Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02712 and BL01214

See Amino acid alignment / Visit BSNT_02712 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence dna-align/BSNT_02712___ymxH.1.5803.seq
#    -bsequence dna-align/BL01214___ymxH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02712___ymxH-BL01214___ymxH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02712___ymxH-BL01214___ymxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02712___ymxH
# 2: BL01214___ymxH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity:     190/266 (71.4%)
# Similarity:   190/266 (71.4%)
# Gaps:          13/266 ( 4.9%)
# Score: 644.0
# 
#
#=======================================

BSNT_02712___      1 ATGCGGCTCAGTGAATTATCAGGAAAGGAAATTGTAGACATCAAAAGAGC     50
                     |||.||||.||||||.|.||.|||||.|||||.||.||..|.||..|.||
BL01214___ymx      1 ATGAGGCTGAGTGAACTTTCGGGAAAAGAAATCGTTGATGTTAAGCGGGC     50

BSNT_02712___     51 TGAACGGCTCGGAGTGCTCGGCCAGACCGATTTGGAAATCAATGAACAGG    100
                     .|||||||||||.||.||.||.|||||.||..|.||.||||||||.||||
BL01214___ymx     51 CGAACGGCTCGGCGTACTGGGGCAGACGGACCTTGAGATCAATGAGCAGG    100

BSNT_02712___    101 ATGGACAGATTACAGCACTCCTCATTCCCACAGTTAAGTGGTTTGGTTT-    149
                     |.||.||||||||.||.||..||||.||..|.|||||.|||||.||..| 
BL01214___ymx    101 ACGGTCAGATTACCGCTCTTATCATCCCTTCTGTTAAATGGTTCGGACTA    150

BSNT_02712___    150 --GAGAAAGCAAGGTCATGACATTCGTGTCCCATGGCACCATATTCAAAA    197
                       .|||||.||.||..||||||||...||.||.|||...||.||||||||
BL01214___ymx    151 GGAAGAAAACAGGGGAATGACATTAAGGTGCCCTGGTCGCAAATTCAAAA    200

BSNT_02712___    198 GATCGGTTCAGATATGATTATATTAGATGTACCTGAGGAAATGCCTCCTC    247
                     .|||||.||.||||||||.||.||.|||||.||   ||||| ||..|.| 
BL01214___ymx    201 AATCGGCTCGGATATGATCATTTTGGATGTTCC---GGAAA-GCAGCGT-    245

BSNT_02712___    248 GACAA-----GAGTAA    258
                     |||||     ||||||
BL01214___ymx    246 GACAAAAGAGGAGTAA    261


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