Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02715 and BL01213
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence dna-align/BSNT_02715___spoVFA.1.5803.seq
# -bsequence dna-align/BL01213___spoVFA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02715___spoVFA-BL01213___spoVFA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02715___spoVFA-BL01213___spoVFA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02715___spoVFA
# 2: BL01213___spoVFA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 923
# Identity: 647/923 (70.1%)
# Similarity: 647/923 (70.1%)
# Gaps: 52/923 ( 5.6%)
# Score: 2132.5
#
#
#=======================================
BSNT_02715___ 1 ATGTTAACCGGATTGAAAATTGCAGTTATCGGCGGTGACGCAAGACAGCT 50
||||||||||||||||..||||||.|.||||||||.||.|||||.|||||
BL01213___spo 1 ATGTTAACCGGATTGACGATTGCAATCATCGGCGGCGATGCAAGGCAGCT 50
BSNT_02715___ 51 CGAAATTATAAGAAAGCTCACTGAACAGCAGGCTGACATCTATCTTGTCG 100
|||.||.||..|.|||||.||.||||||.|.||..|..|||.|.|..|||
BL01213___spo 51 CGAGATCATCCGCAAGCTGACGGAACAGGATGCAAAGGTCTTTTTAATCG 100
BSNT_02715___ 101 GTTTTGACCAATTGGATCACGGTTTTACCGGGGC------AGTAAAATGC 144
|||||||.||..|.||||||||.||||||||.|| |.|||| ||
BL01213___spo 101 GTTTTGATCAGCTTGATCACGGGTTTACCGGAGCTACAAAACTAAA--GC 148
BSNT_02715___ 145 AATATTG-ATGAAATTCCTTTTCAGCA-AATAGACAGCATCATTCTTCCA 192
|| |.|||.||..|||| .||| ||||||||||||.|||||.||.
BL01213___spo 149 -----TGAACGAACTTGATTTT-GGCACAATAGACAGCATTATTCTGCCT 192
BSNT_02715___ 193 GTATCCGCGACAAC------AGGAGAAGGTGTCGTATCAACTGTATTTTC 236
|||||.|..|||.| |||| |.|||..|| |||||.|||||
BL01213___spo 193 GTATCGGGCACATCGATGGAAGGA-ACGGTTGCG-----ACTGTTTTTTC 236
BSNT_02715___ 237 TAATGAAGAAGTTGTGTTAAAACAGGACCATCTCGACAGAAC---GCCTG 283
.||||||.||||.||||||||||||||.|||.|.||.|.||| ||| |
BL01213___spo 237 CAATGAAAAAGTGGTGTTAAAACAGGAACATTTAGAAAAAACCAAGCC-G 285
BSNT_02715___ 284 CACATTGTGTCATTTTCTCAGGCATTTCTAACGTCTATTTAGAAAACATT 333
||| ||.|..||||..|||||.|||||.|||...||||||||...|||.
BL01213___spo 286 CAC--TGCGCGATTTATTCAGGGATTTCAAACCAATATTTAGACGGCATG 333
BSNT_02715___ 334 GCAGCTCA----GGCAAAAAGAAAACTTGTTAAACTGTTTGAGCGGGATG 379
|| || |||.||..|....|||.|.||.||.|||||..|.||.|
BL01213___spo 334 GC----CAAAGGGGCGAACCGTCGTCTTATCAAGCTCTTTGAAAGAGACG 379
BSNT_02715___ 380 ACATTGCGATATACAACTCTATTCCGACTGTAGAAGGAACGATCATGCTG 429
|.||||||||.||||||||.||.||.||.||.|||||..|.||.|||.||
BL01213___spo 380 ATATTGCGATTTACAACTCGATACCTACAGTCGAAGGTGCCATTATGATG 429
BSNT_02715___ 430 GCTATTCAGCACACGGATTATACGATACACGGATCACAGGTGGCCGTTCT 479
||.||.|||||.||.||.|.||||||.|||||.||..|.||....|||||
BL01213___spo 430 GCCATACAGCATACAGACTTTACGATTCACGGCTCGAATGTAATGGTTCT 479
BSNT_02715___ 480 CGGTCTGGGGCGCACCGGGATGACGATTGCCCGTACATTTGCCGCGCTCG 529
|||.||||||||.||.||.||||..||...|||.||.||..|.|||||||
BL01213___spo 480 CGGGCTGGGGCGGACGGGAATGAGCATCAGCCGGACGTTCTCGGCGCTCG 529
BSNT_02715___ 530 GGGCGAATGTAAAAGTGGGGGCAAGAAGTTCAGCGCATCTGGCACGTATC 579
|.||....||||||||.||.||..|....||.||.||.||.||..|.|||
BL01213___spo 530 GCGCACGCGTAAAAGTCGGAGCTCGCGACTCCGCCCACCTCGCCAGAATC 579
BSNT_02715___ 580 ACTGAAATGGGGCTCGTTCCTTTTCATACCGATGAGCTGAAAGAGCATGT 629
|..||.|||||.|||..||||||.||.||..|.||.||...|||||||||
BL01213___spo 580 ATGGAGATGGGCCTCACTCCTTTCCACACAAACGAACTTGCAGAGCATGT 629
BSNT_02715___ 630 AAAAGATATAGATATTTGCATTAATACCATACCGAGTATGATTTTAAATC 679
..||.||||.||.||.|||||.||||||||.||.||..|||||.|..||
BL01213___spo 630 TGAAAATATCGACATATGCATCAATACCATTCCAAGCCTGATTCTCGAT- 678
BSNT_02715___ 680 AAAC-GGTACTTTCTAGCATGACACCAAAAACCTTAATATTGGATCTGGC 728
|||| .||.||.||..|.||||||||.|.|||.|||||..|.|||.|.||
BL01213___spo 679 AAACATGTCCTCTCACGAATGACACCCAGAACATTAATTCTCGATTTAGC 728
BSNT_02715___ 729 CTCACGTCCCGGGGGAACGGATTTTAAATATGCCGAGAAACAAGGGATTA 778
..|.||||||||.||.||.||||||.|.|.||||||.||.|||||.||||
BL01213___spo 729 AACCCGTCCCGGAGGCACAGATTTTGATTTTGCCGAAAAGCAAGGCATTA 778
BSNT_02715___ 779 AAGCACTTCTTGCTCCCGGGCTTCCAGGGATTGTCGCTCCTAAAACAGCT 828
||||.||.||||||||.||.|||||.|||||.|||||.||||||||.||.
BL01213___spo 779 AAGCGCTGCTTGCTCCAGGACTTCCCGGGATCGTCGCGCCTAAAACGGCG 828
BSNT_02715___ 829 GGGCAAATCCTTGCAAACGTCTTGAGCAAGCTTTTGGCTGAAAT-ACAAG 877
||.||.|||.||||.||.||.|||.||||.||||||.|||||.| ||||
BL01213___spo 829 GGACAGATCATTGCCAATGTTTTGTGCAACCTTTTGTCTGAATTAACAA- 877
BSNT_02715___ 878 CTG------AGGAGGGGAAATAA 894
||| |||.|..|..||||
BL01213___spo 878 CTGACCGAAAGGGGCTGTCATAA 900
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