Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02734 and BL01199

See Amino acid alignment / Visit BSNT_02734 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence dna-align/BSNT_02734___ymfI.1.5803.seq
#    -bsequence dna-align/BL01199___fabG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02734___ymfI-BL01199___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02734___ymfI-BL01199___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02734___ymfI
# 2: BL01199___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 774
# Identity:     526/774 (68.0%)
# Similarity:   526/774 (68.0%)
# Gaps:          87/774 (11.2%)
# Score: 1657.5
# 
#
#=======================================

BSNT_02734___      1 ATGAACAAAAC-AGCACTAATCACCGGAGCAAGCGGCGGCATTGGCAAAA     49
                     ||| ||||||| .||.||.||||||||.|||||||||||.||.||..|||
BL01199___fab      1 ATG-ACAAAACTCGCTCTCATCACCGGCGCAAGCGGCGGAATCGGGCAAA     49

BSNT_02734___     50 GCATCAGCGAAACCCTTGCAGCTAGA-GGATACAATCTGCTGCTGCATTA     98
                     ||||||||||||..||||| ||.|.| ||.||..||||.||.||.|||||
BL01199___fab     50 GCATCAGCGAAAAGCTTGC-GCAAAACGGGTATGATCTTCTCCTCCATTA     98

BSNT_02734___     99 CAATACAAATCAAAATGCGGCAGCGGAGCTTGCTGAAAAACTAAGTCAGA    148
                     ..||||||||.|.||.|||||.||....|||||.||||..||  ||||.|
BL01199___fab     99 TCATACAAATGAGAAGGCGGCCGCTTCACTTGCAGAAAGGCT--GTCACA    146

BSNT_02734___    149 T--GTTTGGCGTAAATGCGGAGAT-ATTACAAGCTGATCTGTCCG-CGCA    194
                     |  .|..|||.|..|.||.||.|| ||| ||.|..||.||||||| |.|.
BL01199___fab    147 TACATACGGCATTCACGCTGAAATCATT-CACGGCGACCTGTCCGACCCC    195

BSNT_02734___    195 AGATGGAGCAGATAA--------GCTGACAAGTTCAATTGTTCAGC----    232
                     .|| ||.||| |.||        |||..||           ||.||    
BL01199___fab    196 GGA-GGTGCA-AAAACCGTTTCCGCTTCCA-----------TCGGCGGAC    232

BSNT_02734___    233 -----CTATTGATGCGATTGTTTTAAACAGTGGAAGAAGCCATTTT----    273
                          |||  ||.|..||.||.||.|||||.|||..||||    ||    
BL01199___fab    233 GGGCGCTA--GACGGCATCGTCTTGAACAGCGGACAAAGC----TTCCGC    276

BSNT_02734___    274 GGGCTGATTACGGATGTAGATAAC----GCAACAGTCCAGGAAATGGTTC    319
                     |||||..|.||.|||    ||.||    |.|.|.||.|||||.|||||.|
BL01199___fab    277 GGGCTTGTGACAGAT----ATGACCGATGAAGCTGTACAGGACATGGTGC    322

BSNT_02734___    320 AGCTTCATGTGGCGAGTCCGTATATGCTGACGAGAAACCTTCTGCCAGGC    369
                     ||||.|||||..|.||.||||.|.|..|.|||||.||.||.||.|| |||
BL01199___fab    323 AGCTCCATGTCTCAAGCCCGTTTCTATTAACGAGGAATCTGCTTCC-GGC    371

BSNT_02734___    370 -ATGATTCGGAATAAATCGGGAGCGATTGTGGCTGTCAGCTCGATTTGGG    418
                      |||||..||||.||.||.||.||.|||||.||.||||||||.|||||||
BL01199___fab    372 GATGATCAGGAAAAAGTCCGGCGCTATTGTAGCCGTCAGCTCTATTTGGG    421

BSNT_02734___    419 GAGAGACTGGAGCATCCTGTGAAGTGCTGTACAGCATGGCAAAAGGAGCT    468
                     |.|||||.||.||.||.||.|||||..|.|||||||||.|||||||.||.
BL01199___fab    422 GTGAGACAGGGGCGTCGTGCGAAGTTTTATACAGCATGACAAAAGGCGCG    471

BSNT_02734___    469 CAGCATTCGTTTGTAAAAGGATTGGCTAAGGAGCTGGCGCCAAGCGGAAT    518
                     ||..||..||||||.||||...|.||.||.|||||.|||||.|||||.||
BL01199___fab    472 CAAAATGTGTTTGTCAAAGCCCTTGCAAAAGAGCTTGCGCCGAGCGGCAT    521

BSNT_02734___    519 CAGAGTAAACGCCGTAGCGCCGGGCGCAGTTGATACAAATATGATGA-AT    567
                     ||||||.|||||.||..|.||||||||.||..|.|||||.||||||| .|
BL01199___fab    522 CAGAGTCAACGCTGTTTCTCCGGGCGCTGTAAAAACAAAGATGATGAGCT    571

BSNT_02734___    568 CAATTTACCCCGGCTGAAA-----AAGAAGA---GATCGCTGATGAGATT    609
                     ||.||         |.|||     |||||||   ||||||.|||||||||
BL01199___fab    572 CATTT---------TCAAAAGAGGAAGAAGAGATGATCGCCGATGAGATT    612

BSNT_02734___    610 CCGATCGGCCGGCTGGCCCG--GCCGCAAGAAATTGCTGATGCAACAGCT    657
                     |||||.||..||||.| |||  |||| ||||..||||.||.||  |..||
BL01199___fab    613 CCGATGGGAAGGCTCG-CCGAAGCCG-AAGAGGTTGCAGACGC--CGTCT    658

BSNT_02734___    658 --TTTCTCCTGTCTGAAAAAGCGTCATATATCACCGGCCAAATTCTGTCG    705
                       |||||.||.||.|..|||||.||.||||||||.||.||||||.||||.
BL01199___fab    659 TGTTTCTGCTCTCGGCGAAAGCATCTTATATCACGGGTCAAATTTTGTCA    708

BSNT_02734___    706 GTGAATGGCGGCTGGCACTGTTGA    729
                     ||.||||||||||||||.||||.|
BL01199___fab    709 GTTAATGGCGGCTGGCATTGTTAA    732


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