Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02734 and BL01199
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence dna-align/BSNT_02734___ymfI.1.5803.seq
# -bsequence dna-align/BL01199___fabG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02734___ymfI-BL01199___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02734___ymfI-BL01199___fabG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02734___ymfI
# 2: BL01199___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 774
# Identity: 526/774 (68.0%)
# Similarity: 526/774 (68.0%)
# Gaps: 87/774 (11.2%)
# Score: 1657.5
#
#
#=======================================
BSNT_02734___ 1 ATGAACAAAAC-AGCACTAATCACCGGAGCAAGCGGCGGCATTGGCAAAA 49
||| ||||||| .||.||.||||||||.|||||||||||.||.||..|||
BL01199___fab 1 ATG-ACAAAACTCGCTCTCATCACCGGCGCAAGCGGCGGAATCGGGCAAA 49
BSNT_02734___ 50 GCATCAGCGAAACCCTTGCAGCTAGA-GGATACAATCTGCTGCTGCATTA 98
||||||||||||..||||| ||.|.| ||.||..||||.||.||.|||||
BL01199___fab 50 GCATCAGCGAAAAGCTTGC-GCAAAACGGGTATGATCTTCTCCTCCATTA 98
BSNT_02734___ 99 CAATACAAATCAAAATGCGGCAGCGGAGCTTGCTGAAAAACTAAGTCAGA 148
..||||||||.|.||.|||||.||....|||||.||||..|| ||||.|
BL01199___fab 99 TCATACAAATGAGAAGGCGGCCGCTTCACTTGCAGAAAGGCT--GTCACA 146
BSNT_02734___ 149 T--GTTTGGCGTAAATGCGGAGAT-ATTACAAGCTGATCTGTCCG-CGCA 194
| .|..|||.|..|.||.||.|| ||| ||.|..||.||||||| |.|.
BL01199___fab 147 TACATACGGCATTCACGCTGAAATCATT-CACGGCGACCTGTCCGACCCC 195
BSNT_02734___ 195 AGATGGAGCAGATAA--------GCTGACAAGTTCAATTGTTCAGC---- 232
.|| ||.||| |.|| |||..|| ||.||
BL01199___fab 196 GGA-GGTGCA-AAAACCGTTTCCGCTTCCA-----------TCGGCGGAC 232
BSNT_02734___ 233 -----CTATTGATGCGATTGTTTTAAACAGTGGAAGAAGCCATTTT---- 273
||| ||.|..||.||.||.|||||.|||..|||| ||
BL01199___fab 233 GGGCGCTA--GACGGCATCGTCTTGAACAGCGGACAAAGC----TTCCGC 276
BSNT_02734___ 274 GGGCTGATTACGGATGTAGATAAC----GCAACAGTCCAGGAAATGGTTC 319
|||||..|.||.||| ||.|| |.|.|.||.|||||.|||||.|
BL01199___fab 277 GGGCTTGTGACAGAT----ATGACCGATGAAGCTGTACAGGACATGGTGC 322
BSNT_02734___ 320 AGCTTCATGTGGCGAGTCCGTATATGCTGACGAGAAACCTTCTGCCAGGC 369
||||.|||||..|.||.||||.|.|..|.|||||.||.||.||.|| |||
BL01199___fab 323 AGCTCCATGTCTCAAGCCCGTTTCTATTAACGAGGAATCTGCTTCC-GGC 371
BSNT_02734___ 370 -ATGATTCGGAATAAATCGGGAGCGATTGTGGCTGTCAGCTCGATTTGGG 418
|||||..||||.||.||.||.||.|||||.||.||||||||.|||||||
BL01199___fab 372 GATGATCAGGAAAAAGTCCGGCGCTATTGTAGCCGTCAGCTCTATTTGGG 421
BSNT_02734___ 419 GAGAGACTGGAGCATCCTGTGAAGTGCTGTACAGCATGGCAAAAGGAGCT 468
|.|||||.||.||.||.||.|||||..|.|||||||||.|||||||.||.
BL01199___fab 422 GTGAGACAGGGGCGTCGTGCGAAGTTTTATACAGCATGACAAAAGGCGCG 471
BSNT_02734___ 469 CAGCATTCGTTTGTAAAAGGATTGGCTAAGGAGCTGGCGCCAAGCGGAAT 518
||..||..||||||.||||...|.||.||.|||||.|||||.|||||.||
BL01199___fab 472 CAAAATGTGTTTGTCAAAGCCCTTGCAAAAGAGCTTGCGCCGAGCGGCAT 521
BSNT_02734___ 519 CAGAGTAAACGCCGTAGCGCCGGGCGCAGTTGATACAAATATGATGA-AT 567
||||||.|||||.||..|.||||||||.||..|.|||||.||||||| .|
BL01199___fab 522 CAGAGTCAACGCTGTTTCTCCGGGCGCTGTAAAAACAAAGATGATGAGCT 571
BSNT_02734___ 568 CAATTTACCCCGGCTGAAA-----AAGAAGA---GATCGCTGATGAGATT 609
||.|| |.||| ||||||| ||||||.|||||||||
BL01199___fab 572 CATTT---------TCAAAAGAGGAAGAAGAGATGATCGCCGATGAGATT 612
BSNT_02734___ 610 CCGATCGGCCGGCTGGCCCG--GCCGCAAGAAATTGCTGATGCAACAGCT 657
|||||.||..||||.| ||| |||| ||||..||||.||.|| |..||
BL01199___fab 613 CCGATGGGAAGGCTCG-CCGAAGCCG-AAGAGGTTGCAGACGC--CGTCT 658
BSNT_02734___ 658 --TTTCTCCTGTCTGAAAAAGCGTCATATATCACCGGCCAAATTCTGTCG 705
|||||.||.||.|..|||||.||.||||||||.||.||||||.||||.
BL01199___fab 659 TGTTTCTGCTCTCGGCGAAAGCATCTTATATCACGGGTCAAATTTTGTCA 708
BSNT_02734___ 706 GTGAATGGCGGCTGGCACTGTTGA 729
||.||||||||||||||.||||.|
BL01199___fab 709 GTTAATGGCGGCTGGCATTGTTAA 732
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