BSNT_02707___ 906 ATTGATGCAAAAAAGCGAACAATAG 930
|.|..||||||||||||||||||||
BL01222___tru 906 ACTCGTGCAAAAAAGCGAACAATAG 930
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