Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02993 and BL01186

See Amino acid alignment / Visit BSNT_02993 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence dna-align/BSNT_02993___parE.1.5803.seq
#    -bsequence dna-align/BL01186___parE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02993___parE-BL01186___parE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02993___parE-BL01186___parE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02993___parE
# 2: BL01186___parE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1981
# Identity:    1586/1981 (80.1%)
# Similarity:  1586/1981 (80.1%)
# Gaps:          26/1981 ( 1.3%)
# Score: 6260.5
# 
#
#=======================================

BSNT_02993___      1 TTGGCTAGAAAACAGCAATTTGATTACAACGAAGATGCCATACAGGTGCT     50
                     ||||.||.||||||||||.||||.||.||.||.|||.|||||||||||||
BL01186___par      1 TTGGTTAAAAAACAGCAAGTTGACTATAATGATGATTCCATACAGGTGCT     50

BSNT_02993___     51 CGAAGGCCTTGAGGCTGTCAGGAAAAGGCCGGGTATGTATATTGGCTCTA    100
                     ||||||||||||.||.|||||.|||.|.||.||||||||.||.||.||.|
BL01186___par     51 CGAAGGCCTTGAAGCGGTCAGAAAACGCCCCGGTATGTACATCGGTTCGA    100

BSNT_02993___    101 CTGAC-GCGCGGGGTTTGCACCACTTGGTTTATGAAATTGTAGATAACTC    149
                     |.||| || |||||..|||||||..|.||.||||||||.||.|||||.||
BL01186___par    101 CAGACAGC-CGGGGACTGCACCATCTCGTATATGAAATCGTCGATAATTC    149

BSNT_02993___    150 TGTCGACGAGGTGCTTGCCGGCCATGGAGATCACATAATCGTCAAAATAC    199
                     .|||||.||.||.|||||.||||||||.||||||||.||.||.|||||||
BL01186___par    150 CGTCGATGAAGTCCTTGCGGGCCATGGGGATCACATTATAGTAAAAATAC    199

BSNT_02993___    200 ATAAAGACAATAGTATTTCTGTACAGGATAGAGGCCGCGGCATGCCGACC    249
                     |||||||.||.||.||.||.||.||.||.||||||||.||.|||||.||.
BL01186___par    200 ATAAAGATAACAGCATATCGGTGCAAGACAGAGGCCGGGGAATGCCAACA    249

BSNT_02993___    250 GGAATGCATAAGCTCGGCAAACCAACCCCTGAAGTGATTTTAACGGTGCT    299
                     ||||||||||||||||||||.||.||.||.|||.|.|||||.||.|||||
BL01186___par    250 GGAATGCATAAGCTCGGCAAGCCGACTCCAGAAATTATTTTGACAGTGCT    299

BSNT_02993___    300 TCATGCCGGAGGAAAATTCGGCCAAGGCGGCTATAAGACAAGCGGCGGGC    349
                     .||||||||||||||.||||||||||||||||||||.||.|||||.||||
BL01186___par    300 GCATGCCGGAGGAAAGTTCGGCCAAGGCGGCTATAAAACGAGCGGGGGGC    349

BSNT_02993___    350 TCCACGGAGTTGGTGCATCAGTCGTGAATGCTTTATCTGAATGGCTGACG    399
                     |.|||||.||.||||||||.||.||.||.||..|.||.||.||||||||.
BL01186___par    350 TGCACGGCGTCGGTGCATCCGTTGTAAACGCCCTGTCCGAGTGGCTGACA    399

BSNT_02993___    400 GTTACCATTGAGCGGGACGGTTTTGTCTATCA-GCAGCGATTTGAAAATG    448
                     ||.||.||||||||||||||...|||.|| || ||||||.||||||||.|
BL01186___par    400 GTCACGATTGAGCGGGACGGAAATGTTTA-CAGGCAGCGTTTTGAAAACG    448

BSNT_02993___    449 GAGGAAAACCGGTTACATCTCTCGAAAAGATTGGCAAAACAAAAAAGACG    498
                     |.||.||||||||.|||||.||.||.||.||.||.|..||.||||||||.
BL01186___par    449 GCGGCAAACCGGTGACATCCCTTGATAAAATCGGAACGACCAAAAAGACC    498

BSNT_02993___    499 GGAACTCTTACACACTTTAAGCCAGATCCAACGATGTTCAGCACAACCAC    548
                     ||.||.||.|..||.||.|||||.|||||..|||||||||||||.||.||
BL01186___par    499 GGCACCCTGATTCATTTCAAGCCTGATCCTGCGATGTTCAGCACGACGAC    548

BSNT_02993___    549 TTATAATTTTGAAACGCTCTCTGAGCGCTTAAGAGAGTCTGCGTTTTTGT    598
                     .|.|||.|||||||||||.||.|||||..|.|||||.||.||.|||||||
BL01186___par    549 GTTTAACTTTGAAACGCTTTCAGAGCGTCTGAGAGAATCAGCCTTTTTGT    598

BSNT_02993___    599 TAAAAGGATTGAAAATTGAGCTGATTGATGAACGCAATGACCAGCATGAG    648
                     ||||||||.|.|||||.||..||||.|||||||||.||  |.|.||..||
BL01186___par    599 TAAAAGGACTAAAAATAGAATTGATCGATGAACGCGAT--CAAACAAAAG    646

BSNT_02993___    649 ----GTCTTTTATTATGAAAACGGCATAGAAGCGTTTGTTGCTTATTTAA    694
                         || ||||| ||.||||||||.||.|||||.|||||.||||||||||
BL01186___par    647 AAACGT-TTTTA-TACGAAAACGGAATCGAAGCTTTTGTCGCTTATTTAA    694

BSNT_02993___    695 ATGAAGAAAAAGACG-TCTTGTCTGAAGTGGTCTCGTTTGAGGGTGAGCA    743
                     ||||.||.||||||| .||| ||||||||||||||.|||||.||.|||||
BL01186___par    695 ATGAGGAGAAAGACGCGCTT-TCTGAAGTGGTCTCATTTGAAGGAGAGCA    743

BSNT_02993___    744 TCATTCTATAGAAGTGGACTTTGCGTTCCAGTTTAACGATGGTTATTCTG    793
                     ..|....||.||.||.|||||.|||||.||||||||.||.||.|||||.|
BL01186___par    744 CAACGGCATCGAGGTTGACTTCGCGTTTCAGTTTAATGACGGCTATTCCG    793

BSNT_02993___    794 AAAATATTTTGTCGTTTGTCAACAATGTCAGAACAAAAGACGGCGGGACA    843
                     ||||.||..|||||||.|||||.|||||||||||.|||||.||.||.||.
BL01186___par    794 AAAACATCCTGTCGTTCGTCAATAATGTCAGAACGAAAGATGGAGGAACC    843

BSNT_02993___    844 CATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGC    893
                     ||||||||.|||||.|||||.|||||||||.|.||.||.||.||.|||||
BL01186___par    844 CATGAGTCCGGTGCCAAAACGGCGATGACGAGAGCATTCAACGAGTATGC    893

BSNT_02993___    894 GCGAAAAGTGG--CTTTGCTGAAAGAAAAGGATAAGAACCTTGAAGGCAC    941
                     |.||||.||||  ||||  |.|||||||||||.||.|||||||||||.||
BL01186___par    894 GAGAAAGGTGGCCCTTT--TAAAAGAAAAGGACAAAAACCTTGAAGGAAC    941

BSNT_02993___    942 CGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTCCGCATACCTGAGG    991
                     .|||||.||||||||.||.||||||||..||||.|||||.||.||.||.|
BL01186___par    942 GGATATCAGGGAAGGCCTGTCAGCCATCGTTTCCGTCCGGATTCCCGAAG    991

BSNT_02993___    992 AGCTTCTTCAATTTGAGGGACAAACAAAAGGAAAGCTCGGTACCAGTGAA   1041
                     ||||||||||||||||.|||||.|||||||||||||||||.||.||||||
BL01186___par    992 AGCTTCTTCAATTTGAAGGACAGACAAAAGGAAAGCTCGGCACAAGTGAA   1041

BSNT_02993___   1042 GCAAGATCAGCGGTGGATGCGATTGTTTCAGAGCAGCTTGCTTACTTTTT   1091
                     |||.|.|||||.||.|||||.||.||.||.||||||||.||.||.|||.|
BL01186___par   1042 GCACGGTCAGCCGTTGATGCAATCGTCTCTGAGCAGCTCGCCTATTTTCT   1091

BSNT_02993___   1092 AGAGGAAAATCGGGACACCGCAACGCTTCTTGTCAAAAAAGCAATCAAGG   1141
                     .||.|||||..||||.||.|||||..|.||||||||||||||.||.||.|
BL01186___par   1092 TGAAGAAAACAGGGAAACGGCAACATTGCTTGTCAAAAAAGCGATTAAAG   1141

BSNT_02993___   1142 CGAGCCAGGCGCGCGAAGCGGCACGCAAAGCCCGTGAAGAAGCAAGAAGC   1191
                     |...|||||||.|.||.||.||..|.|||||..|.|||||.|||||||||
BL01186___par   1142 CCTCCCAGGCGAGAGAGGCTGCGAGAAAAGCAAGAGAAGAGGCAAGAAGC   1191

BSNT_02993___   1192 GGCAAAAAACGAAAAAAATCAGAAGCGACTTTAAGCGGAAAGCTGACGCC   1241
                     ||.||.|||.||||.|||||.||||||||..|...|||.|||||||||||
BL01186___par   1192 GGAAAGAAAAGAAAGAAATCCGAAGCGACGCTCTCCGGGAAGCTGACGCC   1241

BSNT_02993___   1242 TGCGGGTTCAAGAAACCCGGCAAAAAATGAATTGTATCTCGTTGAGGGAG   1291
                     |||....|||||.||.||..|.||.||.||||||||||||||.|||||.|
BL01186___par   1242 TGCACAATCAAGGAATCCATCCAAGAACGAATTGTATCTCGTGGAGGGTG   1291

BSNT_02993___   1292 ATTCAGCAGGCGGGTCAGCCAAGCAGGGACGAGACCGCAGATTCCAGGCG   1341
                     ||||.||.||.||.|||||.|||||||||||||||||.|.|||||||||.
BL01186___par   1292 ATTCTGCGGGAGGATCAGCAAAGCAGGGACGAGACCGGAAATTCCAGGCT   1341

BSNT_02993___   1342 GTTCTGCCTTTACGCGGTAAAGTCATTAATACAGAAAAAGCTAAGCTTGC   1391
                     ||.|||||..|.|||||.|||||.||.|||||.||||||||.|||||.||
BL01186___par   1342 GTCCTGCCGCTCCGCGGAAAAGTTATCAATACGGAAAAAGCGAAGCTGGC   1391

BSNT_02993___   1392 TGATATCTTTAAAAATGAAGAGATCAATACGATCATTCATGCGATCGGCG   1441
                     .|||||.||||||||||||||||||||||||||||||||.||||||||||
BL01186___par   1392 CGATATTTTTAAAAATGAAGAGATCAATACGATCATTCACGCGATCGGCG   1441

BSNT_02993___   1442 GGGGAGTCGGGGCAGATTTCTCA-ATCGATGACATCAACTACGACAAAAT   1490
                     |.||.|||||.||.||||| |.| ||.||.||||||||.|||||||||.|
BL01186___par   1442 GAGGGGTCGGCGCCGATTT-TGACATTGAGGACATCAATTACGACAAAGT   1490

BSNT_02993___   1491 CATCATTATGACCGATGCCGATACTGACGGCGCCCATATTCAAGTGCTGC   1540
                     |||.||.|||||.|||||.|||||.||||||||.|||||.||||||||||
BL01186___par   1491 CATTATCATGACAGATGCGGATACAGACGGCGCGCATATCCAAGTGCTGC   1540

BSNT_02993___   1541 TTCTTACCTTTTTCTATCGCTATATGAAACCGCTCATTGAGCATGGCAAG   1590
                     |.||.||.||||||||.|||||||||||.|||||.||.|||||.||.||.
BL01186___par   1541 TCCTGACTTTTTTCTACCGCTATATGAAGCCGCTGATCGAGCACGGAAAA   1590

BSNT_02993___   1591 GTGTTCATTGCGCTGCCACCTTTATATAAGGTCAGTAAAGGAAG-CGGG-   1638
                     |||||.||.||.|||||.||..|.|||||.||.||.|||||  | |||| 
BL01186___par   1591 GTGTTTATCGCACTGCCGCCGCTCTATAAAGTGAGCAAAGG--GTCGGGC   1638

BSNT_02993___   1639 AAGAAGGAAATCATTGAATATGCATGGTCTGATGAAGAGATGGGTGATGT   1688
                     ||.||.|||||||||||||||||.|||||||||||.||.||||..||.||
BL01186___par   1639 AAAAAAGAAATCATTGAATATGCCTGGTCTGATGAGGAAATGGACGACGT   1688

BSNT_02993___   1689 CCTGAAAAAAGTCGGCAAAGGCTATACCATTCAACGATATAAGGGTCTTG   1738
                     |||.|||||||||||.|||||.|||||.||.||.||.|||||.|||||.|
BL01186___par   1689 CCTCAAAAAAGTCGGAAAAGGATATACGATCCAGCGCTATAAAGGTCTCG   1738

BSNT_02993___   1739 GAGAGATGAACGCAGACCAGTTGTGGGAAACGACGATGAATCCGGAGTCC   1788
                     |.||.||||||||.||||||.|.|||||||||||.|||||.||.|||||.
BL01186___par   1739 GCGAAATGAACGCTGACCAGCTTTGGGAAACGACAATGAACCCCGAGTCA   1788

BSNT_02993___   1789 CGCACACTTGTTAGGGTCAAAATTGACGATGCGGCACGTGTAGAAAGACG   1838
                     .|.||||||||.|||||.|||||.||.||.|||||.||.||.|||.|.||
BL01186___par   1789 AGAACACTTGTCAGGGTTAAAATCGATGACGCGGCCCGGGTGGAACGGCG   1838

BSNT_02993___   1839 TGTGACGACGTTAATGGGAGACAAAGTAGAGCCGCGCAGAAAGTGGATTG   1888
                     .||.|||||.||.|||||.||||||||.||||||.|.|||||.|||||||
BL01186___par   1839 CGTAACGACATTGATGGGCGACAAAGTTGAGCCGAGGAGAAAATGGATTG   1888

BSNT_02993___   1889 AGAAAAACGTCGCTTTTGG-CTTAGATGAAGAAAGCAATATCTTAGAAAA   1937
                     ||||||||||||||||.|| ||| ||||||||||||||.||.||.|||||
BL01186___par   1889 AGAAAAACGTCGCTTTCGGACTT-GATGAAGAAAGCAACATTTTGGAAAA   1937

BSNT_02993___   1938 TGAAAACTTATCGGTCGCTGAGGAGGTTTAA   1968
                     .||.||.||||||||||||||||||||||||
BL01186___par   1938 CGAGAATTTATCGGTCGCTGAGGAGGTTTAA   1968


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