Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02795 and BL01193
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_02795___nrdF.1.5803.seq
# -bsequence dna-align/BL01193___nrdF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02795___nrdF-BL01193___nrdF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02795___nrdF-BL01193___nrdF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02795___nrdF
# 2: BL01193___nrdF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1000
# Identity: 804/1000 (80.4%)
# Similarity: 804/1000 (80.4%)
# Gaps: 32/1000 ( 3.2%)
# Score: 3300.5
#
#
#=======================================
BSNT_02795___ 1 GTGACAAAAATTTATGACGCAGCAAACTGGTCAAAGCATGAAGACGATTT 50
|||||.||||||||.||.||||||||||||||||||||||||||.|||||
BL01193___nrd 1 GTGACGAAAATTTACGATGCAGCAAACTGGTCAAAGCATGAAGATGATTT 50
BSNT_02795___ 51 TACCCAAATGTTCTATAACCAAAACGTGAAACAGTTCTGGCTTCCGGAAG 100
||||||||||||.||.||||||||.||.||.|||||.|||||||||||||
BL01193___nrd 51 TACCCAAATGTTTTACAACCAAAATGTAAAGCAGTTTTGGCTTCCGGAAG 100
BSNT_02795___ 101 AGATTGCTTTAAACGGCGATCTCCTCACATGGAAGTACCTCGGAAAAAAT 150
|||||||..|.||.||.|||||.||.||||||||||||.|.||.||||||
BL01193___nrd 101 AGATTGCGCTTAATGGAGATCTTCTGACATGGAAGTACTTGGGTAAAAAT 150
BSNT_02795___ 151 GAGCAGGACACTTATATGAAGGTACTGGCCGGACTTACGCTTCTTGATAC 200
||.||||||||.||.||||||||.||.||.||.||.||||||||.|||||
BL01193___nrd 151 GAACAGGACACATACATGAAGGTGCTCGCGGGGCTGACGCTTCTCGATAC 200
BSNT_02795___ 201 AGAGCAGGGGAATACGGGGATGCCGATCGTGGCTGAACACGTAGACGGCC 250
||||||||||||.|||||.|||||..|.||.|||||.||.||.||.||.|
BL01193___nrd 201 AGAGCAGGGGAACACGGGAATGCCCCTTGTTGCTGAGCATGTGGAAGGGC 250
BSNT_02795___ 251 ACCAGCGGAAAGCGGTGCTGAACTTTATGGCGATGATGGAGAACGCTGTC 300
|.|||||.||||||||||||||.||.||||||||||||||.|||||.|||
BL01193___nrd 251 ATCAGCGCAAAGCGGTGCTGAATTTCATGGCGATGATGGAAAACGCGGTC 300
BSNT_02795___ 301 CATGCGAAGTCGTACTCTAATATTTTCATGACCCTTGCACCGACTGAAAC 350
||.||.|||||.||.||.||.|||||||||||.||.||.|||||.||.||
BL01193___nrd 301 CACGCCAAGTCCTATTCAAACATTTTCATGACGCTGGCCCCGACAGAGAC 350
BSNT_02795___ 351 GATCAATGAAGTATTTGAATGGGTTAAACAAAATAAATATTTGCAGAAAA 400
||||||.|||||.|||||||||||.||||||||.|||||..|||||||||
BL01193___nrd 351 GATCAACGAAGTCTTTGAATGGGTCAAACAAAACAAATACCTGCAGAAAA 400
BSNT_02795___ 401 AAGCGCAAATGATTGTCGGGCTTTACAAAGCCATTCAAAAAGAT------ 444
||||.||.||.|||||||||||.|| |.||||| ||
BL01193___nrd 401 AAGCTCAGATCATTGTCGGGCTCTA---------TGAAAAA-ATCCGCCA 440
BSNT_02795___ 445 ----GATGAAATTTCACTGTTCAAAGCCATGGTTGCTTCCGTCTATCTGG 490
|||.||||.||.|||||.|||||.|||||.||.|||||.|||.|.|
BL01193___nrd 441 GGGCGATAAAATCTCGCTGTTTAAAGCGATGGTCGCATCCGTTTATTTAG 490
BSNT_02795___ 491 AAAGCTTCCTTTTCTACAGCGGTTTCTATTATCCGTTATATTTCTACGGA 540
||||||||||.|||||||||||.|||||.||.|||.|.|||||.||||||
BL01193___nrd 491 AAAGCTTCCTGTTCTACAGCGGCTTCTACTACCCGCTTTATTTTTACGGA 540
BSNT_02795___ 541 CAAGGAAAACTGATGCAAAGCGGTGAGATCATTAACCTGATCCTTCGTGA 590
||.||.||.||||||||||||||.||.|||||.|||||||||.|.|||||
BL01193___nrd 541 CAGGGCAAGCTGATGCAAAGCGGCGAAATCATCAACCTGATCTTGCGTGA 590
BSNT_02795___ 591 CGAAGCGATTCACGGCGTGTATGTCGGTCTCCTTGCTCAGGAAATTTATA 640
.|||||||||||||||||.||||||||.||.||.||||||||.|||||.|
BL01193___nrd 591 TGAAGCGATTCACGGCGTCTATGTCGGCCTGCTCGCTCAGGAGATTTACA 640
BSNT_02795___ 641 ATAAACAGACAGAAGAGAAAAAAGCAGAGCTTCGTGAATTTGCGATTGAC 690
||.|.|||||....||||||||||.||||||...||.||||.|.|||||.
BL01193___nrd 641 ATCAGCAGACGCCGGAGAAAAAAGAAGAGCTGTATGCATTTTCCATTGAT 690
BSNT_02795___ 691 CTTCTGAATCAGTTATATGAAAATGAGCTTGAGTATACAGAGGACTTGTA 740
||..||||..||.|.|||||||||||||||||.||||||||.|||.||||
BL01193___nrd 691 CTATTGAAAGAGCTTTATGAAAATGAGCTTGAATATACAGAAGACCTGTA 740
BSNT_02795___ 741 CGATCAAGTCGGACTCTCACACGATGTAAAGAAATTCATCCGCTATAATG 790
||||||||||||.||.||||||||.||.|||||.|||||||||||.||||
BL01193___nrd 741 CGATCAAGTCGGCCTTTCACACGACGTGAAGAAGTTCATCCGCTACAATG 790
BSNT_02795___ 791 CGAATAAAGCGCTGATGAATCTTGGATTTGATCCATACTTCGAAGAGGAA 840
|.||.||||||||||||||.|||||.|||||..|.||.||.|||||.|||
BL01193___nrd 791 CCAACAAAGCGCTGATGAACCTTGGCTTTGAAGCTTATTTTGAAGAAGAA 840
BSNT_02795___ 841 GATATTAATCCGATCGTATTAAACGGATTAAACACAAAAACAAAATCGCA 890
||.||.|||||||||||.||.|||||.||.||.||.|||||.||.||.||
BL01193___nrd 841 GAGATCAATCCGATCGTGTTGAACGGGTTGAATACGAAAACGAAGTCACA 890
BSNT_02795___ 891 TGACTTCTTCTCTATGAAGGGGAATGGTTATAAAAAAGCGACAGTTGAGC 940
.|||||||||||.|||||.|||||.||.||.||||||||.||||||||.|
BL01193___nrd 891 CGACTTCTTCTCAATGAAAGGGAACGGCTACAAAAAAGCAACAGTTGAAC 940
BSNT_02795___ 941 CGCTCAAAGATGATGACTTTTATTTTGAAGATGAAAAAGAGCAGATATAA 990
||.|.|||||.||.||||||||.|||||.||| ||| |||
BL01193___nrd 941 CGTTAAAAGACGACGACTTTTACTTTGACGAT----AAG--------TAA 978
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