Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02709 and BL01217

See Amino acid alignment / Visit BSNT_02709 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence dna-align/BSNT_02709___pnpA.1.5803.seq
#    -bsequence dna-align/BL01217___pnpA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02709___pnpA-BL01217___pnpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02709___pnpA-BL01217___pnpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02709___pnpA
# 2: BL01217___pnpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2128
# Identity:    1735/2128 (81.5%)
# Similarity:  1735/2128 (81.5%)
# Gaps:          20/2128 ( 0.9%)
# Score: 7078.0
# 
#
#=======================================

BSNT_02709___      1 ATGGGACAAGAAAAACATGTCTTTACCATAGATTGGGCCGGAAGAACGCT     50
                     |||||||||||.||||||||||||.||||||||||||||||..|.|.|||
BL01217___pnp      1 ATGGGACAAGAGAAACATGTCTTTTCCATAGATTGGGCCGGCCGCAAGCT     50

BSNT_02709___     51 TACTGTTGAAACCGGCCAGCTTGCCAAACAGGCAAATGGTGCTGTGATGA    100
                     .||.||.|||||||||||||||||.|||||.|||||.||.|||||.|||.
BL01217___pnp     51 CACAGTAGAAACCGGCCAGCTTGCAAAACAAGCAAACGGAGCTGTCATGG    100

BSNT_02709___    101 TCCGCTACGGTGATACAGCAGTACTTAGTACAGCAACCGCTTCAAAAGAA    150
                     |.||.||.||.||.||.|||||.||.||.||.|||||.||||||||||||
BL01217___pnp    101 TGCGTTATGGAGACACTGCAGTGCTCAGCACCGCAACGGCTTCAAAAGAA    150

BSNT_02709___    151 CCT-AAACCGCTTGATTTCTTCCCTCTTACTGTAAACTATGAAGAAAGAT    199
                     ||| |||||| |.||.||.|||||..|.||.|||||.||.|||||||||.
BL01217___pnp    151 CCTAAAACCG-TAGACTTTTTCCCGTTAACCGTAAATTACGAAGAAAGAC    199

BSNT_02709___    200 TATATGCGGTAGGGAAAATTCCGGGCGGATTTATTAAAAGAGAAGGACGT    249
                     |.||.||.||.||.||.|||||||||||.||||||||||||||.|||.|.
BL01217___pnp    200 TTTACGCCGTCGGAAAGATTCCGGGCGGGTTTATTAAAAGAGAGGGAAGA    249

BSNT_02709___    250 CCAAGTGAAAAAGCGGTTCTTGCCAGCCGTTTAATTGACCGTCCGATCCG    299
                     ||.||.|||||||||.||||.||||||||.|||||.|||.|.||||||||
BL01217___pnp    250 CCGAGCGAAAAAGCGATTCTCGCCAGCCGGTTAATCGACAGGCCGATCCG    299

BSNT_02709___    300 TCCTTTGTTTGCCGATGGATTCCGTAATGAAGTTCAAGTCATCAGCATTG    349
                     .||..||||.||.||.||.|||||.|||||||||||||||.|||||||.|
BL01217___pnp    300 CCCGCTGTTCGCAGACGGCTTCCGGAATGAAGTTCAAGTCGTCAGCATCG    349

BSNT_02709___    350 TCATGAGTGTTGACCAAAACTGCTCTTCAGAAATGGCTGCCATGTTCGGT    399
                     |||||||.||||||||..|.||.||.|||||||||||.||.|||||.||.
BL01217___pnp    350 TCATGAGCGTTGACCAGGATTGTTCGTCAGAAATGGCGGCAATGTTTGGA    399

BSNT_02709___    400 TCATCTCTTGCACTTTCTGTATCGGATATTCCGTTTGAAGGACCGATTGC    449
                     |||||||||||.||.|..|||||.||.||.|||||||||||.|||||.||
BL01217___pnp    400 TCATCTCTTGCGCTGTGCGTATCCGACATCCCGTTTGAAGGGCCGATCGC    449

BSNT_02709___    450 AGGGGTTACTGTCGGACGCATTGATGATCAATTTATCATTAACCCGACAG    499
                     .||.||.||.||.||.||..||||..|..||||.|||||.||.||||||.
BL01217___pnp    450 CGGAGTGACGGTAGGCCGGGTTGACAACAAATTCATCATCAATCCGACAC    499

BSNT_02709___    500 TCGATCAGCTTGAAAAAAGCGACATCAATCTTGTCGTTGCCGGCACGAAA    549
                     |.||.||||||||||||||||||||..||||.|||||.||.||.|||||.
BL01217___pnp    500 TTGAACAGCTTGAAAAAAGCGACATTCATCTCGTCGTAGCGGGAACGAAG    549

BSNT_02709___    550 GATGCGATTAACATGGTAGAAGCGGGAGCGGACGAAGTTCCTGAGGAAAT    599
                     ||.|||||.||||||||.|||||||||||.|||||||||||.||.||.||
BL01217___pnp    550 GACGCGATCAACATGGTTGAAGCGGGAGCAGACGAAGTTCCGGAAGAGAT    599

BSNT_02709___    600 CATGCTTGAGGCCATTATGTTCGGCCATGAAGAGATTAAACGCCTGATTG    649
                     |||||||||.||.||.||||||||.||.||.|||||.|||||.|||||||
BL01217___pnp    600 CATGCTTGAAGCGATCATGTTCGGTCACGAGGAGATCAAACGGCTGATTG    649

BSNT_02709___    650 CATTCCAAGAAGAAATTGTTGCAGCAGTCGGCAAAGAGAAATCTGAAATT    699
                     |.|||||.||.|||||.||.||.||.|||||.|||||.|||||.|||||.
BL01217___pnp    650 CCTTCCAGGAGGAAATCGTCGCCGCTGTCGGGAAAGAAAAATCAGAAATC    699

BSNT_02709___    700 AAGCTCTTTGAAATTGATGAAGAGCTTAATGAAAAAGT------AAAAGC    743
                     |..||.|.|||.||.|||...||.||.||.||||||||      ||    
BL01217___pnp    700 ACCCTGTATGAGATCGATTCCGATCTGAAAGAAAAAGTGCGGGGAA----    745

BSNT_02709___    744 TTTGGCAGAAGAGGATCTGCTGAAAGCCATCCAAGTTCATGAAAAGCATG    793
                       ||||.|||..|.|.||..|.||||||||.||.||||||||||||||||
BL01217___pnp    746 --TGGCCGAATCGAACCTCTTAAAAGCCATTCAGGTTCATGAAAAGCATG    793

BSNT_02709___    794 CCCGTGAAGATGCCATTAACGAAGTGAAGAACGCAGTTGTGGCAAAATTC    843
                     |.||.||.||.||.||.|.|||||||||.||||..|||.||||.||.||.
BL01217___pnp    794 CGCGCGAGGACGCGATCAGCGAAGTGAAAAACGAGGTTTTGGCCAAGTTT    843

BSNT_02709___    844 GAGGATGAAGAACATGATGAAGACACAATCAAGCAAGTGAAGCAGATTTT    893
                     ||.||.||.|||||.||||||||.||..|.||.||||||||..|.|||||
BL01217___pnp    844 GAAGAAGAGGAACACGATGAAGAAACGCTGAAACAAGTGAAAGACATTTT    893

BSNT_02709___    894 ATCCAAGCTGGTGAAAAATGAAGTTCGCCGCCTGATTACTGAAGAGAAAG    943
                     .|||.||||.||.|||||||||||.|||||.||||||||.||.||.||||
BL01217___pnp    894 GTCCCAGCTTGTTAAAAATGAAGTGCGCCGTCTGATTACGGAGGAAAAAG    943

BSNT_02709___    944 TAAGACCGGATGGCCGCGGTGTCGATCAAATCCGCCCGCTCTCTTCAGAG    993
                     |..|.||.||.|||.|.|.|||||||.|.|||||||||||.||||||||.
BL01217___pnp    944 TTCGTCCTGACGGCAGGGCTGTCGATGAGATCCGCCCGCTTTCTTCAGAA    993

BSNT_02709___    994 GTTGGCCT-CTTGCCAAGAACGCACGGTTCAGGTCTATTTACAAGGGGAC   1042
                     ||.||.|| ||| ||.|||||.|||||||||||.||.|||||||||||||
BL01217___pnp    994 GTCGGACTGCTT-CCGAGAACACACGGTTCAGGACTTTTTACAAGGGGAC   1042

BSNT_02709___   1043 AAACTCAGGCCCTCAGCGTATGTACGCTAGGTGCTCTGGGAGATGTGCAG   1092
                     |.||||||||.||||||.|.||||||||.|||||.||.||.|||||||||
BL01217___pnp   1043 AGACTCAGGCGCTCAGCATTTGTACGCTCGGTGCGCTTGGCGATGTGCAG   1092

BSNT_02709___   1093 ATCCTTGACGGCTTAGGTGTCGAAGAGTCGAAACGGTTTATGCATCATTA   1142
                     ||..|.|||||..|.||.||||||||.||.|||||.||||||||.|||||
BL01217___pnp   1093 ATTTTAGACGGTCTCGGCGTCGAAGAATCCAAACGCTTTATGCACCATTA   1142

BSNT_02709___   1143 CAACTTCCCGCAATTCAGCGTTGGGGAAACAGGACCGATGCGCGGACCGG   1192
                     ||||||||||||.||||||||.|||||||||||.|||||||||||.||||
BL01217___pnp   1143 CAACTTCCCGCAGTTCAGCGTCGGGGAAACAGGGCCGATGCGCGGGCCGG   1192

BSNT_02709___   1193 GACGTCGTGAAATCGGACACGGAGCACTGGGTGAGCGTGCGCTTGAGCCA   1242
                     ||||.||.||||||||.||||||||.||.||.||.||.|||||||||||.
BL01217___pnp   1193 GACGCCGCGAAATCGGGCACGGAGCCCTCGGGGAACGAGCGCTTGAGCCG   1242

BSNT_02709___   1243 GTTATTCCGTCTGAAAAAGACTTCCCTTATACTGTCCGTCTTGTTTCAGA   1292
                     .||.||||||||||||||||||||||.||.||..||||.||.||.||.||
BL01217___pnp   1243 ATTGTTCCGTCTGAAAAAGACTTCCCGTACACCATCCGCCTCGTCTCTGA   1292

BSNT_02709___   1293 AGTGCTTGAATCAAACGGTTCTACATCTCAAGCAAGCATTTGCGCAAGCA   1342
                     |||||||||||||||||||||.||.||.||.||.||||||||.|||||||
BL01217___pnp   1293 AGTGCTTGAATCAAACGGTTCCACTTCCCAGGCGAGCATTTGTGCAAGCA   1342

BSNT_02709___   1343 CACTTGCAATGATGGATGCTGGTGTACCGATTAAAGCGCCAGTTGCTGGT   1392
                     |.||.||.|||||||||||.||.||.|||||||||||.||.|||||.||.
BL01217___pnp   1343 CGCTAGCGATGATGGATGCAGGGGTGCCGATTAAAGCCCCGGTTGCCGGA   1392

BSNT_02709___   1393 ATTGCGATGGGTCTTGTCAAATCAGGCGAACATTACACTGTCTTGACTGA   1442
                     ||.|||||||||||||||||||||||.||..|.||.||.|||||.||.||
BL01217___pnp   1393 ATCGCGATGGGTCTTGTCAAATCAGGTGACAACTATACCGTCTTAACCGA   1442

BSNT_02709___   1443 CATCCAAGGCATGGAAGATGCGCTCGGAGATATGGACTTTAAAGTAGCGG   1492
                     .||.|||||.||||||||....|||||.|||||||||||||||||.||||
BL01217___pnp   1443 TATTCAAGGTATGGAAGACCATCTCGGGGATATGGACTTTAAAGTGGCGG   1492

BSNT_02709___   1493 GAACTGAAAAAGGCGTAACGGCCCTGCAAATGGACATTAAAATTGAAGGC   1542
                     ||||....||||||||.||.||.|||||||||||.|||||.||.||||||
BL01217___pnp   1493 GAACGTCCAAAGGCGTCACAGCTCTGCAAATGGATATTAAGATCGAAGGC   1542

BSNT_02709___   1543 CTTTCCAGAGAGATTCTTGAAGAAGCGCTTCAGCAGGCGAAAAAGGGCAG   1592
                     .|.||.|||||||||.|.|||||.||.|||||||||||||||||.|||||
BL01217___pnp   1543 TTATCGAGAGAGATTTTGGAAGAGGCTCTTCAGCAGGCGAAAAAAGGCAG   1592

BSNT_02709___   1593 AATGGAAATCCTCAACAGCATGCT-TGCAACATTAAGC-GAATCAAGAAA   1640
                     ||||||.|||||..|.|||||||| .|| ||||| .|| |||||||||||
BL01217___pnp   1593 AATGGAGATCCTTGAAAGCATGCTGAGC-ACATT-GGCTGAATCAAGAAA   1640

BSNT_02709___   1641 AGAGCTTTCTCGATATGCGCCTAAGATCTTAACAATGACCATTAATCCTG   1690
                     |||||||||||..||||||||.||.|||||.||.|||.|.||.|||||.|
BL01217___pnp   1641 AGAGCTTTCTCCTTATGCGCCGAAAATCTTGACGATGTCGATCAATCCGG   1690

BSNT_02709___   1691 ATAAAATCCGCGATGTCATCGGACCAAGCGGAAAACAAATCAATAAGATC   1740
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BL01217___pnp   1691 ATAAAATCCGCGACGTCATCGGACCAAGCGGAAAACAAATCAATAAGATC   1740

BSNT_02709___   1741 ATCGAAGAAACCGGTGTTAAAATTGATATTGAGCAGGACGGCACAATCTT   1790
                     ||.|||||.||.||.||||||||.||||||||.||.||||||||||||||
BL01217___pnp   1741 ATTGAAGATACAGGCGTTAAAATCGATATTGAACAAGACGGCACAATCTT   1790

BSNT_02709___   1791 TATTTCCTCTACAGATGAAAGCGGCAACCAAAAAGCGAAAAAAATCATCG   1840
                     .|||||.|||||.|||||||||...||||||||||||||.||||||||||
BL01217___pnp   1791 CATTTCTTCTACCGATGAAAGCATGAACCAAAAAGCGAAGAAAATCATCG   1840

BSNT_02709___   1841 AAGACCTTGTTAGAGAGGTTGAAGTCGGCCAACTTTACCTAGGTAAAGTG   1890
                     ||||||||||.|||||.|||||||||||.||.||||||.|||||||||||
BL01217___pnp   1841 AAGACCTTGTCAGAGAAGTTGAAGTCGGACAGCTTTACTTAGGTAAAGTG   1890

BSNT_02709___   1891 AAACGGATTGAAAAATTCGGGGCTTTCGTTGAAATTTTCAGCGGAAAAGA   1940
                     ||.|||||||||||||||||.||||||||||||.|.||||||||||||||
BL01217___pnp   1891 AAGCGGATTGAAAAATTCGGAGCTTTCGTTGAACTGTTCAGCGGAAAAGA   1940

BSNT_02709___   1941 CGGTTTGGTGCACATTTCAGAGCTTGCGCTTGAACGCGTAGGGAAAGTTG   1990
                     ||||.|.||.||.|||||||||||||||||.|||||.|||||.|||||.|
BL01217___pnp   1941 CGGTCTTGTCCATATTTCAGAGCTTGCGCTCGAACGGGTAGGAAAAGTCG   1990

BSNT_02709___   1991 AAGATGTTGTAAAAATCGGAGACGAGATTCTTGTCAAAGTCACTGAAATT   2040
                     |||||||.||.||||||||.||||||.|.|||||.||.||.||||||||.
BL01217___pnp   1991 AAGATGTCGTCAAAATCGGCGACGAGCTCCTTGTAAAGGTTACTGAAATC   2040

BSNT_02709___   2041 GATAAACAAGGACGAGTGAATTTATCCCGCAAAGCGGTGCTCCGTGAAGA   2090
                     ||||||||||||||.||.||.|||||..|.|||||.||.||.||||||.|
BL01217___pnp   2041 GATAAACAAGGACGCGTCAACTTATCAAGAAAAGCTGTACTGCGTGAACA   2090

BSNT_02709___   2091 GAAAGAAAAAGAAGAACAACAATCTTAA   2118
                     |||.|||||||||||||||.||||.|||
BL01217___pnp   2091 GAAGGAAAAAGAAGAACAAAAATCGTAA   2118


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