Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02735 and BL01198
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence dna-align/BSNT_02735___ymfJ.1.5803.seq
# -bsequence dna-align/BL01198___ymfJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02735___ymfJ-BL01198___ymfJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02735___ymfJ-BL01198___ymfJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02735___ymfJ
# 2: BL01198___ymfJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity: 197/260 (75.8%)
# Similarity: 197/260 (75.8%)
# Gaps: 4/260 ( 1.5%)
# Score: 709.0
#
#
#=======================================
BSNT_02735___ 1 ATGTCAGTATTAGAAAACTGGGAT-AGCTGGAAAAACTTCCTTGGCGACC 49
|||||.|||.|.||.||.|||||| || |||||||||||..|.|||||||
BL01198___ymf 1 ATGTCCGTACTGGATAATTGGGATCAG-TGGAAAAACTTTTTGGGCGACC 49
BSNT_02735___ 50 GTCTGAACTATGCGCAAGATAAAGGTATGAGCCAGGATACGATTACAGAT 99
||.||||||||||.|||||..||||.|||....|.||.||.||..|||||
BL01198___ymf 50 GTTTGAACTATGCCCAAGAACAAGGAATGTCAAAAGAAACCATCTCAGAT 99
BSNT_02735___ 100 CTTGCGACA-GAAATCGGCAGCTACTTGGCTAATGAAGTGGAATCTAAGA 148
||||| |.| ||.||||||...||.|||||...|||.||.||.||.||.|
BL01198___ymf 100 CTTGC-ATATGAGATCGGCGATTATTTGGCCGGTGAGGTTGATTCAAAAA 148
BSNT_02735___ 149 ACGAGCAGGAAAAAGTGCTGGCAGATCTTTGGAGTGTAGCATCAAAAGAT 198
||.|.||.|||..||||||.|||||.||||||||.||.||.||..||||.
BL01198___ymf 149 ACCATCAAGAACGAGTGCTCGCAGACCTTTGGAGCGTGGCTTCCGAAGAA 198
BSNT_02735___ 199 GAACAGCACGCCATTGCCAATATGATGGTTAAGCTTGTTGAAAATAACAG 248
||.||||.|||||||||.||..||||||||||||||||||||||.|||||
BL01198___ymf 199 GAGCAGCGCGCCATTGCGAACGTGATGGTTAAGCTTGTTGAAAACAACAG 248
BSNT_02735___ 249 CACTCACTAG 258
|.|.||.||.
BL01198___ymf 249 CTCACATTAA 258
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