Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02732 and BL01201
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence dna-align/BSNT_02732.1.5803.seq
# -bsequence dna-align/BL01201___ymfG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02732-BL01201___ymfG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02732-BL01201___ymfG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02732
# 2: BL01201___ymfG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1322
# Identity: 948/1322 (71.7%)
# Similarity: 948/1322 (71.7%)
# Gaps: 82/1322 ( 6.2%)
# Score: 3179.5
#
#
#=======================================
BSNT_02732 1 ATGTCATATGTTAATGAACTCAAATCAAAGCACGGCGGTTTAAC-CGCAC 49
|||.||||..||||.|||.|.|||..|||||||.||||.||.|| .|| |
BL01201___ymf 1 ATGACATACCTTAACGAAATAAAAGGAAAGCACCGCGGATTGACAAGC-C 49
BSNT_02732 50 ATATTGTAAAAACAGAAAAATTCAAAACCGTCTCGCTTATTTTTAAGATG 99
|.|||||.|||||.|||||||||||||||||||||.||||||||||.|||
BL01201___ymf 50 ACATTGTCAAAACGGAAAAATTCAAAACCGTCTCGATTATTTTTAAAATG 99
BSNT_02732 100 CTTGCGCCGCTGACAAAGGATCAAGTCACCAAAAGAGCGCTTCTCCCGCA 149
|||||.||..|.|||||.||..|.||.||.||.||.||||||.|.|||||
BL01201___ymf 100 CTTGCTCCTTTAACAAAAGAGGATGTGACAAAGAGGGCGCTTTTTCCGCA 149
BSNT_02732 150 TGTGCTTCTTCGCGGAACGAAAAGCCATCCGAAAACCGCAGAATTGCGTT 199
|||||||.|.||.|||||||..|.||..||.|||||.||.|||.|..|.|
BL01201___ymf 150 TGTGCTTTTGCGGGGAACGAGCACCCGCCCCAAAACGGCCGAACTCAGAT 199
BSNT_02732 200 CATA-CTTGGATGAGCTGTACGGCACGTCAGTATC-GGCTGATCTTACGA 247
|.|| ||| |||||.||.||||||||.||.||||| .|| |||||..|.|
BL01201___ymf 200 CGTATCTT-GATGAACTTTACGGCACTTCCGTATCATGC-GATCTCTCCA 247
BSNT_02732 248 AAAAAGGAGAGCGGCACGTCATTACGTTCAGGCTTGAAATTCCGAATGAA 297
|||||||.||...|||.|||||.||.||||||||.||.||..|.||.|||
BL01201___ymf 248 AAAAAGGGGAAATGCATGTCATCACATTCAGGCTCGATATCGCTAACGAA 297
BSNT_02732 298 AAATATTTAAAAGACCAAACGCCGCTACTTGAGAAAGGGCTCCAGCTTCT 347
||||.||||||.||.||.||.|||||.||.||.||||||||..|||||.|
BL01201___ymf 298 AAATTTTTAAAGGATCAGACACCGCTTCTGGAAAAAGGGCTTGAGCTTTT 347
BSNT_02732 348 CGCAGAAATCGTCTTTTCACCTGCTTTAGAGGGAGAC---GCTTTTCAGT 394
..||||.|||.|.|||||.||.||..|.|| |||| ||.||||.|.
BL01201___ymf 348 GTCAGAGATCATTTTTTCGCCGGCGCTTGA---AGACGGGGCCTTTCTGC 394
BSNT_02732 395 CACAATATGTGGCTCAAGAAAAACGGACGCTTAAGCAAAGAATCCAAGCC 444
|.|..||.|||.||||.||||||||.||.||.|||||||||||.||.||.
BL01201___ymf 395 CGCTGTACGTGTCTCAGGAAAAACGCACACTAAAGCAAAGAATACAGGCG 444
BSNT_02732 445 GTCTATGATGATAAAATGCGCTATTCGAATTTAAGGCTGATACAGGAAAT 494
||||||.|.||.||||||||||||||.|||||.||||||||.|||||.||
BL01201___ymf 445 GTCTATAACGACAAAATGCGCTATTCAAATTTGAGGCTGATTCAGGAGAT 494
BSNT_02732 495 GTGCAAAAATGAGCCTTACGCGCTTCATGTCAATGGTGAAATCGACGATG 544
|||||||.|||||||.|||||||||||.|||||.||.||..|.||.||||
BL01201___ymf 495 GTGCAAAGATGAGCCATACGCGCTTCACGTCAACGGAGAGCTTGATGATG 544
BSNT_02732 545 TTGATGACATTACG--GCAGAGCAATTATACGAAACATACCAAAGCGCTA 592
|.||.|.|||.||| .||.||| .|.||.|||.|.||.||||..||..
BL01201___ymf 545 TGGACGGCATCACGCCTCAAAGC--CTGTATGAAGCTTATCAAAAAGCGG 592
BSNT_02732 593 TCCAAAAAGACCAGCTTGATCTATATGTTGTTGGCGACGTGGA----CAG 638
||....||||||||||.||..|.||.||.|||||.||.||||| |||
BL01201___ymf 593 TCAGCGAAGACCAGCTCGACATTTACGTCGTTGGGGATGTGGATGAGCAG 642
BSNT_02732 639 TAACCAGGTACAATCGGCAATTGATAAGTATTTCAAAACAGAAGAGCG-- 686
|||||..|.|||...|||...||.||.||..||.||.|.|||||
BL01201___ymf 643 ----CAGGTGGATTCGTACATTTCCAAATACTTTGAAGCAAACGAGCGGG 688
BSNT_02732 687 --------CACTCTTGGCACGA--TTGAAAACAATCACGCTGATGAAAAA 726
| ||.|| |.||| ||| |.|||.|.||| |.||
BL01201___ymf 689 AGCTGAGAC-CTGTT--CCCGAGCTTG--AGCAAACCCGC------ACAA 727
BSNT_02732 727 GTTCAGCCAAAAGAAGTAATTGATGAAGAGGATGTCAAGCAAGGAAAACT 776
| ..||||..|.|||||.||.||.||.|..||||||||||||||.||.||
BL01201___ymf 728 G-GGAGCCTCAGGAAGTCATCGAGGATGCTGATGTCAAGCAAGGGAAGCT 776
BSNT_02732 777 GAATATCGGCT-----ACCGCACCAGCATCACTTATACAGATCAGGATTA 821
|||.||.||.| ||.|.|.| ||| ||.|||.|||.|.|||||
BL01201___ymf 777 GAACATGGGATTTCGGACGGGAAC-GCA----TTTTACGGATGACGATTA 821
BSNT_02732 822 TCCTGCTTTACAAGTGTTTAACGGATTGTTCGGCGGATTCTCTCATTCTA 871
|||.||..|.||..||||||||||.|||||.||||||||.||.|||||.|
BL01201___ymf 822 TCCGGCGCTTCAGCTGTTTAACGGCTTGTTTGGCGGATTTTCACATTCCA 871
BSNT_02732 872 AACTTTTCATTAATGTTCGGGAAAAAGCCAGTCTTGCTTACTACGCGGCT 921
|.||.||.||||||||..|||||||.|||||.|||||.||.||.||||||
BL01201___ymf 872 AGCTGTTTATTAATGTCAGGGAAAAGGCCAGCCTTGCCTATTATGCGGCT 921
BSNT_02732 922 TCGCGTATAGAAAGTTTTAAAGGCTTGTTAATGGTGATGTCAGGCATTGA 971
||..|.||.|||||.||||||||..||||.|||||||||||.||.|||||
BL01201___ymf 922 TCCAGAATCGAAAGCTTTAAAGGGCTGTTGATGGTGATGTCGGGGATTGA 971
BSNT_02732 972 AGTGAAAAATTTTGAACAGGCGGTTTCG--ATTATTGCTGAGCAATTCCA 1019
|||....||||.|.||.|.||.| ||| ||.||....|||||.||.||
BL01201___ymf 972 AGTCGGCAATTATCAAAAAGCCG--TCGACATCATCAAGGAGCAGTTTCA 1019
BSNT_02732 1020 GGCAATGAAAAATGGC-GATTT-CAATGAGCAGGATATAGCACAGACAAA 1067
||.|||||||||.||| |.||| || ||..|||..||.|..|||||.||
BL01201___ymf 1020 GGAAATGAAAAAAGGCAGCTTTACA--GAAGAGGCAATCGACCAGACGAA 1067
BSNT_02732 1068 GGCCGTTATTCGAAATCAAGTGCTGGAAACGATTGATACAGCATACGGTT 1117
.|||||.|||..|||.||..|.||.||||||.||||||||.|.|||||||
BL01201___ymf 1068 AGCCGTCATTAAAAACCAGATTCTTGAAACGCTTGATACACCGTACGGTT 1117
BSNT_02732 1118 TA-TCTGAGTTTTTATATCAGCAGGCCGCTGCTCAAGTCGAGA--TTCCT 1164
|| || ||.|||.|.|||||||||||.||.||.|||..||| | |||||
BL01201___ymf 1118 TAGTC-GAATTTATTTATCAGCAGGCTGCCGCCCAAACCGA-ATTTTCCT 1165
BSNT_02732 1165 ATCGAAGACTTTCTTGCAAATATTGAGAATGTCACAAAAGAGGATATCAT 1214
|.|||||||..||.|.|...||.||.||||||||||||||.||.|||||
BL01201___ymf 1166 -TGGAAGACTGGCTGGGACGAATCGACAATGTCACAAAAGAAGACATCAT 1214
BSNT_02732 1215 TAAAGCCGG--CGAAAA--GATTCAGCTTGATACGACTTA-TTTCTTAAA 1259
..|||.||| .||||| |||| |.|||||.||.|| |||| |.||
BL01201___ymf 1215 CGAAGTCGGAAAGAAAATCGATT----TGGATACAACGTACTTTC-TCAA 1259
BSNT_02732 1260 AGGGACGGAGGGTGCATCTTGA 1281
||||||||||||.|||||||||
BL01201___ymf 1260 AGGGACGGAGGGAGCATCTTGA 1281
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