Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02731 and BL01202
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence dna-align/BSNT_02731.1.5803.seq
# -bsequence dna-align/BL01202___yitG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02731-BL01202___yitG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02731-BL01202___yitG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02731
# 2: BL01202___yitG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1289
# Identity: 867/1289 (67.3%)
# Similarity: 867/1289 (67.3%)
# Gaps: 121/1289 ( 9.4%)
# Score: 2749.0
#
#
#=======================================
BSNT_02731 1 ATGTTGAG-AGAGAAAAGTGGA-ATGAAAAATATTATTGCATTGTCTTCC 48
||||| |||.|||| .|| |||||||..|||.||||..|||||||.
BL01202___yit 1 ---TTGAGCAGAAAAAA--AGACATGAAAAGCATTTTTGCGCTGTCTTCG 45
BSNT_02731 49 GTACCGCTTGTGATGACACTCGGGAACTCCATGCTGATTCCTGTTCTTCC 98
||.|||||.||||||||.|||||.||.||.|||||||||||.|||.|.||
BL01202___yit 46 GTCCCGCTCGTGATGACGCTCGGCAATTCGATGCTGATTCCGGTTTTGCC 95
BSNT_02731 99 GATGATGGAGAAAAAGCTGTCTGTGA-------CTTCATTTCAAGTATCT 141
|.||||.||.||||| .|.| ||||.|||||.||.||.
BL01202___yit 96 GGTGATCGAAAAAAA-------ATTAAACATTTCTTCGTTTCAGGTGTCG 138
BSNT_02731 142 TTAATCATTACTGTATATTCAGTAGTAGCAATTATTTGCATTCCGATTGC 191
||.|||||.||.||.||||||.|.||.||.|||.|.|||||.||||||.|
BL01202___yit 139 TTGATCATCACGGTTTATTCAATTGTGGCGATTGTATGCATCCCGATTAC 188
BSNT_02731 192 CGGATATTTGTCGGATCGTTTCGGGAGAAAAAAAATATTGCTTCCATGCC 241
|||.|||.|||||||.||.|||||.||||||||.||..||||.|||||||
BL01202___yit 189 CGGCTATATGTCGGACCGGTTCGGAAGAAAAAAGATCATGCTCCCATGCC 238
BSNT_02731 242 TCCTCATTGCAGGATTGGGGGGAGCCGTAGCTGCTTTTGCCTCGACCTAT 291
|.||.|||||.|||...||.|||||..||||.|.|||.||.||.||.|.|
BL01202___yit 239 TTCTGATTGCGGGAGCTGGAGGAGCGTTAGCAGGTTTGGCTTCAACTTTT 288
BSNT_02731 292 ATGAAAAATCCTTATGCTATGATCTTGGCGGGGCGGGTTCTTCAAGGCAT 341
.|.||..||||.|.|||.|||||.||.||.||.||.||.||||||||.||
BL01202___yit 289 TTCAATGATCCGTTTGCGATGATTTTAGCAGGTCGCGTCCTTCAAGGAAT 338
BSNT_02731 342 TGGTTCTGCAGGTGCCGCTCCGATTGTCATGCCGTTTATCGGCGACCTGT 391
.||.||.||.||.||.||.|||||.|||||||||||||||||||||.|||
BL01202___yit 339 CGGCTCAGCCGGCGCAGCGCCGATCGTCATGCCGTTTATCGGCGACTTGT 388
BSNT_02731 392 T-TAAAGGAGACGATGAAAAGGTCAGCGCGGGTCTTGGCGATATTGAAAC 440
| .||| |.||||||.|..||||||||||.||.||.|||||.||.||
BL01202___yit 389 TCCAAA----ATGATGAAGAAATCAGCGCGGGACTCGGAGATATAGAGAC 434
BSNT_02731 441 CGCCAACACGTCAGGGAAGGTACTGAGTCCCATACTTGGAGCCTTACTGG 490
.||.||.||..|.||.||.|||.|.||.||.|||.|.||.||.||..|.|
BL01202___yit 435 GGCAAATACTGCCGGCAAAGTATTAAGCCCGATATTAGGGGCTTTTTTAG 484
BSNT_02731 491 CTTCTTGGTATTGGTTTGTACCATTTTGGTTTATTCCGTT--TTTCTGTT 538
|.||||||..|||||...|.||.|||||||||||.|||.| |.|||.||
BL01202___yit 485 CATCTTGGGTTTGGTACATGCCGTTTTGGTTTATCCCGGTCGTGTCTCTT 534
BSNT_02731 539 TGATCAGCTTTTTGCTCGTATTGTTTTTGGTGGCCAAGCCTGAAG----A 584
..|||||||||.|||||.||||||||.||..||||.|| |||| |
BL01202___yit 535 --GCCAGCTTTTTTCTCGTCTTGTTTTTTGTTCCCAAACC-GAAGGACAA 581
BSNT_02731 585 AGATGAAGATGCGCCTGCTGTTTCTGAGTTTA------TT---AAGAGTG 625
||||||.||...||...| |||.| || ||.||.|
BL01202___yit 582 AGATGATGAAAAGCAAAC---------GTTAAAAAACTTTGCAAAAAGCG 622
BSNT_02731 626 TGAAGAAAATTTTTAAACAGGATGGTCGCTGGCTTTATACGGTCTTCA-- 673
|..||.|||||||.||||.|||.|||||.|||||| ||.|.||
BL01202___yit 623 TACAGGAAATTTTCAAACGGGAAGGTCGGTGGCTT------GTTTCCACT 666
BSNT_02731 674 ----TTATCGGGTGTGTCATTATGTTTTTGTTATTTGGCGTATTATTTTA 719
|.|||||..|..|.|||||||||.|.|||||.||.||..|.||.||
BL01202___yit 667 TTTGTCATCGGCGGAATTATTATGTTTCTTTTATTCGGAGTGCTCTTCTA 716
BSNT_02731 720 TTTATCAGATACGCTGGAGAACAAGTATGCTATTGACGGAGTAGCTAAAG 769
..|.||.|||||..|||||||.|||.||...||||||||..|.||.||||
BL01202___yit 717 CCTGTCGGATACTTTGGAGAAGAAGCATCAAATTGACGGGATTGCGAAAG 766
BSNT_02731 770 GCG-GATTACTGGCA--ATCCCAC----TTTTGTTTTTGTCAACCAGTTC 812
|.| |.|| || || ||.||.| ||||.|||..|| ||||||
BL01202___yit 767 GAGCGCTT-CT--CAGCATTCCGCTGCTTTTTCTTTCCGT----CAGTTC 809
BSNT_02731 813 TTTTATAGCTGGCAAAAAGATCGGTAAAGATAAAGGCCGAATGAAATTTT 862
.|...|.||.||.||...||||||.||.|||||...|.||||||...|.|
BL01202___yit 810 CTACCTTGCCGGAAAGCTGATCGGAAACGATAAGATCAGAATGAGGATCT 859
BSNT_02731 863 GCGTTGTTACAGGAATGATTCTGTTAACCCTTTCGTTTATTGCC---TTG 909
||||..|.|..||.|||||.|||.|..|..|.|||| ||||| |||
BL01202___yit 860 GCGTGCTGATCGGCATGATCCTGCTGGCTTTGTCGT---TTGCCGGTTTG 906
BSNT_02731 910 TGGTGGAACCACAGTTTTTATTTTTTATTTGTCTTTTTAAGCTTTGGCGG 959
||||||||||||||.|||||....||||||.|.|||.|...|.|.|||||
BL01202___yit 907 TGGTGGAACCACAGCTTTTACCCGTTATTTTTGTTTATGTCCATCGGCGG 956
BSNT_02731 960 GATTGGGATTGGAATGGCTCTTCCTGCTTTAGATGCACTGATAACCGAAG 1009
.||.||.||.|||||.||.||.|||.||||.|||||.|||||.|||||.|
BL01202___yit 957 CATCGGCATCGGAATTGCGCTCCCTTCTTTGGATGCGCTGATTACCGAGG 1006
BSNT_02731 1010 GGATTGAAAGTGAACAATGCGGAACCATTTCCTCCTTCTACAATAGCATG 1059
|.|||||||..|||.|..||||.||.||.||.||.||.|||||.||||||
BL01202___yit 1007 GAATTGAAAAAGAAGAGCGCGGCACGATATCTTCGTTTTACAACAGCATG 1056
BSNT_02731 1060 CGCTTTATAGGAGTAGCTCTCGGTCCACCTGTTTTTGCTGCATTA--ATG 1107
.|.|||||.||.||.||.|||||.||.||.|||||.|| |..|| |||
BL01202___yit 1057 AGGTTTATCGGTGTTGCGCTCGGACCGCCGGTTTTCGC--CTATATGATG 1104
BSNT_02731 1108 TCTAATGCAAACTGGATTATTTTCATACTCTCGGCGTTT-TGCAGCATCG 1156
.|.|||||....|||.|.||||||||..|.|| ||.||| |||||..|.|
BL01202___yit 1105 ACAAATGCGGGGTGGCTGATTTTCATCGTATC-GCTTTTGTGCAGTTTAG 1153
BSNT_02731 1157 TTTCTTTA----TTTTTAGTGCTCTTTACTGTAGATGCTAAAAAAAGTGA 1202
.|.|..|| || |||||.||||.|.|.||..|.||| ||
BL01202___yit 1154 CTGCACTAGCGCTT----GTGCTGTTTAATATTGACCCGAAA------GA 1193
BSNT_02731 1203 AGAAGAA---GAA-----AAAAACTTAGGGACGGTCTAG 1233
|||.||| ||| ||| ||||||.|||
BL01202___yit 1194 AGACGAAAGTGAAGCGGCAAA--------GACGGTGTAG 1224
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