Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02794 and BL01192
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_02794___nrdE.1.5803.seq
# -bsequence dna-align/BL01192___nrdE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02794___nrdE-BL01192___nrdE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02794___nrdE-BL01192___nrdE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02794___nrdE
# 2: BL01192___nrdE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2113
# Identity: 1678/2113 (79.4%)
# Similarity: 1678/2113 (79.4%)
# Gaps: 20/2113 ( 0.9%)
# Score: 6644.0
#
#
#=======================================
BSNT_02794___ 1 TTGTCACAAAATCAAGTGCCAAAATGGATCCAGTTAAATAACGAAATCAT 50
||||||||||||||||||||||||||||||||||||||.||.||.|||||
BL01192___nrd 1 TTGTCACAAAATCAAGTGCCAAAATGGATCCAGTTAAACAATGAGATCAT 50
BSNT_02794___ 51 GATCCAAAAAGATGGAAAATTCCAGTTTGATAAGGATAAAGAGGCTGTAC 100
||||||||||||.||.|||||||||||||||||.||||||||.|||||||
BL01192___nrd 51 GATCCAAAAAGACGGGAAATTCCAGTTTGATAAAGATAAAGAAGCTGTAC 100
BSNT_02794___ 101 ATAGCTATTTTGTAGATTATATCAATCAAAACACAGTCTTCTTTCACGAT 150
||||.|||||||||||.||||||||.|||||.||.||.||.||.||.|||
BL01192___nrd 101 ATAGTTATTTTGTAGACTATATCAACCAAAATACGGTATTTTTCCATGAT 150
BSNT_02794___ 151 TTAAAAGAGAAGCTGGATTATTTGGTTGAAAATCAA-------TACTACG 193
.|.||||||||..|.|||||.|| |||||| |||||.|
BL01192___nrd 151 CTGAAAGAGAAAATCGATTACTT-------AATCAAGAATGACTACTATG 193
BSNT_02794___ 194 AAGAGGAATTCTTAAGCCTTTATTCTTTTGAAGACATTAAAGAAGTGTT- 242
||||.||.||.|||||||..||..|.||||||||.||.|||||||||||
BL01192___nrd 194 AAGAAGAGTTTTTAAGCCGCTACACGTTTGAAGAAATCAAAGAAGTGTTC 243
BSNT_02794___ 243 TAAGACAGCTTACGCTAAGAAGTTTCGTTTTCCTTCCTTCATGAGTGCGT 292
.|||| .||||||||.||.||.||..|.||.||.|||||.|||||.||.|
BL01192___nrd 244 AAAGA-GGCTTACGCCAAAAAATTCAGATTCCCGTCCTTTATGAGCGCTT 292
BSNT_02794___ 293 TTAAATTCTATAATGACTATGCTTTGAAAACGAATGACAAGAAAAAAATC 342
||||.||.||.|||||.|||||..||||.||.||.||||||||||||||.
BL01192___nrd 293 TTAAGTTTTACAATGATTATGCGCTGAAGACAAACGACAAGAAAAAAATT 342
BSNT_02794___ 343 CTCGAGCGTTATGAGGACCGGATCTCAATTGTTGCGCTGTTCTTCGCTAA 392
||.||.||.|||||.|||.|.|||||.||.||.||..|.||.||.||.||
BL01192___nrd 343 CTTGAACGCTATGAAGACAGAATCTCTATCGTAGCTTTATTTTTTGCAAA 392
BSNT_02794___ 393 CGGCGACACTGAGAAAGCAAAAGAATATGTAAACCTGATGATCAATCAAG 442
|||.||.|..|||||.||.||.||||..||.|...||||||||||.||.|
BL01192___nrd 393 CGGGGATAAGGAGAAGGCGAAGGAATTCGTCAGAATGATGATCAACCAGG 442
BSNT_02794___ 443 AATATCAGCCGAGCACACCGACATTTCTGAACGCCGGCAGAAAACGCCGC 492
|.||||||||||||||.|||||.||..|.||.||||||.|.|||||||||
BL01192___nrd 443 AGTATCAGCCGAGCACGCCGACGTTCTTAAATGCCGGCCGCAAACGCCGC 492
BSNT_02794___ 493 GGTGAACTTGTGAGCTGCTTCTTGCTGGAAGTCAATGATTCCTTAAACGA 542
||.||.||.||.|||||.|||.|..|||||||||||||||||||.|||||
BL01192___nrd 493 GGAGAGCTGGTCAGCTGTTTCCTCTTGGAAGTCAATGATTCCTTGAACGA 542
BSNT_02794___ 543 CATTTCAAGAGCGATCGATATCTCCATGCAGCTTTCTAAACTGGGCGGAG 592
||||||.||||||||.||.||.||.||||||||.||.||.||.|||||||
BL01192___nrd 543 CATTTCGAGAGCGATTGACATTTCGATGCAGCTGTCAAAGCTCGGCGGAG 592
BSNT_02794___ 593 GGGTTTCTCTTAACCTGTCCAAGCTTCGCGCGAAAGGTGAAGCCATTAAA 642
|.||.|||.|.|||||.||.||.||.||.||||||||.|||||.||.|||
BL01192___nrd 593 GCGTATCTTTAAACCTTTCAAAACTGCGTGCGAAAGGCGAAGCGATCAAA 642
BSNT_02794___ 643 GATGTTGAGAATGCGACAAAAGGCGTTGTAGGCGTCATGAAGCTTCTTGA 692
|||||.||.||.|||||||||||.||.||.|||||.||||||||||||||
BL01192___nrd 643 GATGTCGAAAACGCGACAAAAGGTGTCGTCGGCGTGATGAAGCTTCTTGA 692
BSNT_02794___ 693 TAACGCGTTCCGTTACGCTGACCAAATGGGACAAAGACAAGGATCCGGCG 742
.|||||.|||||.|||||||||||||||||.|||||||||||.||.||||
BL01192___nrd 693 CAACGCATTCCGCTACGCTGACCAAATGGGGCAAAGACAAGGCTCAGGCG 742
BSNT_02794___ 743 CGGCGTATTTAAACATTTTCCACCGCGATATCAATGATTTTCTCGATACG 792
|.|||||.||||||||||||||||||||.|||||.|||||.|||||||||
BL01192___nrd 743 CTGCGTACTTAAACATTTTCCACCGCGACATCAACGATTTCCTCGATACG 792
BSNT_02794___ 793 AAAAAGATTTCTGCGGATGAAGATGTGCGTGTCAAAACGCTTTCGATCGG 842
||.||||||||.||.||.||.|||||.||.||.|||||..|.||.|||||
BL01192___nrd 793 AAGAAGATTTCGGCTGACGAGGATGTCCGGGTGAAAACATTGTCCATCGG 842
BSNT_02794___ 843 TGTTGTCATTCCGGATAAGTTCGTTGAGCTTGCACGCGAGGACAAAGCGG 892
.|||||||||||.|||||.|||.|.|||||||||.|.|||||.|||||||
BL01192___nrd 843 GGTTGTCATTCCAGATAAATTCATCGAGCTTGCAAGAGAGGATAAAGCGG 892
BSNT_02794___ 893 CTTATGTATTCTACCCGCACACGATTTATAAAGAGTACGGCCAGCACATG 942
|.||.||.|||||.||||||||..|||||||||.|||||||.|||||.|.
BL01192___nrd 893 CATACGTCTTCTATCCGCACACCGTTTATAAAGCGTACGGCGAGCACCTC 942
BSNT_02794___ 943 GATGAGATGGACATGAACGAAATGTACGACAAATTTGTCGACAACCCTCG 992
||.||.|||||.||||||||.|||||||||....||||.||..|.||.||
BL01192___nrd 943 GACGAAATGGATATGAACGAGATGTACGACCGGCTTGTGGAAGATCCGCG 992
BSNT_02794___ 993 GGTGAAAAAGGAAAAAATCAACCCGCGGAAACTGCTTGAAAAACTGGCGA 1042
.||.|||||.|||||||||.|||||||.||..||||.|||||.||.||||
BL01192___nrd 993 CGTCAAAAAAGAAAAAATCCACCCGCGCAAGATGCTCGAAAAGCTTGCGA 1042
BSNT_02794___ 1043 TGCTTCGTTCTGAATCAGGCTATCCATACATCATGTTCCAAGATAACGTC 1092
||.|..|.||.|||||.||.|||||.|||||.||||||||.||.||||||
BL01192___nrd 1043 TGTTAAGATCGGAATCCGGGTATCCGTACATTATGTTCCAGGACAACGTC 1092
BSNT_02794___ 1093 AATAAAGTGCATGCGAATAACCATATTTCCAAGGTCAAATTTTCTAACCT 1142
||.||.|||||||||||.||.||||||||.||.||.||||||||.|||||
BL01192___nrd 1093 AACAACGTGCATGCGAACAATCATATTTCAAAAGTTAAATTTTCCAACCT 1142
BSNT_02794___ 1143 TTGCTCTGAAGTGCTGCAGGCATCTCAAGTTTCTTCATACACAGACTATG 1192
||||||.||.||.||||||||.||.||||||||.||||||||||||||.|
BL01192___nrd 1143 TTGCTCGGAGGTTCTGCAGGCTTCACAAGTTTCATCATACACAGACTACG 1192
BSNT_02794___ 1193 ATGAAGAAGATGAAATCGGTCTGGATATTTCCTGCAACCTGGGTTCGCTT 1242
.|.||||||||||.|||||.||.||.||.|||||||||||.|||||..|.
BL01192___nrd 1193 GTCAAGAAGATGAGATCGGCCTTGACATCTCCTGCAACCTTGGTTCATTG 1242
BSNT_02794___ 1243 AACATTCTAAATGTCATGGAGCATAAATCAATCGAAAAGACAGTCAAGCT 1292
||||||.|.||.||||||.|..|.|||||..||||..|||||||.|||||
BL01192___nrd 1243 AACATTTTGAACGTCATGAAAAACAAATCGCTCGAGCAGACAGTTAAGCT 1292
BSNT_02794___ 1293 TGCGACAGACTCTTTAACACACGTGTCTGAAACAACTGACATCCGTAATG 1342
|||.||.||.||..|.||.|||||.||||||||.||..||||....||.|
BL01192___nrd 1293 TGCAACCGATTCGCTGACGCACGTTTCTGAAACGACAAACATTACAAACG 1342
BSNT_02794___ 1343 CGCCTGCTGTAAGACGGGCAAACAAAGCGATGAAATCAATCGGCCTCGGT 1392
|.||.|||||.|.|...||.|||||||||||||||||.|||||.|||||.
BL01192___nrd 1343 CACCGGCTGTCAAAAAAGCGAACAAAGCGATGAAATCCATCGGGCTCGGA 1392
BSNT_02794___ 1393 GCTATGAACCTTCACGGCTACCTTGCGCAAAACGGCATTGCGTATGAAAG 1442
||.||||||||.|||||.|.|.|.||.||.|||...||.||.||.|||||
BL01192___nrd 1393 GCGATGAACCTGCACGGATTCTTGGCACAGAACAATATCGCCTACGAAAG 1442
BSNT_02794___ 1443 TCCGGAAGCGCGTGACTTTGCAAACACGTTCTTTATGATGGTGAACTTCT 1492
|..|||||||.|.|||||.||.|||||.||||||||||||.|||||||||
BL01192___nrd 1443 TGAGGAAGCGAGGGACTTCGCGAACACTTTCTTTATGATGATGAACTTCT 1492
BSNT_02794___ 1493 ACTCCATCCAGCGTTCTGCGGAAATCGCAAAAGAGAAGGGTGAAACGTTT 1542
||||.||..|.||.||.||.||||||||.|||||.||.|||||.||||..
BL01192___nrd 1493 ACTCGATTGAACGATCCGCCGAAATCGCCAAAGAAAAAGGTGAGACGTAC 1542
BSNT_02794___ 1543 GATCAATATGAAGGCTCAACCTATGCGACAGGTGAATACTTTGACAAATA 1592
.||...||.|||||.|||.|.||.||.||.|||||||||||.||.||.||
BL01192___nrd 1543 CATGGGTACGAAGGTTCAGCTTACGCAACGGGTGAATACTTCGAAAAGTA 1592
BSNT_02794___ 1593 CGTTTCTAC-TGATTTCTCACCGAAATATGAAAAAATAGCTAATCTGTTT 1641
.|||.| || .||||||||.||.||||..||||||.|.||.||.||.|||
BL01192___nrd 1593 TGTTAC-ACAAGATTTCTCGCCTAAATTCGAAAAAGTGGCCAAGCTTTTT 1641
BSNT_02794___ 1642 GAAGGTATGCATATCCCGACGACAGAGGACTGGAAAAAGCTAAAAGCA-T 1690
|||||.|||||.||||||||.|.|||.||||||||..||||.||| || |
BL01192___nrd 1642 GAAGGCATGCACATCCCGACAAAAGAAGACTGGAAGCAGCTGAAA-CAGT 1690
BSNT_02794___ 1691 TTGTGGCTGAACACGGTATGTATCACAGCTACAGATTATGCATTGCGCCG 1740
||||....||||||||..||||.|||||||||.|..|.|||||.||.|||
BL01192___nrd 1691 TTGTCAAAGAACACGGATTGTACCACAGCTACCGGCTGTGCATCGCACCG 1740
BSNT_02794___ 1741 ACAGGCTCTATCTCATACGTTCAATCAAGTACGGCGTCTGTTATGCCGAT 1790
||.||.||.||.|||||.||.||.|||||.||.||.||.|||||||||||
BL01192___nrd 1741 ACCGGATCCATTTCATATGTACAGTCAAGCACAGCATCGGTTATGCCGAT 1790
BSNT_02794___ 1791 TATGGAACGCATTGAAGAACGAACATACGGCAACTCAAAAACGTACTACC 1840
.|||||.||.|||||||||.||||||||||||||||.||.|||||.||.|
BL01192___nrd 1791 CATGGAGCGGATTGAAGAAAGAACATACGGCAACTCCAAGACGTATTATC 1840
BSNT_02794___ 1841 CAATGCCTGGGCTTGCATCTAATAACTGGTTCTTCTATAAAGAAGCCTAC 1890
||||||||||.|||||..|.|..||||||||||.||||||.|||||.||.
BL01192___nrd 1841 CAATGCCTGGACTTGCGCCGAGCAACTGGTTCTACTATAAGGAAGCGTAT 1890
BSNT_02794___ 1891 GATATGGACATGTTCAAGGTTGTGGATATGATCGCCACTATCCAGCAGCA 1940
||||||||||||||||.||||||.||.||||||.|.||.||.||||||||
BL01192___nrd 1891 GATATGGACATGTTCAGGGTTGTCGACATGATCTCGACGATTCAGCAGCA 1940
BSNT_02794___ 1941 CATTGATCAGGGAATCAGCTTTACATTGTTCTTAAAAGACACAATGACGA 1990
|.||||.||.||.||.|||||||||||||||.|.|||||.||||||||||
BL01192___nrd 1941 CGTTGACCAAGGCATAAGCTTTACATTGTTCCTGAAAGATACAATGACGA 1990
BSNT_02794___ 1991 CCCGTGATTTAAACCGAATCGATCTGTATGCACATCATAGAGGTATTAAA 2040
|.||.|||||.|||||.||||||||.|||||.||.||||.|||.||.|||
BL01192___nrd 1991 CACGCGATTTGAACCGGATCGATCTTTATGCCCACCATAAAGGAATCAAA 2040
BSNT_02794___ 2041 ACCATTTACTATGCAAGAACGAAAGATACTGGGCAAGATAGCTGCCTTTC 2090
||..|||||||||||||||||||.|||||.||||||||..||||||||||
BL01192___nrd 2041 ACACTTTACTATGCAAGAACGAAGGATACAGGGCAAGAAGGCTGCCTTTC 2090
BSNT_02794___ 2091 TTGTGTTGTTTGA 2103
||||||.||||||
BL01192___nrd 2091 TTGTGTCGTTTGA 2103
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