Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02738 and BL01195

See Amino acid alignment / Visit BSNT_02738 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence dna-align/BSNT_02738___pgsA.1.5803.seq
#    -bsequence dna-align/BL01195___pgsA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02738___pgsA-BL01195___pgsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02738___pgsA-BL01195___pgsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02738___pgsA
# 2: BL01195___pgsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 591
# Identity:     446/591 (75.5%)
# Similarity:   446/591 (75.5%)
# Gaps:          18/591 ( 3.0%)
# Score: 1656.0
# 
#
#=======================================

BSNT_02738___      1 ATGTTTAACTTACCAAATAAAATCACACTAGCTAGAATCGCATTAATCCC     50
                     ||||||||.|||||.|||||||||||.||..||||||||||||||||.||
BL01195___pgs      1 ATGTTTAATTTACCGAATAAAATCACGCTTTCTAGAATCGCATTAATTCC     50

BSNT_02738___     51 AATCTTCATGATTATCATGCTGGCGCCGTTTGACTGGGGCAGGC------     94
                     ..|.||.|||.|.||||||||.|.|||||||.|.|||||  |||      
BL01195___pgs     51 TGTTTTTATGGTCATCATGCTTGTGCCGTTTCAGTGGGG--GGCTGTCTC     98

BSNT_02738___     95 --TCGAAGTTGGAGACGAATCGATCCCGGTCGCACATTTGGCGGGGGCCA    142
                       |||     |.|| |||.|||||.||||||.|.||||||...||.||..
BL01195___pgs     99 CTTCG-----GCAG-CGAGTCGATTCCGGTCACCCATTTGATCGGCGCAC    142

BSNT_02738___    143 TTCTATTTATTATTGCATCTACAACAGACTGGGTGGACGGGTATTATGCC    192
                     |.||.||||||.|.||.||....||.||.|||||.|||||.||||||||.
BL01195___pgs    143 TGCTGTTTATTTTCGCTTCGGTCACCGATTGGGTTGACGGCTATTATGCA    192

BSNT_02738___    193 CGAAAATTGAATCTCGTAACAAACTTCGGGAAATTTCTTGATCCGCTTGC    242
                     .||||..||||.||.|||||||||||.||||||||.|||||.||||||||
BL01195___pgs    193 AGAAAGCTGAACCTTGTAACAAACTTTGGGAAATTCCTTGACCCGCTTGC    242

BSNT_02738___    243 GGACAAACTGCTGGTATCCGCAGCGTTAATTATCCTTGTTCAATTTGATC    292
                     .|||||.|||||.||.||..|.||.||.|||||.||.||.||.|...|||
BL01195___pgs    243 AGACAAGCTGCTCGTGTCTTCCGCTTTGATTATTCTGGTGCATTACCATC    292

BSNT_02738___    293 TCACTCCAGCTTGGATGGTCATTGTGATTATCAGCAGGGAGTTTGCCGTG    342
                     |..||||.||.|||||||.||||||.|||||||||.||||.||||||||.
BL01195___pgs    293 TTGCTCCGGCCTGGATGGCCATTGTCATTATCAGCCGGGAATTTGCCGTA    342

BSNT_02738___    343 ACAGGTTTAAGGCTTGTCTTAGCCGGAACAGGAGAAGTCGTAGCTGCTAA    392
                     ||.||..|..||||.|||.|.||.|||||.||.||||||||.||.||.||
BL01195___pgs    343 ACGGGACTGCGGCTCGTCCTTGCGGGAACGGGGGAAGTCGTCGCAGCCAA    392

BSNT_02738___    393 CATGCTTGGTAAAATCAAAACCTGGGCACAGATTATTGCGGTATCCGCAT    442
                     |||||||||.|||.|.|||||.|||||.|||||.||.|||.|.||.||..
BL01195___pgs    393 CATGCTTGGAAAAGTGAAAACATGGGCCCAGATCATCGCGATCTCTGCCC    442

BSNT_02738___    443 TGCTTCTTCATAATCTTCCATTTGAACTTGTGTCATTCCCGTT-TGCAGA    491
                     |..|.|||||.|||||.||||||||.|||||.||.|||||||| .||...
BL01195___pgs    443 TTTTGCTTCACAATCTCCCATTTGAGCTTGTATCCTTCCCGTTCGGCTCT    492

BSNT_02738___    492 CTTGGCACTGTGGGTAGCCGTCTTCTTTACTGTCGTCTCAGGCTGGGAAT    541
                     ||| ||..|.|||||.||.|||||.||.||.|||||.||.||||||||.|
BL01195___pgs    493 CTT-GCTTTATGGGTGGCTGTCTTTTTCACAGTCGTATCCGGCTGGGATT    541

BSNT_02738___    542 ATTTCTCTAAAAACTGGGAAGCGTTAAAAACATCTAACTAA    582
                     |||||.|||||||||||||.||.|||||||||||.||||||
BL01195___pgs    542 ATTTCGCTAAAAACTGGGATGCTTTAAAAACATCGAACTAA    582


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