Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04020 and BL01141
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_04020___queA.1.5803.seq
# -bsequence dna-align/BL01141___queA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04020___queA-BL01141___queA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04020___queA-BL01141___queA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04020___queA
# 2: BL01141___queA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1044
# Identity: 778/1044 (74.5%)
# Similarity: 778/1044 (74.5%)
# Gaps: 30/1044 ( 2.9%)
# Score: 2769.5
#
#
#=======================================
BSNT_04020___ 1 ATGAAAGTCGATTTATTTGATTTTGAACTACCAGAACGTTTAATTGCACA 50
||||||||.||.|||||.||||||||..|.||.|||||..|.||.|||||
BL01141___que 1 ATGAAAGTAGAATTATTCGATTTTGACTTGCCTGAACGCCTCATCGCACA 50
BSNT_04020___ 51 AGTACCGTTGGAGCAGCGTGATGCTTCAAGGCTGATGGTGCTCGATAAAC 100
.||.||.||..|..||||.|||||.||.||||||||||||||.||||||.
BL01141___que 51 GGTTCCTTTAAAAGAGCGGGATGCGTCCAGGCTGATGGTGCTGGATAAAA 100
BSNT_04020___ 101 ATACAGGAGAGCTTACTGACAGCTCGTTTAAACACATTATCAGCTTCT-T 149
|.|||||.|||.|.|||.|||||.|||||||.|||.|.|| .|.||.| |
BL01141___que 101 AAACAGGGGAGATCACTCACAGCACGTTTAAGCACGTGAT-TGATTTTCT 149
BSNT_04020___ 150 TAACGAAGGCGATTGTCTAGTCCTGAACAATACCCGGGTACTGCCTGCGC 199
.||||..||||||||..|.||.||||||.||||..||||.|||||.||.|
BL01141___que 150 GAACGCGGGCGATTGCATCGTTCTGAACGATACGAGGGTGCTGCCGGCCC 199
BSNT_04020___ 200 GGTTATTCGGCA--CAA--AAGAGGATACCGGCGCGAAAGTGGAACTTCT 245
|.||.|.||| | ||| ||||| ||.||.||.||.||.|||.||||
BL01141___que 200 GCTTGTACGG-AGTCAAGGAAGAG---ACGGGAGCAAAGGTTGAAGTTCT 245
BSNT_04020___ 246 TTTGTTGAAACAGGA--AACCGGTGATAAATGGGAAACACTTGCCAAACC 293
|.||||.|||||||| || ||.||....||||||||.||||.|||.||
BL01141___que 246 TCTGTTAAAACAGGAGGAA--GGGGACGTCTGGGAAACGCTTGTCAAGCC 293
BSNT_04020___ 294 GGCGAAACGGGTGAAAAAAGGAACTGTTGTCACATTTGGAGACGGAAGAT 343
.||.||.|||||.||....|||||||||.|..|.||.||.|||||..|..
BL01141___que 294 CGCAAAGCGGGTCAAGCGCGGAACTGTTCTTTCGTTCGGTGACGGCCGTC 343
BSNT_04020___ 344 TGAAGGCAATCTGCACGGAAGAGCTTGAGCACGGCGGCAGAAAGATGGAA 393
|.|.|||..|||||||.||||||||.|||||||||||||||||.||.|||
BL01141___que 344 TAACGGCGGTCTGCACAGAAGAGCTCGAGCACGGCGGCAGAAAAATTGAA 393
BSNT_04020___ 394 TTTCAATATGACGGTATTTTCTACGAGGTGCTTGAATCCCTTGGAGAGAT 443
||.|..|||||.||.|||||.|||||||||||.||.||.||.||.||.||
BL01141___que 394 TTCCGCTATGAAGGGATTTTTTACGAGGTGCTCGAGTCGCTCGGTGAAAT 443
BSNT_04020___ 444 GCCGCTCCCTCCATATATCAAAGAACAGCTTGATGACAAAGAGCGCTACC 493
|||.||.|||||.|||||.|||||||||||.|||||||..||||||||.|
BL01141___que 444 GCCTCTGCCTCCTTATATTAAAGAACAGCTCGATGACAGGGAGCGCTATC 493
BSNT_04020___ 494 AGACAGTGTATTCAAAAGAAATC--GGCTCTGCTGCTGCGCCTACAGCTG 541
||||.||.||.|| ||||||| | ||.||.||.||||||||.||.||.|
BL01141___que 494 AGACGGTTTACTC-AAAGAAA-CAAGGATCGGCGGCTGCGCCGACGGCCG 541
BSNT_04020___ 542 GCCTTCACTTCACGGAAGA-AATCTTACAGCAGCTGAAAGACAAAGGCGT 590
|.||.||.||.|||||||| |.|||....|| |||.|..||.||||||||
BL01141___que 542 GGCTGCATTTTACGGAAGAGATTCTCGATGC-GCTCAGGGAAAAAGGCGT 590
BSNT_04020___ 591 GCAAATTGAGTTCATCACACTGCACGTAGGCCTTGGAACGTTTCGCCCTG 640
|||.||||.|||.|||||.||.||.||.||.|||||.||.||.||.||||
BL01141___que 591 GCATATTGCGTTTATCACCCTTCATGTCGGTCTTGGGACATTCCGGCCTG 640
BSNT_04020___ 641 TGAGTGCCGATGAAGTGGAAGAGCATAATATGCATGCAGAGTTTTATCAA 690
|.|||||.||..|.||.||.||.||..|.||||||||.|||||||||.||
BL01141___que 641 TCAGTGCGGAAAATGTAGAGGAACACGACATGCATGCCGAGTTTTATGAA 690
BSNT_04020___ 691 ATGTCAGAAGAAACGGCTGCAGCCTTAAACAAAGTAAGAGAAAATGGCGG 740
|||||.|||||||||||.|||...||||||...||.|||.|..|.|||||
BL01141___que 691 ATGTCGGAAGAAACGGCAGCATTGTTAAACCGCGTCAGACAGGAAGGCGG 740
BSNT_04020___ 741 TCGGATCATTTCTGTCGGCACGACCTCGACACGCACGCTTGAGACGATTG 790
..||||||||||.|||||||||||.|||||..|.|||||||||||.||.|
BL01141___que 741 AAGGATCATTTCCGTCGGCACGACATCGACGAGAACGCTTGAGACAATCG 790
BSNT_04020___ 791 CCGGGGAACATGACGGGCAATTTAAAGCATCAAGCGGCTGGACATCTATT 840
|....||.||||||||.|..||....|.|.|.||||||||||||||.|||
BL01141___que 791 CTTCCGAGCATGACGGCCGCTTCCGGGAAGCGAGCGGCTGGACATCGATT 840
BSNT_04020___ 841 TTTATTTATCCGGGCTATGAATTTAAAGCCATTGACGGAATGATTACAAA 890
|||||.|||||.|||||...|||....||.||.|||||.||||||||.||
BL01141___que 841 TTTATCTATCCCGGCTACACATTCCGGGCAATAGACGGGATGATTACCAA 890
BSNT_04020___ 891 CTTCCATTTGCCGAAATCGTCATTGATTATGCTGGTCAGCGCGCTTGCTG 940
.||.|||.|.|||||||||||..|.||||||||.|||||||||||.||.|
BL01141___que 891 TTTTCATCTTCCGAAATCGTCCCTCATTATGCTTGTCAGCGCGCTCGCAG 940
BSNT_04020___ 941 GAAGAGAAAACATTCTGCGT---GCCTA--TAACCATGCAGTGGAAGAGG 985
|.|||||..| |.|||.| ||||| ..||| |||||||||.|.|
BL01141___que 941 GCAGAGAGCA---TGTGCTTTCCGCCTACCGGACC--GCAGTGGAACACG 985
BSNT_04020___ 986 AATACCGTTTCTTCAGCTTCGGAGACGCGATGCTGATTATATAA 1029
|||||||.|||||||||||.||||||||.|||.||||.|.||||
BL01141___que 986 AATACCGCTTCTTCAGCTTTGGAGACGCCATGTTGATCAAATAA 1029
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