Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05706 and BL01167
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence dna-align/BSNT_05706___fnr.1.5803.seq
# -bsequence dna-align/BL01167___fnr.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05706___fnr-BL01167___fnr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05706___fnr-BL01167___fnr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05706___fnr
# 2: BL01167___fnr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 726
# Identity: 545/726 (75.1%)
# Similarity: 545/726 (75.1%)
# Gaps: 21/726 ( 2.9%)
# Score: 1998.5
#
#
#=======================================
BSNT_05706___ 1 ATGAATTTTCTCTCTGTTCGACCATCTGATAGTGATCTTATTTCCAG-CG 49
|||||..|| ||||||.||..|||.||.|..||| ||..|..||| ||
BL01167___fnr 1 ATGAACATT---TCTGTTAGAAAATCAGACACAGAT-TTGCTCTCAGACG 46
BSNT_05706___ 50 ATCTGCATGAATTGCTGGAATCGATCAGCACGAAAAGAAAAAT--GGAAA 97
||||||||.|.|||||||||||||||||.|||..|.||||||| ||.|.
BL01167___fnr 47 ATCTGCATCACTTGCTGGAATCGATCAGTACGCGACGAAAAATCAGGCAG 96
BSNT_05706___ 98 AACACACGTATT--TGTTTCGGGAAGGAATGGATGCAGAAGAGCTTTATC 145
.|||| ||| |.||||..|||||.|||||||||||.||.||.||||
BL01167___fnr 97 GACAC----ATTCCTTTTTCAAGAAGGGATGGATGCAGAGGAACTGTATC 142
BSNT_05706___ 146 TGATTCAATCAGGACTCATTGAAATCGGCAAGCTGACATCTGACGGAAAA 195
|.|||||.||||||||..|..|.||||||||..||||.||.||.||.|||
BL01167___fnr 143 TTATTCAGTCAGGACTTGTCCAGATCGGCAAATTGACGTCCGATGGCAAA 192
BSNT_05706___ 196 GACCTGACGCTTAGAATCTGCCAAAAGCATGATATCGTCGGAGAATTAAC 245
||.||||||||||||||.|||.||||..|||||||.|||||.||..|.||
BL01167___fnr 193 GAACTGACGCTTAGAATGTGCAAAAAAAATGATATTGTCGGGGAGCTTAC 242
BSNT_05706___ 246 ACTTTTCACTGAAGAACCAAGGTATATGCTCAGTGCAAAAGTGCTAGAGG 295
.|||||.||.|||||..|.|..||||||||.||.|||||..|.||....|
BL01167___fnr 243 GCTTTTTACAGAAGATGCGAAATATATGCTGAGCGCAAAGATCCTCTCTG 292
BSNT_05706___ 296 ATGGCGAGGTGCTCGTCATTAATAAAAATAAGCTGGAAAAAGAATTAATC 345
|||||||.|||.|.|||||.||||||.|||||||.|||||||||.|.||.
BL01167___fnr 293 ATGGCGAAGTGTTGGTCATCAATAAAGATAAGCTTGAAAAAGAACTCATT 342
BSNT_05706___ 346 CAAAACGGCGCTTTGACATTTGAGTTCATGAAATGGATGAGCACGCACCT 395
||||||||.||..||||.||||||||.||||||||||||||||||||..|
BL01167___fnr 343 CAAAACGGTGCGCTGACGTTTGAGTTTATGAAATGGATGAGCACGCATTT 392
BSNT_05706___ 396 CCGGAAGATTCAGTCCAAAATCAGGGATCTGCTTCTTCATGGCAAAAAGG 445
.||.||||||||.||.||.|||.|.||.||..|.||..||||.|||||.|
BL01167___fnr 393 GCGAAAGATTCAATCGAAGATCCGCGACCTTTTGCTGAATGGTAAAAAAG 442
BSNT_05706___ 446 GGGCGCTCTATTCTACCCTTATCCGCTTATCAAACAGCTACGGAGTGGAG 495
|.||||||||.||.|||.|.|||||..|..|||||||||||| |.|.
BL01167___fnr 443 GCGCGCTCTACTCCACCTTGATCCGTCTCGCAAACAGCTACG----GCAT 488
BSNT_05706___ 496 C----GAAGCGACGGCATTCTGATTAACATTGTCCTGACAAATCAGGATT 541
| ||||||||||.|||||.||.||.|||||||||||.||.||||||.
BL01167___fnr 489 CACAAGAAGCGACGGGATTCTCATCAATATTGTCCTGACGAACCAGGATC 538
BSNT_05706___ 542 TGGCAAAGTTTTGTGCGGCTGCACGGGAAAGCATCAACCGTATGCTGGGA 591
||||.||.||||||||.||||||.|.||||||||||||||.||||||.|.
BL01167___fnr 539 TGGCGAAATTTTGTGCTGCTGCAAGAGAAAGCATCAACCGCATGCTGAGC 588
BSNT_05706___ 592 GATCTCCGCAAAAAAGGGGTTATTTCGATAGACGAATCCGGAAAAATTAT 641
||.|||||.||.||.||.||.|||||.||.||.||.||.||||||||..|
BL01167___fnr 589 GACCTCCGGAAGAACGGTGTCATTTCAATTGAGGACTCGGGAAAAATCGT 638
BSNT_05706___ 642 TTTGCACAAGCGGGACTATTTACGATGTGAGATTGAGTGTGAAAATTGCC 691
..|.|||.||....|.||||||..|.|.||.||.||.||||||||.||||
BL01167___fnr 639 CATCCACCAGATCAATTATTTAAAACGCGAAATCGACTGTGAAAACTGCC 688
BSNT_05706___ 692 CGCTGGAGATTTGCAATATTGACTGA 717
||||.||.||.||||||||.||||||
BL01167___fnr 689 CGCTCGAAATCTGCAATATCGACTGA 714
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