Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04039 and BL01150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence dna-align/BSNT_04039___yrbC.1.5803.seq
# -bsequence dna-align/BL01150___yrbC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04039___yrbC-BL01150___yrbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04039___yrbC-BL01150___yrbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04039___yrbC
# 2: BL01150___yrbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity: 528/822 (64.2%)
# Similarity: 528/822 (64.2%)
# Gaps: 138/822 (16.8%)
# Score: 1816.0
#
#
#=======================================
BSNT_04039___ 1 TTGCATCAGCGAACAATTCCCATTAAAGTGTACATAGAAAATGTAAAAGA 50
BL01150___yrb 0 -------------------------------------------------- 0
BSNT_04039___ 51 AGGTGAAAACATGGCAGGCCATTCCAAGTGGAAAAACATTCAAAAAAGAA 100
|||||.||||||||.||.||||||||.|||||.|.|.|||
BL01150___yrb 1 ----------ATGGCTGGCCATTCTAAATGGAAAAATATTCAGAGACGAA 40
BSNT_04039___ 101 AAAATGCACAGGATGCAAAGCGCGGCAAAATATTTATGAAGCTTGCAAAA 150
|||||||.||.|||||.||.|||||||||||.||.|||||||||||.|||
BL01150___yrb 41 AAAATGCCCAAGATGCTAAACGCGGCAAAATTTTCATGAAGCTTGCCAAA 90
BSNT_04039___ 151 GAAATCTATGTGGCAGCGAAAGAAGGCGGAGCGGATCCAGAAGCAAATTC 200
|||||.|||||.||.|||||||||||.|||.|.|||||.|||.|.||..|
BL01150___yrb 91 GAAATATATGTAGCCGCGAAAGAAGGGGGACCAGATCCCGAATCTAACGC 140
BSNT_04039___ 201 AGCATTGCGTCTTGTCATCGAAAAAGCAAAAGGCGCCAATATGCCGAATG 250
|....|||||||.||||||||.|||||.|||...||.||.|||||.||||
BL01150___yrb 141 AAGTCTGCGTCTCGTCATCGATAAAGCCAAAAATGCAAACATGCCAAATG 190
BSNT_04039___ 251 AAAATATAGATCGGGCCATTAAAAAAGCTGCGGGAGGCCAAGATGGAAGC 300
|.||.||.||.||.|||||.|||||||||.|.||..||||.|||||||..
BL01150___yrb 191 ACAACATCGACCGCGCCATCAAAAAAGCTTCCGGCAGCCAGGATGGAAAA 240
BSNT_04039___ 301 AGTTATGAAGAAATCACCTATGAAGGCTACGGCCCTTCAGGGATTGCCGT 350
||.|||||.|||||.||.|||||.||||||||.||....||..|.||.||
BL01150___yrb 241 AGCTATGAGGAAATTACGTATGAGGGCTACGGACCAAGCGGTGTGGCTGT 290
BSNT_04039___ 351 CATGGTTGAATGCGTAACAGATAATAAAAACCGAACGGCGTCAAATGTGC 400
||||||..||||..|.|||||||||||||||||.||||||.|||..||..
BL01150___yrb 291 CATGGTCAAATGTTTGACAGATAATAAAAACCGGACGGCGACAAGCGTCA 340
BSNT_04039___ 401 GGACAGCCTTTAATAAAAATGGCGGAAGTCTGGGAGAAAGCGGATGTGTA 450
|.||.||.||.|..|||||.|||||.||..|||||||||..|||||.||
BL01150___yrb 341 GAACCGCTTTCAGCAAAAACGGCGGCAGCTTGGGAGAAACAGGATGCGT- 389
BSNT_04039___ 451 GCCTTTTTA----TTTGAACGAAAGGGGTTCATTACGATAGACCGTACTG 496
||.||| ||.||.||.||.||.|..|||.|.||.||.|||...|
BL01150___yrb 390 ---TTCTTATATGTTCGACCGGAAAGGATATATTGCAATCGAACGTGAAG 436
BSNT_04039___ 497 AACGGCAAATAGAAGAAGATGAGCTCATGCTTGATGTGCTTGAAGCAGGA 546
|.|...|.|||||.|||||.|||.|.||||||||.||..||||.||.||.
BL01150___yrb 437 ATCTTGAGATAGATGAAGAAGAGTTTATGCTTGAGGTCATTGATGCCGGT 486
BSNT_04039___ 547 GGAGAAGAGCTGCGAATTGAA------GAAAACCTATATGAGGTTTTCAC 590
|..||.|||| ||||| |||.|.||.|..|||.|||..||
BL01150___yrb 487 GCTGAGGAGC------TTGAAACGAGCGAAGAGCTGTTCGAGATTTATAC 530
BSNT_04039___ 591 AGAGCCTGAGCATTTTGAAGAGGTGAA-AACAGC--------CCTCGAAT 631
||||||.||.||.||||||||.||||| ||.||| .|.||..|
BL01150___yrb 531 AGAGCCCGAACAGTTTGAAGAAGTGAAGAAAAGCTTGGAGGAGCGCGGCT 580
BSNT_04039___ 632 -CAA------AATATC--TAATTTCTTCGGCGGAGGTGACCATGCTTCC- 671
||| ||.||| .|||| ||.|||.||||
BL01150___yrb 581 ACAAGCTGGCAACATCCGAAATT---------------ACAATGGTTCCG 615
BSNT_04039___ 672 CAATACCTATGCAGAAGCCGATGA------TCAGG---CTGTTGAGAAGC 712
||| |||||||||||||.|||||| ||||| ..||.||.||||
BL01150___yrb 616 CAA-ACCTATGCAGAAGTCGATGAAGCGCTTCAGGAAAAAGTCGAAAAGC 664
BSNT_04039___ 713 TGGAAACATTAATAGACGTCCTTGAAGATGACGATGATGTTCAAGAAGTG 762
| |||| |||||.|||||||||||.||.|||||.||.||||||
BL01150___yrb 665 T-----CATT----GACGTGCTTGAAGATGATGACGATGTGCAGGAAGTG 705
BSNT_04039___ 763 TATACAAACTATCGCTCATAA- 783
|||||.|| ||.||||.|
BL01150___yrb 706 TATACGAA----CGTTCATTAA 723
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