Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02721 and BL01208

See Amino acid alignment / Visit BSNT_02721 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:28
# Commandline: needle
#    -asequence dna-align/BSNT_02721___dapA.1.5803.seq
#    -bsequence dna-align/BL01208___dapA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02721___dapA-BL01208___dapA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02721___dapA-BL01208___dapA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02721___dapA
# 2: BL01208___dapA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 883
# Identity:     651/883 (73.7%)
# Similarity:   651/883 (73.7%)
# Gaps:          23/883 ( 2.6%)
# Score: 2293.5
# 
#
#=======================================

BSNT_02721___      1 ATGAATTTCGGAAATGTGTCTACAGCGATGATTACACCCTTTGACAATAA     50
                     |||||.|||||||||.|..|.||.||||||.||||.|||||||||||.||
BL01208___dap      1 ATGAACTTCGGAAATATCGCAACCGCGATGGTTACGCCCTTTGACAAAAA     50

BSNT_02721___     51 AGGGAACGTAGACTTTCAAAAACTGTCTACACTGATTGATTACTTGTTGA    100
                     .|..||..|.||.||||||||||||||.|..|||||.|||||.||..|.|
BL01208___dap     51 TGAAAATATCGATTTTCAAAAACTGTCAAAGCTGATCGATTATTTACTAA    100

BSNT_02721___    101 AAAACGGAACGGATTCTTTAGTAGTAGCGGGAACAACTGGAGAATCTCCG    150
                     |.||.||.||||||||..|.||.||.||.||||||||.||||||||.|||
BL01208___dap    101 ACAATGGGACGGATTCCCTGGTCGTTGCCGGAACAACCGGAGAATCGCCG    150

BSNT_02721___    151 ACCCTTTC--AACTGAAGAAAAAATTGCGCTTTTTGAATATACAGTAAAA    198
                     ||.|||||  ||  ||||||||..|.|||||..||.||||..|.||.||.
BL01208___dap    151 ACGCTTTCCGAA--GAAGAAAAGGTAGCGCTCATTCAATACTCTGTCAAG    198

BSNT_02721___    199 GAAGTAAACGGACGG--GTGCCC--GTTATCGCTGGTACTGGAAGCAACA    244
                     ||||    |||..||  ||||||  .|.|||||.||.||.||||||||||
BL01208___dap    199 GAAG----CGGCAGGCCGTGCCCCAATCATCGCCGGCACGGGAAGCAACA    244

BSNT_02721___    245 ACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTG    294
                     |||||||.|..||.||.||||||||.|||||||||||.|||||.||||..
BL01208___dap    245 ACACGAAGGCGTCGATCAAGCTGACGAAAAAAGCTGAAGAAGCCGGCGCT    294

BSNT_02721___    295 GACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGG    344
                     ||||||||.|||||.||.||.|||||.|||||.||.||||||||.|||||
BL01208___dap    295 GACGCTGTCATGCTCGTCACTCCGTACTACAACAAGCCTTCTCAGGAAGG    344

BSNT_02721___    345 AATGTACCAGCATTTTAAAGCAATTGCGGCAGAGACATCTCTTCCGGTTA    394
                     .|||||||..|||||.|.|||.|||||||..||.|||||.||.||.||.|
BL01208___dap    345 CATGTACCGCCATTTCAGAGCGATTGCGGAGGAAACATCGCTGCCTGTCA    394

BSNT_02721___    395 TTCTCTATAATGTTCCTGGCCGTACGGTTGCTTCTCTTGCTCCTGAAACG    444
                     |.||.||||||||.||.||..|.||||.||||||.||.||.||.||.|||
BL01208___dap    395 TGCTTTATAATGTGCCGGGAAGAACGGCTGCTTCGCTCGCACCAGAGACG    444

BSNT_02721___    445 ACGATCCGTTTGGCGGCAGACATTCCGAATGTGGTTGCGATTAAAGAAGC    494
                     ||.|||||..|.|||   ||.||.||||||.|..|.||.|||||||||||
BL01208___dap    445 ACAATCCGCCTTGCG---GAGATCCCGAATATTATCGCCATTAAAGAAGC    491

BSNT_02721___    495 GAGCGGAGACCTCGAAGCGATTACAAAAATTATTGCTGAAACACCTGAAG    544
                     ||||||.|||||.||.|||||.||||||||..|.||.|||||.|||||.|
BL01208___dap    492 GAGCGGCGACCTAGATGCGATAACAAAAATCGTAGCCGAAACCCCTGAGG    541

BSNT_02721___    545 ACTTCTATGTCTATTCAGGGGATGA-TGCTCTGACGCTTCCAATTCTTTC    593
                     ||||....||.||||||||.||||| .|| |||||.||.||....||.||
BL01208___dap    542 ACTTTGCAGTTTATTCAGGAGATGACAGC-CTGACACTGCCGGCGCTGTC    590

BSNT_02721___    594 AGTTGGAGGAAGAGGAGTTGTGTCAGTGGCGAGC-CATATTGCA--GGCA    640
                     .||.||||..||||||.|.||.||.||.|| |.| ||.||  ||  ||..
BL01208___dap    591 CGTGGGAGCGAGAGGAATCGTTTCCGTTGC-ATCACACAT--CATCGGAC    637

BSNT_02721___    641 CTGATATGCAGCAAATGATCAAAAATTATACGAATGGGCAAACAGCTAAT    690
                     |.||.||||||.|||||||||||.|||||||..|.|||.|.||.|||.|.
BL01208___dap    638 CGGAAATGCAGGAAATGATCAAACATTATACCGAGGGGAACACGGCTCAG    687

BSNT_02721___    691 GCGGCACTGATTCATCAGAAACTGCTGCCGATTATGAAGGAACTGTTTAA    740
                     ||.||..||||.|||||.||.|||||.|||.|.|||||.|..||.|||..
BL01208___dap    688 GCTGCTTTGATCCATCAAAAGCTGCTTCCGCTGATGAAAGGGCTTTTTGC    737

BSNT_02721___    741 AGCGCCTAATCCTGCTCCAGTCAAAACAGCGCTTCAGCTGAGAGGTCTTG    790
                     .||.||.||.||..|||||.|.||.||.||.||||||||||..|||||||
BL01208___dap    738 CGCACCGAACCCGTCTCCATTAAAGACGGCTCTTCAGCTGAAGGGTCTTG    787

BSNT_02721___    791 ATGTCGGTTCTGTGCGTCTGCCTCTAGTCCCGTTAACTGAGGATGAACGT    840
                     |.|||||.||.||.||.||.|||.|..|.|||.|||.|||.||||||||.
BL01208___dap    788 ACGTCGGGTCCGTCCGGCTCCCTTTGATTCCGCTAAATGAAGATGAACGA    837

BSNT_02721___    841 CTGAGCTTAAGCAGCACGATCAGCGAACTGTAA    873
                     ||..|.|||||||||..|||.|.||..||||||
BL01208___dap    838 CTCCGTTTAAGCAGCCTGATGAACGGCCTGTAA    870


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02721 and BL01208

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
