Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05703 and BL01179
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence dna-align/BSNT_05703___ywiC.1.5803.seq
# -bsequence dna-align/BL01179___ywiC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05703___ywiC-BL01179___ywiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05703___ywiC-BL01179___ywiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05703___ywiC
# 2: BL01179___ywiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 771
# Identity: 501/771 (65.0%)
# Similarity: 501/771 (65.0%)
# Gaps: 99/771 (12.8%)
# Score: 1439.0
#
#
#=======================================
BSNT_05703___ 1 ATGAAGGCGCTGATTCCGAAGCAGCACGGGGCGTGGGCGATGCTGCTGAT 50
|||||.|.|.|.||.||||||||||||||.||.|||||||||||..|.||
BL01179___ywi 1 ATGAAAGTGTTCATACCGAAGCAGCACGGCGCCTGGGCGATGCTTGTCAT 50
BSNT_05703___ 51 CCCATTTTTACTCGGCATGGTCAAGGGAGGCCCCGTTATTTGGCATATTC 100
|||.|||.|.|||||||||.||...||||||.|.|.|.|...||||||||
BL01179___ywi 51 CCCGTTTATTCTCGGCATGTTCGCCGGAGGCGCAGATGTAAAGCATATTC 100
BSNT_05703___ 101 CGCTCTTCCTTGGTTGGCTTTTCCTATA-CTTAGCGGTTTATCCCGTTAC 149
||||.|||...||.|||||.||.||||| ||| ||||..|.|||.|.||.
BL01179___ywi 101 CGCTGTTCTGCGGATGGCTGTTTCTATATCTT-GCGGCATCTCCGGCTAT 149
BSNT_05703___ 150 GCT--TGCCTTAAAAAAGAAACAAA--GCAAACCATATCAAAAGTGGATG 195
|.| || .|.||.||||||.|.| |...|| ||||||||.|||.|
BL01179___ywi 150 GATGATG--GTGAAGAAGAAAAATATCGTTTAC--TATCAAAAATGGGT- 194
BSNT_05703___ 196 TGTTAT-TACGGTTTTCCCGCC-------TGCTGCTTTTTGATGATCTCG 237
|.|.|| |||||..||||.||| |.|||||| ||.|||
BL01179___ywi 195 TCTCATCTACGGCATTCCGGCCGTCGTTTTCCTGCTT-------ATTTCG 237
BSNT_05703___ 238 GTCTTTCATAAGCCGCCTCT----CATCTGGGTGGGC----GTTTCTTTA 279
|||.|.|...||||||..|| .||||.|||..|| ||||
BL01179___ywi 238 GTCCTGCTGGAGCCGCAGCTTGTGTATCTCGGTCTGCCGCTGTTT----- 282
BSNT_05703___ 280 CTGCCGCTGTTTCTCATACATATGTATTTTGCCCGCAGAAAAAACGAACG 329
|||||.||||||||..||.|.||||.|||....|||||.|||||..|
BL01179___ywi 283 ---CCGCTCTTTCTCATCAATCTTTATTATGCGAAAAGAAACAACGACAG 329
BSNT_05703___ 330 AGC-CTTATTGAATGATGTTGCAGGTGT-CTTGTTCTTTTGTTCGGGCGG 377
.|| ||| ||.||||||.|.||.|...| |||||| ||..|..|||||||
BL01179___ywi 330 GGCGCTT-TTAAATGATATAGCTGCAATCCTTGTT-TTCAGCACGGGCGG 377
BSNT_05703___ 378 GTTTGCGAGCTGCTGGCTGGG-GATGGGAACCCTTGACGGCTG-GGCTTG 425
|.|||||||||.||||.|||| |..||||| .|||||.|| || |||.|.
BL01179___ywi 378 GCTTGCGAGCTTCTGGATGGGAGCGGGGAA-GCTTGATGG-TGAGGCATC 425
BSNT_05703___ 426 GTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATG 475
||||.||||..|.|||||.|||||.|||||.|..|||||..|.|||||||
BL01179___ywi 426 GTTTGTTTTTATCCAGTCCGCTTTGTTTTTCACAGGGAGCGCTTTTTATG 475
BSNT_05703___ 476 TGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCAT---TT---GCATAC 519
|.||.|||.||||.||.||.|..||||||| || || ||.|
BL01179___ywi 476 TCAAGTCGATGATACGTGAAAAGAAAAACA----ATCGATTCAAGCTT-- 519
BSNT_05703___ 520 TGGTCATGGGGATATCA------CCTGCTGCTCCCCTTTTTATCCGCTCT 563
|..||||||||.||.|| |||||.|.||..||...|..||||
BL01179___ywi 520 TATTCATGGGGCTACCATGTTTTCCTGCCGTTCGTCTCGCTGGCCGC--- 566
BSNT_05703___ 564 TTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAG-CTTGCGG 612
.||.||||||||||||.|..|||...|..|.|||||||| ||| .|.
BL01179___ywi 567 ---AGGGGCAGGATGGGCGGTGATCGGCGTAGTGCCGAGCAGTCTT-AGA 612
BSNT_05703___ 613 GCATGGTTTTTTCATGGAAGG--------GATTGGCCCGTAAAAACGATT 654
||.||||||||.||.||.||| |||| ||.|..||.
BL01179___ywi 613 GCGTGGTTTTTCCACGGGAGGAAACTGTCGATT--------AAGATAATC 654
BSNT_05703___ 655 GGCAT-TCTGGAAATCGTGAATGCCTGCTTCTTTCTTGCCGTCATGTGCC 703
||.|| ||| ||..|.|||||||||||..|||||.|.|||||..||..|.
BL01179___ywi 655 GGAATCTCT-GAGCTGGTGAATGCCTGTATCTTTATGGCCGTGTTGATCG 703
BSNT_05703___ 704 TGTTTAT----CACAAGGTAA 720
|.|||.| || ||.||||
BL01179___ywi 704 TTTTTCTGCTGCA-AACGTAA 723
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