Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04054 and BL01159
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence dna-align/BSNT_04054___obgE.1.5803.seq
# -bsequence dna-align/BL01159___obgE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04054___obgE-BL01159___obgE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04054___obgE-BL01159___obgE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04054___obgE
# 2: BL01159___obgE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1300
# Identity: 1017/1300 (78.2%)
# Similarity: 1017/1300 (78.2%)
# Gaps: 26/1300 ( 2.0%)
# Score: 3911.0
#
#
#=======================================
BSNT_04054___ 1 ATGTTTGTAGATCAGGTCAAAGTATATGTAAAAGGCGGCGACGGCGGCAA 50
||||||||.||||||||.|||.||||.|||||||||||.|||||.|||||
BL01159___obg 1 ATGTTTGTTGATCAGGTGAAAATATACGTAAAAGGCGGAGACGGAGGCAA 50
BSNT_04054___ 51 CGGTATGGTTGCGTTTCGCCGTGAAAAATATGTGCCGAAAGGCGGCCCTG 100
||||||||||||.||.|||||.||||||||||||||.|||||.|||||||
BL01159___obg 51 CGGTATGGTTGCTTTCCGCCGCGAAAAATATGTGCCAAAAGGAGGCCCTG 100
BSNT_04054___ 101 CCGGCGGTGACGGAGGAAAGGGAGGAGACGTCGTTTTTGAAGTAGATGAA 150
||||.||||||||.|||||.||.||||||||||||||..||||.||.|||
BL01159___obg 101 CCGGAGGTGACGGCGGAAAAGGCGGAGACGTCGTTTTCAAAGTTGACGAA 150
BSNT_04054___ 151 GGTCTCCGCACCCTGATGGATTTTAGATACAAAAAACACTTTAA---AGC 197
||||||.||||.|||||||||||||||||..|||.|||.||||| |||
BL01159___obg 151 GGTCTCAGCACGCTGATGGATTTTAGATATCAAAGACATTTTAAGGCAGC 200
BSNT_04054___ 198 GATTCGCGGCGAGCATGGCATGTCCAAAAACCAGCACGGACGAAATGCTG 247
| |||||.||.||.||||||||.||||||||||||||.||||||||.|
BL01159___obg 201 G---CGCGGAGAACACGGCATGTCTAAAAACCAGCACGGCCGAAATGCCG 247
BSNT_04054___ 248 ATGATATGGTCATTAAAGTTCCGCCGGGCACCGTTGTGACAGACGATGAT 297
|.||.|||||..|.|||||.|||||.|||||.|||||.|..|||||||||
BL01159___obg 248 AAGACATGGTTGTGAAAGTCCCGCCCGGCACGGTTGTCATTGACGATGAT 297
BSNT_04054___ 298 ACGAAACAGGTCATCGCTGATTTAACAGAGCACGGACAGCGGGCTGTCAT 347
||.|||||||||||||||||||||||.||||||||||||...||.|||||
BL01159___obg 298 ACAAAACAGGTCATCGCTGATTTAACGGAGCACGGACAGGAAGCCGTCAT 347
BSNT_04054___ 348 TGCAAGAGGCGGAAGAGGCGGAAGAGGAAATAGCCGCTTTGCTACACCGG 397
.||||.|||.|||.|.||||||.|.||.||||..||.|||||.||.||.|
BL01159___obg 348 CGCAAAAGGGGGACGCGGCGGACGGGGCAATACACGTTTTGCGACGCCTG 397
BSNT_04054___ 398 CTAATCCCGCGCCTCAGCTTTCAGAAAACGGCGAGCCGGGAAAAGAACGC 447
|.||.||.|||||.||||||||.|||||||||||.||.||.||.||.|||
BL01159___obg 398 CCAACCCGGCGCCGCAGCTTTCTGAAAACGGCGAACCCGGCAAGGAGCGC 447
BSNT_04054___ 448 TACATTGTTCTTGAATTAAAAGTGCTTGCAGATGTCGGACTTGTCGGGTT 497
||.||||||||.||..|.|||||..|.|||||||||||.||||||||.||
BL01159___obg 448 TATATTGTTCTCGAGCTGAAAGTTTTGGCAGATGTCGGTCTTGTCGGCTT 497
BSNT_04054___ 498 CCCGAGTGTGGGAAAATCTACTTTGCTGTCTGTTGTCTCATCTGCAAAAC 547
|||.||.||.||||||||.||..|.||||||||.||.||.||.||.||.|
BL01159___obg 498 CCCAAGCGTCGGAAAATCAACGCTCCTGTCTGTCGTGTCTTCGGCCAAGC 547
BSNT_04054___ 548 CGAAAATTGCGGACTATCACTTTACAACGCTTGTCCCAAATCTCGGCATG 597
||||||||||.||.||.||||||||||||||...|||.||||||||.|||
BL01159___obg 548 CGAAAATTGCCGATTACCACTTTACAACGCTGAACCCGAATCTCGGAATG 597
BSNT_04054___ 598 GTTGAAACGGATGACGGACGCAGCTTTGTCATGGCCGATTTGCCGGGGCT 647
||.||||||||.|||||.|||||||||||.|||||.|||.|.|||||.||
BL01159___obg 598 GTCGAAACGGAAGACGGCCGCAGCTTTGTAATGGCGGATCTTCCGGGACT 647
BSNT_04054___ 648 GATTGAAGGCGCACACCAAGGCGTCGGACTTGGCCACCAGTTTTTGCGCC 697
||||||.||.||.|||.||||.||.||.||.||.|||||.||..|..|.|
BL01159___obg 648 GATTGAGGGGGCGCACGAAGGAGTTGGCCTCGGACACCAATTCCTCAGGC 697
BSNT_04054___ 698 ATATTGAACGGACGAGGGTTATTGTTCATGTCATTGACATGTCAGG-CTT 746
||||.|||.|.|||.|.||.||.||.||.||.|||||||||||.|| |||
BL01159___obg 698 ATATCGAAAGAACGCGCGTCATCGTGCACGTTATTGACATGTCGGGTCTT 747
BSNT_04054___ 747 AGAAGGCCGTGATCCATATGATGATTATCTTACGATTAACCAGGAGC-TG 795
|||||.||.||.||.|||||.||||||.|.||.|||||..|.|||| ||
BL01159___obg 748 -GAAGGGCGCGACCCGTATGAAGATTATGTGACCATTAATAAAGAGCTTG 796
BSNT_04054___ 796 AGCGAGTACAATCTGCGTCTCACTGAGCGTCCGCAAATTATCGTTGCAAA 845
|.| ||||.|||||..|.||.||.||.|||||.||||||||.||.||.||
BL01159___obg 797 AAC-AGTATAATCTCAGGCTGACAGAACGTCCTCAAATTATTGTCGCCAA 845
BSNT_04054___ 846 TAAAATGGACATGCCGGAGGCTGCGGAAAATCTCGAAGCCTTT-AAAGAA 894
|||||||||.||||||||.||.|..|||||||| ||||.|||| ||||||
BL01159___obg 846 TAAAATGGATATGCCGGATGCGGAAGAAAATCT-GAAGGCTTTCAAAGAA 894
BSNT_04054___ 895 AAGCTGACGGATGATTATCCGGTATTCCCGATCAGTGCGGTGACAAGAGA 944
|||||.||.|||||||||||.||.||.||.|||||.||||||||.|||.|
BL01159___obg 895 AAGCTCACAGATGATTATCCTGTTTTTCCAATCAGCGCGGTGACCAGACA 944
BSNT_04054___ 945 AGGTCTGCGTGAGCTTCTGTTTGAGGTTGCCAATCAGCTTGAGAAC-ACA 993
|||..||.|.||.||.||||||||..|||||.| |.|.|||..||| ||.
BL01159___obg 945 AGGCTTGAGGGATCTGCTGTTTGAAATTGCCGA-CCGTTTGGAAACGACG 993
BSNT_04054___ 994 CCGGAATTCCCGCTGTATGACGAGGAAGA----GCTTACACAAAACCGTG 1039
||||||||||||||.||.|||||.||||| ||| .|||||.|.|
BL01159___obg 994 CCGGAATTCCCGCTCTACGACGAAGAAGACATGGCT----GAAAACAGAG 1039
BSNT_04054___ 1040 TCATGTACACGATGGAAAATGAAGAAGTGCCATTTAACATTACACGCGAT 1089
|||||||.|.|.|.||..||||.||||.|||.|||.|.||.|..||.|||
BL01159___obg 1040 TCATGTATAAGCTTGAGGATGAGGAAGCGCCGTTTGAGATCAGCCGTGAT 1089
BSNT_04054___ 1090 CCAGACGGTGTATTTGTGCTTTCA--GGAGACAGCCTTGAGCGGTTATTC 1137
||.|||||....||.|||| ||| ||||.||..|||||.||.|||||.
BL01159___obg 1090 CCTGACGGCACCTTCGTGC--TCAGCGGAGCCAAGCTTGAACGCTTATTT 1137
BSNT_04054___ 1138 AAGATGACTGATTTCTCACGTGATGAATCGGTTAAACGGTTTGCAAGACA 1187
||.|||||.||.||.|||.|.|||||.||.|||||.||.|||||.|||||
BL01159___obg 1138 AAAATGACGGACTTTTCAAGAGATGAGTCTGTTAAGCGTTTTGCCAGACA 1187
BSNT_04054___ 1188 GATGCGCGGAATGGGTGTTGATGAAGCACTCAGAGAACGCGGAGCCAAGG 1237
|.|.|||||||||||.||.|||||.||.||..|.|..|||||.||.||.|
BL01159___obg 1188 GCTTCGCGGAATGGGCGTCGATGATGCGCTTCGGGCCCGCGGTGCAAAAG 1237
BSNT_04054___ 1238 ATGGAGATATAATCAGGCTTCTGGAATTTGAATTTGAATTTATTGATTAA 1287
|.||.||||..|||.|.|||||.||||||||||||||||||||.||.|.|
BL01159___obg 1238 ACGGGGATACGATCCGTCTTCTCGAATTTGAATTTGAATTTATCGACTGA 1287
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