Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02726 and BL01205

See Amino acid alignment / Visit BSNT_02726 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:28
# Commandline: needle
#    -asequence dna-align/BSNT_02726.1.5803.seq
#    -bsequence dna-align/BL01205.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02726-BL01205.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02726-BL01205.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02726
# 2: BL01205
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity:     143/234 (61.1%)
# Similarity:   143/234 (61.1%)
# Gaps:          39/234 (16.7%)
# Score: 404.0
# 
#
#=======================================

BSNT_02726         1 ATGATTCTTTATACCGTGATGCCGCAGGAAATTGTGTTTGCAGAACAG--     48
                     ||||||||.|||||....||||||||||||||.|||||.||||..|||  
BL01205            1 ATGATTCTGTATACGACAATGCCGCAGGAAATCGTGTTCGCAGGGCAGGC     50

BSNT_02726        49 ----AACCAAGAGACAAGCGCACAT-GAGCAAATTGAATATAAA-GGTGT     92
                         |||          .||.||.| .|.||.||.| ||.|||| ||.||
BL01205           51 GGAAAAC----------TCGAACTTAAAACAGATCG-ATGTAAACGGCGT     89

BSNT_02726        93 ACCGCTTCTAGTCGAAATGAAAGGGAATGAAGCGGAA--GTCATTCAAAT    140
                     .||.|||.|||||||.|||||.||..|.|||||  ||  |||.||||..|
BL01205           90 GCCCCTTTTAGTCGAGATGAACGGAGAGGAAGC--AAGGGTCGTTCAGGT    137

BSNT_02726       141 CATGAGCACCAATCCAATGCATTTTCTGCATCCGGACATTTCACCCGGAC    190
                     ..|.|||||.||.||.|||.|||||.|..|.|..||.|...|.||.||.|
BL01205          138 TCTCAGCACGAACCCGATGGATTTTTTAAAACAAGAAACGGCCCCTGGGC    187

BSNT_02726       191 AAAAGCTGAAATTAAAC-------GTATAA----    213
                     |.|.||     ||||||       .|||||    
BL01205          188 AGACGC-----TTAAACTGACATTTTATAAATAG    216


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.