Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04025 and BL01145
See
Amino acid alignment /
Visit
BSNT_04025 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence dna-align/BSNT_04025___bofC.1.5803.seq
# -bsequence dna-align/BL01145___bofC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04025___bofC-BL01145___bofC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04025___bofC-BL01145___bofC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04025___bofC
# 2: BL01145___bofC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity: 337/600 (56.2%)
# Similarity: 337/600 (56.2%)
# Gaps: 165/600 (27.5%)
# Score: 988.5
#
#
#=======================================
BSNT_04025___ 1 --GT------GAAACGA-TTCAGCA-CGGCGTAT--CT---------TTT 29
|| |||.|.| ||||..| |||..||| || |.|
BL01145___bof 1 ATGTACAGCCGAAGCAAGTTCAAAATCGGTTTATTGCTTATTGGAAGTCT 50
BSNT_04025___ 30 GCTGG--GCATTCTTTGCTCAGCGGCAGTATTTTTAATAGGAGCTCCTTC 77
||||| || ||||||| |||.|...||||
BL01145___bof 51 GCTGGCCGC-------GCTCAGC--------TTTCACCTGGAG------- 78
BSNT_04025___ 78 CCGCGCACTTGGCGCGGAAGTGGAGCACTATGAGCCGCTGC--AGGTGCA 125
|| |||||| ||.|| ||||| || |.||.||
BL01145___bof 79 ----GC-CTTGGC-CGAAA-------------AGCCG--GCTAAAGTTCA 107
BSNT_04025___ 126 TGTGCAGCTTGAAAAGGTGTATTTGGACGGCGATGTCAGCATTGAGCATA 175
..|.||||||||||||||.|||.|||||||.||.||..|.||||||.||
BL01145___bof 108 AATCCAGCTTGAAAAGGTTTATCTGGACGGAGACGTTGGAATTGAGAAT- 156
BSNT_04025___ 176 GGCATGAAAAAGTGTTTTCTA----------------TGGATGATTTTTG 209
|||| || ||||.||.|||..
BL01145___bof 157 --------AAAG-------TAGAGGCCGCTCGCACACTGGAAGACTTTAA 191
BSNT_04025___ 210 GGCAGCTTATGCCGGATGGACGCTTGTGGAACAAAAAAAGGGATATGTGC 259
.||.||||||...||.|||..|||..|.||.||.||||||||.|.|.|.|
BL01145___bof 192 AGCTGCTTATAAAGGGTGGCAGCTCATCGATCAGAAAAAGGGGTTTATTC 241
BSNT_04025___ 260 TCTTCCGGAAGCAAATGGACGATATATCTCCGCTCAGCAAGGTCAACGGG 309
|.||.||.||.||..|||||||.||.|||||.||||||||....|||||.
BL01145___bof 242 TGTTTCGCAAACAGGTGGACGACATTTCTCCCCTCAGCAAAACAAACGGT 291
BSNT_04025___ 310 TATATCGGTGTATCGGATAATGGAGTGATTTCTACTTTTCATGGGCGGCC 359
||||||||.||..|.||..||||.||||||||.||||||||.||.||.||
BL01145___bof 292 TATATCGGAGTGACTGAAGATGGCGTGATTTCGACTTTTCACGGTCGCCC 341
BSNT_04025___ 360 TGAGCCAGCT--TCCGAACCAATTCAGTCTTTTTTTCAAATTGATTTAGA 407
.|.||.|| ||.|||||.|||||.||.||||||||.||||||.||.|
BL01145___bof 342 --GGGCATCTTATCAGAACCCATTCAATCGTTTTTTCAGATTGATATAAA 389
BSNT_04025___ 408 AAGGCTGGAAAGCC--AT-----ATGCAAAAAAATCTGCTGAAAGGCATT 450
..|||||||||||| || ||| ||||||..|||||.||.
BL01145___bof 390 GCGGCTGGAAAGCCGGATGGCGGATG-------ATCTGCGCAAAGGGATA 432
BSNT_04025___ 451 CCATTTCGGACAAAAGCGGAGTTTGAGGATGTCA---------------- 484
||||..||.||.|||..|||.|||||..||||||
BL01145___bof 433 CCATACCGCACGAAAAAGGAATTTGAACATGTCATTGAAGCCGTAAAATC 482
BSNT_04025___ 485 --------------------TCGAACATATGAAGACAT-ACAGCGGGTAA 513
|.|||.|||||||||||| |
BL01145___bof 483 ATCCGGAAGCCAACATCATGTAGAAGATATGAAGACATGA---------- 522
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.