Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_02725 and BL01206

See Amino acid alignment / Visit BSNT_02725 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:28
# Commandline: needle
#    -asequence dna-align/BSNT_02725___tepA.1.5803.seq
#    -bsequence dna-align/BL01206___tepA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02725___tepA-BL01206___tepA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02725___tepA-BL01206___tepA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02725___tepA
# 2: BL01206___tepA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 754
# Identity:     584/754 (77.5%)
# Similarity:   584/754 (77.5%)
# Gaps:          23/754 ( 3.1%)
# Score: 2244.5
# 
#
#=======================================

BSNT_02725___      1 ATGGAT---CATCGTATGGAAAAC----ACAG--AAGAAGAGCGTCCTGA     41
                     ||||||   .|.||.||..|||||    ||||  |||..||||..||.|.
BL01206___tep      1 ATGGATTCAAACCGGATACAAAACGGGGACAGCCAAGGGGAGCAGCCGGC     50

BSNT_02725___     42 AAAAAATGATGCGAAGGACAGCATTATGAATAAAATACAGCAGCTTGGTG     91
                     .||..|.||.||.||.|||||..|..|.||.|||||.||||||||.||.|
BL01206___tep     51 TAAGCAGGACGCAAAAGACAGTCTCGTCAACAAAATCCAGCAGCTCGGCG    100

BSNT_02725___     92 AAACGACGCTTCCGCAGCTGCCCCAAGATACAAATATTCATTGTCTGACC    141
                     |||||||.||.||||||.||...||.||.||.||.|||||.||.||||||
BL01206___tep    101 AAACGACACTCCCGCAGATGGGGCAGGACACCAACATTCACTGCCTGACC    150

BSNT_02725___    142 ATTATCGGACAAATTGAAGGCCATGTTCAGCTTCCTCCGCAAAACAAAAC    191
                     ||||||||||||||||||||.||.||.|||||||||||.|||||||||||
BL01206___tep    151 ATTATCGGACAAATTGAAGGTCACGTCCAGCTTCCTCCCCAAAACAAAAC    200

BSNT_02725___    192 AACAAAATATGAACATGTCATCCCGCAGATTGTGGCAATTGAACAAAATC    241
                     ||||||.|||||||||||.||.||.|||||.||.|||.|.||.||.||||
BL01206___tep    201 AACAAAGTATGAACATGTGATTCCCCAGATCGTTGCAGTAGAGCAGAATC    250

BSNT_02725___    242 CCAAAATTGAAGGCTTGCTGATCATATTAAATACTGTCGGAGGAGATGTT    291
                     |.|||||.|||||..||||.|||||.|||||.||.|||||||||||.||.
BL01206___tep    251 CTAAAATCGAAGGTCTGCTCATCATCTTAAACACGGTCGGAGGAGACGTA    300

BSNT_02725___    292 GAAGCTGGTCTTGCAATAGCGGAAATGCTTGCATCTTTATCGAAACCGAC    341
                     |||||.||.|||||.||.|||||||||||.||.||..|.||.||.|||||
BL01206___tep    301 GAAGCGGGCCTTGCGATTGCGGAAATGCTGGCGTCCCTGTCAAAGCCGAC    350

BSNT_02725___    342 CGTTTCTATCGTGCTTGGCGGGGGGCATTCCATCGGCGTTCCGATTGCTG    391
                     .||.||||||||.||.|||||.||.|||||.|||||.|||||.||.||.|
BL01206___tep    351 GGTCTCTATCGTACTGGGCGGCGGACATTCAATCGGAGTTCCAATCGCAG    400

BSNT_02725___    392 TATCCTGTGATTACAGCTATATCGCCGAAACAGCAACGATGACGATTCAT    441
                     |.|||||.||..|||||||||||||.||||||||.|||||||||||.|||
BL01206___tep    401 TGTCCTGCGACCACAGCTATATCGCTGAAACAGCTACGATGACGATCCAT    450

BSNT_02725___    442 CCAGTTAGGCTCACCGGGCTGGTCATCGGGGTGCCGCAAACGTTTGAATA    491
                     ||.||.|||||.||.|||||.||||||||.||||||||.||.|||||.||
BL01206___tep    451 CCGGTCAGGCTGACAGGGCTTGTCATCGGTGTGCCGCAGACATTTGAGTA    500

BSNT_02725___    492 CTTGGATAAGATGCAAGAAAGAGTTGTTAAATTTGTGACAAGCCATTCCA    541
                     ..|.||.||.|||||.|||||.||..|.||.||.||||||||||||||||
BL01206___tep    501 TCTCGACAAAATGCAGGAAAGGGTCATCAATTTCGTGACAAGCCATTCCA    550

BSNT_02725___    542 ATATAACCGAAGAGAAATTTAAAGAGCTAATGTTTTCAAAAGGAAACTTA    591
                     |.|||.|.|||||.|||||||||||.||.||||||||||||||.||.|||
BL01206___tep    551 ACATATCGGAAGAAAAATTTAAAGAACTGATGTTTTCAAAAGGCAATTTA    600

BSNT_02725___    592 ACACGCGATATCGGAACAAATGTAGTCGGTAAGGATGCAGTTAAATACGG    641
                     ||.||.||.|||||.||.|||||.||.||.||.|||||.|||||||||||
BL01206___tep    601 ACCCGTGACATCGGGACGAATGTCGTAGGAAACGATGCGGTTAAATACGG    650

BSNT_02725___    642 ATTGATCGATCACGCAGGCGGTGTCGGACAGGC-AATCAATAAACTGAAT    690
                     |||.||||||.|..|.|||||.||||||||||| |.|||| ||.||||||
BL01206___tep    651 ATTAATCGATGAAACCGGCGGAGTCGGACAGGCGATTCAA-AAGCTGAAT    699

BSNT_02725___    691 GAGCTCATCG-ACGAAGCAAGG-----AAAGAAGAAGGACGGATGATTCA    734
                     ||..|.|||| ||.||.|||||     .|.||||      |||||||.||
BL01206___tep    700 GAATTAATCGAACAAAACAAGGGCGCCCAGGAAG------GGATGATCCA    743

BSNT_02725___    735 ATGA    738
                     ||||
BL01206___tep    744 ATGA    747


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02725 and BL01206

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
