Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04046 and BL01154
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence dna-align/BSNT_04046___nadC.1.5803.seq
# -bsequence dna-align/BL01154___nadC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04046___nadC-BL01154___nadC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04046___nadC-BL01154___nadC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04046___nadC
# 2: BL01154___nadC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 929
# Identity: 574/929 (61.8%)
# Similarity: 574/929 (61.8%)
# Gaps: 148/929 (15.9%)
# Score: 1633.5
#
#
#=======================================
BSNT_04046___ 1 ATGAA-----TCAT--TTACAGCTGAAAAAATTACTGAATCACTTTTTTC 43
|||.| |||| ||| |.||.| |.||.||..|.|||||..
BL01154___nad 1 ATGCAGCGGTTCATACTTA-----GGAACA--TGCTTAAGGAATTTTTCA 43
BSNT_04046___ 44 TTGAGGATATTGGGACAGGGGATCTTACATC-GCAGTCTATTTTTG--GA 90
..||.|||||.||....||||||||.||.|| |.|| |..|||||| ||
BL01154___nad 44 AGGAAGATATCGGCCGGGGGGATCTCACTTCAGAAG-CCGTTTTTGATGA 92
BSNT_04046___ 91 GAA---------CAGAGCTGTGA----AGCGGA-GATTGTTGCAAAGTCA 126
.|| |..||||||.| ||||.| |||
BL01154___nad 93 CAATCATCAATGCGAAGCTGTCATCACAGCGAAGGAT------------- 129
BSNT_04046___ 127 GAGGGTATTTTTGCAGGAG---CAGCGATCATAAAAGAAGGCTTTTCGTT 173
||.||..|.|||||||||| .||.|||..| .|||||||||..|.|
BL01154___nad 130 GACGGCTTGTTTGCAGGAGAATTAGTGATTCT---GGAAGGCTTTCGGCT 176
BSNT_04046___ 174 ATTGGACGAAAATGTTCGAATCATTTTACAC------AAAAAAGATGGGG 217
..|.||.|||| || |||....|.||| ||||.||||||.|
BL01154___nad 177 GCTTGATGAAA-----CG-ATCGCCGTCCACATGCTGAAAACAGATGGCG 220
BSNT_04046___ 218 ACATGTTGCATAAAGGTGAAGTGATTGC-CGAGTTACACGGTCCCGCAGC 266
|...|.|.|.||||||.|||..|||.|| |||.|.| |.||.|..|||||
BL01154___nad 221 AAGCGGTTCGTAAAGGGGAAACGATCGCGCGACTCA-AAGGCCGTGCAGC 269
BSNT_04046___ 267 TGCGCTCCTTTCAGGAGAGCGGGTCGTATTAAATCTTATTCAGAGGCTGT 316
|.|.|||.|..|.||.||.|||||.||..|.|||||.|||||.||..|||
BL01154___nad 270 TTCCCTCATGACCGGTGAACGGGTTGTGCTGAATCTCATTCAAAGAATGT 319
BSNT_04046___ 317 CAGGAATTGCGACAATGACAAGAGAGGCTGTTCGGTGTCTGGATG-ATGA 365
|.||.||.||.|||.|.||| |.||.||.|..|.||.||.|| ||||
BL01154___nad 320 CCGGGATCGCCACATTAACA----AAGCAGTCCATTATCAGGCTGAATGA 365
BSNT_04046___ 366 ACAGATTA---AAATTTGTGACACGAGAAAAACAACACCGGGGCTCAGAA 412
.|.||.|| ..|||||.||.||||||||.||.||.|||||.||..|.|
BL01154___nad 366 TCCGAATATCGCGATTTGCGATACGAGAAAGACGACCCCGGGCCTGCGCA 415
BSNT_04046___ 413 TGCTGGAGAAATATGCTGTCAGAGCCGGCGGCGGGTA-TAATCATCGATT 461
|.||.||.|||||.||.||||.|.||||||| |||.| .|||||.||.||
BL01154___nad 416 TCCTTGAAAAATACGCGGTCAAAACCGGCGG-GGGCAGCAATCACCGCTT 464
BSNT_04046___ 462 CGGTTTGTATGACGGCATCATGATTAAAGATAATCATATCGCAGCATGCG 511
.||.|||.|.|.||||||||||||||||||.||.|||||.||.||.||||
BL01154___nad 465 TGGATTGGACGGCGGCATCATGATTAAAGACAACCATATTGCCGCCTGCG 514
BSNT_04046___ 512 GCTCTATTTTAGAGGC--ATGCAAAAAAGC-CCGTCAGGCCGCAGGGCAC 558
||||.||||.|.|.|| .|| ||||||| |.|||||...|| ||.||.
BL01154___nad 515 GCTCGATTTCAAAAGCGGTTG--AAAAAGCGCGGTCAGCGTGC-GGCCAT 561
BSNT_04046___ 559 ATGGTAAATATCGAGGTGGAAATTGAAACGGAGGGACAGCTGCGGGAAGC 608
|||||.||.|||||.|||||.||.|||.|.||...|.||||.|..|||||
BL01154___nad 562 ATGGTCAAGATCGAAGTGGAGATCGAATCTGAACAAGAGCTTCATGAAGC 611
BSNT_04046___ 609 AATTGCAGCTGGCGCGGATGTTATTATGTTTGACAACTGTCCGCCTGATA 658
.||||..||.|||||.|||.|.||||||||.|||||.||.|||||.||.|
BL01154___nad 612 GATTGAGGCCGGCGCCGATATCATTATGTTCGACAATTGCCCGCCCGAGA 661
BSNT_04046___ 659 CGGTCCG---TCATTT--TGCAAAGCTCACACC-----GGATCATATAAA 698
|||| | .||||| ||.|| |.||||| |.||.||
BL01154___nad 662 CGGT--GAAAGCATTTGCTGAAA---TGACACCCGCCGGCATTAT----- 701
BSNT_04046___ 699 AACTGAAGCCTCCGGCGGGATTACGTTAGAATCTTTGCCTGCTTTTAAAG 748
|||.||.||.||.|||||.|||.|.||.|||..|.|.||.|| |||.||
BL01154___nad 702 AACGGAGGCTTCAGGCGGAATTTCATTTGAAAATCTCCCCGC--TTACAG 749
BSNT_04046___ 749 GG--ACGGGTGTGAATTATATTTCATTAGGATTTCTGACTCATTCCGTCA 796
|| ||.||.|||.|.|.|||||||||.||.|...||||||||||.|..|
BL01154___nad 750 GGGAACAGGGGTGCACTGTATTTCATTGGGCTACTTGACTCATTCGGCGA 799
BSNT_04046___ 797 AAAGTTTAGATATCAGCATGGATGTTACGTTATC-----AAATGAATCTG 841
||||..|.||||||||||||.|||| |.||| ||||.|
BL01154___nad 800 AAAGCCTTGATATCAGCATGAATGT----TGATCTGAAAAAATAA----- 840
BSNT_04046___ 842 TGGAGGAATGCCGTTATGTCAATTCTTGA 870
BL01154___nad 840 ----------------------------- 840
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