Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02101 and BL01147

See Amino acid alignment / Visit BSNT_02101 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence dna-align/BSNT_02101___yjoA.1.5803.seq
#    -bsequence dna-align/BL01147.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02101___yjoA-BL01147.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02101___yjoA-BL01147.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02101___yjoA
# 2: BL01147
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 516
# Identity:     308/516 (59.7%)
# Similarity:   308/516 (59.7%)
# Gaps:         102/516 (19.8%)
# Score: 866.5
# 
#
#=======================================

BSNT_02101___      1 ----------ATGAGCCAATCCAATCAAATTG-TCAGCCATTTTTTATCC     39
                               |.||.|..|||          | |||| .|.|||.|.|||
BL01147            1 ATGGAACGGAAAGACCGCATC----------GTTCAG-GAATTTATGTCC     39

BSNT_02101___     40 CATCGAAACGTGACCAATGAGCTTGC---CGAAAAAATCAGCAAAGACCA     86
                     ||.||....|||||..|.||.||  |   |.|||||.|.|..||| |.||
BL01147           40 CACCGCCTTGTGACAGAAGAACT--CATTCAAAAAATTGATGAAA-AACA     86

BSNT_02101___     87 TTACAGCTACAAACCGGCAGAAACATCAATGTCAGCAGAAGAGCTGGTCA    136
                     |..|...|||||||||.|.|||||.||.|||.|||||.|.||.||.||||
BL01147           87 TCTCGATTACAAACCGACTGAAACGTCGATGCCAGCAAAGGAACTTGTCA    136

BSNT_02101___    137 AACACATTCTTACGTCTTTCCA---CTT--GTTC----GCAAATGTCATT    177
                     ..||.||.||....||||||.|   |||  .|||    |||         
BL01147          137 CGCATATGCTGCAATCTTTCTATACCTTTGCTTCGGCGGCA---------    177

BSNT_02101___    178 AAAGAAGGCAATGCCTCACCTTTTCAAAACAAGCAGGAAGAAACAGAAAC    227
                     ||.|||||.||.|.....||||||.||||.||||..||||||||||..||
BL01147          178 AAGGAAGGGAACGGAGAGCCTTTTAAAAAGAAGCCCGAAGAAACAGGGAC    227

BSNT_02101___    228 A-----GATCTCAATGTTCTGGCAAAAACATATACAGAAAAAAC-----G    267
                     |     ||.|     |..||.||.|||||.||||||||||||||     .
BL01147          228 AAGCTTGAGC-----GAGCTTGCCAAAACGTATACAGAAAAAACAAAAAC    272

BSNT_02101___    268 GCCGCT---ATCCTTGAACAGCTGACTGAAGAGCAGCTGGACAGAGAAAT    314
                     ||.|||   ||||||.|    |.|| |||||   |..||||..|.|||.|
BL01147          273 GCTGCTTGAATCCTTTA----CGGA-TGAAG---AATTGGATCGTGAAGT    314

BSNT_02101___    315 TGATCTGACATCCGCTTTCGGCAGAAAAGTCACAGGCCGCG---CGCTGC    361
                     .|||.||||...||..|||||..|||||||   ||.|.|||   .|||.|
BL01147          315 CGATTTGACCGGCGTCTTCGGACGAAAAGT---AGCCGGCGAACAGCTAC    361

BSNT_02101___    362 TTCAGCTTGCAAT-GGAGCATGAAATTCACCATAAAGGCAACCTGTTCGT    410
                     |.|||||.||.|| ||| ||.|||||||||||.||||||||.|||||.||
BL01147          362 TGCAGCTCGCGATCGGA-CACGAAATTCACCACAAAGGCAATCTGTTTGT    410

BSNT_02101___    411 GTATGTGCGGGAAATGGGCCACACTGAGCTTCCTTTCTATCAGCAGCGCA    460
                     .|||||.||.||||||||.|||||.||.||.|||||           |.|
BL01147          411 TTATGTCCGTGAAATGGGACACACGGATCTGCCTTT-----------GTA    449

BSNT_02101___    461 TGTAG-----------    465
                     ||||.           
BL01147          450 TGTAAAGATTCATTGA    465


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