Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01086 and BL01188
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_01086___yeaB.1.5803.seq
# -bsequence dna-align/BL01188___yeaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01086___yeaB-BL01188___yeaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01086___yeaB-BL01188___yeaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01086___yeaB
# 2: BL01188___yeaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 881
# Identity: 640/881 (72.6%)
# Similarity: 640/881 (72.6%)
# Gaps: 16/881 ( 1.8%)
# Score: 2197.0
#
#
#=======================================
BSNT_01086___ 1 ATGGAGAGATATGATGAATTGAAAAAGGGTGAATCCGGGGCGCTGGTCAG 50
|||||..|.|||||||||||.|||||.||||||.|||||||...||||||
BL01188___yea 1 ATGGAACGGTATGATGAATTAAAAAAAGGTGAAACCGGGGCATGGGTCAG 50
BSNT_01086___ 51 CATTGCCGCGTATCTTGTTCTTTCCGCAATTAAACTGATCATCGGTTATC 100
|||...|||.||.|||||.||.||.||..|||||.||..|.|||| .|
BL01188___yea 51 CATCATCGCTTACCTTGTACTGTCGGCTGTTAAATTGGCCGTCGG---GC 97
BSNT_01086___ 101 TT---TTTCACTCGGAAGCACTTACGGCAGACGGGTTAAATAACACAACT 147
|| ||||||||.|||||.||.|..||.|||||..|.||.||.|||||.
BL01188___yea 98 TTGCATTTCACTCCGAAGCCCTCAGAGCCGACGGACTGAACAATACAACC 147
BSNT_01086___ 148 GACATTATTGCTTCTGCTGCTGTGCTGATTGGCCTGCGCATCTCTCAAAA 197
||.|||||.||.||....||.||||||||.|||||..|.||.||.||.||
BL01188___yea 148 GATATTATCGCCTCATTAGCGGTGCTGATCGGCCTCAGGATTTCGCAGAA 197
BSNT_01086___ 198 GCCTCCTGACGAAGATCATCCATACGGCCACTTCCGAGCGGAAACGATTG 247
|||.|||||.|||||.|||||.|||||.||.|||||.||.||.|||||.|
BL01188___yea 198 GCCGCCTGATGAAGACCATCCGTACGGACATTTCCGCGCTGAGACGATCG 247
BSNT_01086___ 248 CATCGCTTATCGCATCGTTTATTATGATGGTTGTCGGACTGCAAGTGCTG 297
|.|||.|.|||||.||.|||||.||||||||.|||||.||..||||||||
BL01188___yea 248 CCTCGATGATCGCTTCATTTATCATGATGGTGGTCGGTCTTGAAGTGCTG 297
BSNT_01086___ 298 TTCAGCGCCGGAGAA--TCTATTTTTTCTGCTAAACAAGAGACGCCGGAT 345
|.||||.|.||.||| .||.|||..|| |.||..||..|||.|||||.
BL01188___yea 298 TACAGCTCGGGCGAAATGCTGTTTAATC--CGAAGGAAACGACACCGGAC 345
BSNT_01086___ 346 ATGATTGCGGCTTGGACGGCAGCGGGCGGGGCAGTCCTGATGCTGATCGT 395
|||||||||||.||||||||.||.|||.|.||.|||.|||||.|..|.||
BL01188___yea 346 ATGATTGCGGCCTGGACGGCTGCAGGCAGCGCCGTCGTGATGTTTTTGGT 395
BSNT_01086___ 396 TTATCGGTACAATAAAAGGCTGGCCAAAAAGGTGAAGAGCCAGGCGCTCC 445
||..|..|||||||||||||||||.|||||||||||.|||||.||.|||.
BL01188___yea 396 TTTCCTCTACAATAAAAGGCTGGCAAAAAAGGTGAACAGCCATGCCCTCT 445
BSNT_01086___ 446 TTGCTGCGGCTGCTGATAATAAATCAGACGCATTGGTCAGTATCGGCACG 495
.|||.||.||.||.||||||||||||||.||.|..|||||.|||||.||.
BL01188___yea 446 ATGCAGCCGCCGCCGATAATAAATCAGATGCCTATGTCAGCATCGGAACA 495
BSNT_01086___ 496 TTTATCGGCATTGTGGCTGCTCAATTCCATCTTGCTTGGATTGATACGGT 545
||....|||||..|.|||.|.|||||..|.|||||.|||.|.|||||||
BL01188___yea 496 TTCGCAGGCATCTTTGCTTCGCAATTTAACCTTGCATGGGTCGATACGG- 544
BSNT_01086___ 546 CA-CTGCGTTTGTGATCGGCCTGCTTATTTGCAAGACCGCATGGGATATT 594
|| |.||||||.|.||.||..|..|.||.|||||.||.||.||||..|||
BL01188___yea 545 CAGCCGCGTTTATCATTGGATTAATCATCTGCAAAACGGCTTGGGGGATT 594
BSNT_01086___ 595 TTTAAAGAATCATCTCACTCTTTGACAGATGGATTCGACACAAAGGACAT 644
||||||||..|..|.||.||.|||||.||.||||||||.|..||..|.||
BL01188___yea 595 TTTAAAGAGGCGGCCCATTCCTTGACGGACGGATTCGATATTAAACATAT 644
BSNT_01086___ 645 TTCCGCTTATAAACAGACAAT-CGAAAAAATCTCCGGTGTGAGCCGTTTA 693
|||..|.||||||.|.||.|| ||.|||..|| ||||.||..||....|.
BL01188___yea 645 TTCAACCTATAAAGAAACGATCCGGAAAGTTC-CCGGCGTCGGCAACATC 693
BSNT_01086___ 694 AAAGACATAAAAGCAAGATACTTGGGCAGTACGGTTCATGTTGATGTGGT 743
|||||..|||||||..|.||.||||||||..|..|.||.||.||..|..|
BL01188___yea 694 AAAGATGTAAAAGCGCGTTATTTGGGCAGCGCCATCCACGTGGAAATTAT 743
BSNT_01086___ 744 GGTTGAGGTATCGGCAGATTTAAATATTACGGAAAGCCACGATATAGCCA 793
.||.||||||..|.|||||.|.||.|||.|.||||||||.||.||.|||.
BL01188___yea 744 CGTGGAGGTAAGGTCAGATCTCAACATTGCAGAAAGCCATGACATCGCCG 793
BSNT_01086___ 794 ATGAAATTGAGCGGAGAATGAAGGAGGAGCATGCGATTGATTATTCGCAT 843
|||||||.|||.|.||||||.||||||||||..||||.|.|.||||.|||
BL01188___yea 794 ATGAAATAGAGAGAAGAATGCAGGAGGAGCACTCGATCGTTCATTCCCAT 843
BSNT_01086___ 844 GTTCATATGGAGCCTT-TAGAACACAAATAA 873
|||||.||.||||||| || ||.|.||||||
BL01188___yea 844 GTTCACATAGAGCCTTCTA-AAGAAAAATAA 873
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