Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02735 and BL01198

See Amino acid alignment / Visit BSNT_02735 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence dna-align/BSNT_02735___ymfJ.1.5803.seq
#    -bsequence dna-align/BL01198___ymfJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02735___ymfJ-BL01198___ymfJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02735___ymfJ-BL01198___ymfJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02735___ymfJ
# 2: BL01198___ymfJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     197/260 (75.8%)
# Similarity:   197/260 (75.8%)
# Gaps:           4/260 ( 1.5%)
# Score: 709.0
# 
#
#=======================================

BSNT_02735___      1 ATGTCAGTATTAGAAAACTGGGAT-AGCTGGAAAAACTTCCTTGGCGACC     49
                     |||||.|||.|.||.||.|||||| || |||||||||||..|.|||||||
BL01198___ymf      1 ATGTCCGTACTGGATAATTGGGATCAG-TGGAAAAACTTTTTGGGCGACC     49

BSNT_02735___     50 GTCTGAACTATGCGCAAGATAAAGGTATGAGCCAGGATACGATTACAGAT     99
                     ||.||||||||||.|||||..||||.|||....|.||.||.||..|||||
BL01198___ymf     50 GTTTGAACTATGCCCAAGAACAAGGAATGTCAAAAGAAACCATCTCAGAT     99

BSNT_02735___    100 CTTGCGACA-GAAATCGGCAGCTACTTGGCTAATGAAGTGGAATCTAAGA    148
                     ||||| |.| ||.||||||...||.|||||...|||.||.||.||.||.|
BL01198___ymf    100 CTTGC-ATATGAGATCGGCGATTATTTGGCCGGTGAGGTTGATTCAAAAA    148

BSNT_02735___    149 ACGAGCAGGAAAAAGTGCTGGCAGATCTTTGGAGTGTAGCATCAAAAGAT    198
                     ||.|.||.|||..||||||.|||||.||||||||.||.||.||..||||.
BL01198___ymf    149 ACCATCAAGAACGAGTGCTCGCAGACCTTTGGAGCGTGGCTTCCGAAGAA    198

BSNT_02735___    199 GAACAGCACGCCATTGCCAATATGATGGTTAAGCTTGTTGAAAATAACAG    248
                     ||.||||.|||||||||.||..||||||||||||||||||||||.|||||
BL01198___ymf    199 GAGCAGCGCGCCATTGCGAACGTGATGGTTAAGCTTGTTGAAAACAACAG    248

BSNT_02735___    249 CACTCACTAG    258
                     |.|.||.||.
BL01198___ymf    249 CTCACATTAA    258


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