Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04019 and BL01140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_04019___tgt.1.5803.seq
# -bsequence dna-align/BL01140___tgt.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04019___tgt-BL01140___tgt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04019___tgt-BL01140___tgt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04019___tgt
# 2: BL01140___tgt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1159
# Identity: 916/1159 (79.0%)
# Similarity: 916/1159 (79.0%)
# Gaps: 26/1159 ( 2.2%)
# Score: 3652.5
#
#
#=======================================
BSNT_04019___ 1 --GTGGCTGAACAACCAATACGCTATGAATTTATAAAAGAATGCAAACAA 48
||.|| |.|||||.|||||||||||.||.|||||||.|||.||||||
BL01140___tgt 1 TTGTCGC--AGCAACCGATACGCTATGAGTTCATAAAAGCATGTAAACAA 48
BSNT_04019___ 49 ACAGGAGCGCGGCTGGGCAAAGTGCATACGCCTCACGGCTCCTTCGAAAC 98
||||||||..|||||||.|.||||||.||.||.||||||||.||.|||||
BL01140___tgt 49 ACAGGAGCAAGGCTGGGGAGAGTGCACACCCCGCACGGCTCTTTTGAAAC 98
BSNT_04019___ 99 GCCGGTTTTTATGCCGGTCGGCACACTGGCGACAGTCAAAACAATGTCGC 148
||||||.||||||||.||.||.||.||.||.||.||.|||||.|||||||
BL01140___tgt 99 GCCGGTGTTTATGCCCGTAGGAACGCTCGCCACCGTTAAAACGATGTCGC 148
BSNT_04019___ 149 CTGAAGAGCTGAAAGCAATGGATGCAGGCATCATTTTGAGCAACACTTAT 198
|.|||||||||||||.|||||.|||||.|||.|||||.|||||.||.||.
BL01140___tgt 149 CGGAAGAGCTGAAAGAAATGGGTGCAGACATTATTTTAAGCAATACGTAC 198
BSNT_04019___ 199 CATCTATGGCTTCGTCCGGGCCAAGACATTGTCAAAGAAGCGGGCGGGCT 248
||.||.|||||..|.||||||||.|||||.||||||||.|||||.|||||
BL01140___tgt 199 CACCTTTGGCTGAGACCGGGCCATGACATCGTCAAAGAGGCGGGGGGGCT 248
BSNT_04019___ 249 CCATAAATTTATGAACTGGGACCGCGCAATTTTAACAGATTCAGGCGGTT 298
.|||.|.||||||||.|||.|||||||.||.||.||.|||||||||||.|
BL01140___tgt 249 TCATCAGTTTATGAATTGGAACCGCGCCATCTTGACGGATTCAGGCGGCT 298
BSNT_04019___ 299 TTCAGGTCTTTTCTTTAAGCAAGTTTCGTAATATAGAGGAAGAGGGTGTC 348
|||||||.|||||..|.|||.||||.||.||.||.||.||.||.||.||.
BL01140___tgt 299 TTCAGGTGTTTTCCCTGAGCGAGTTCCGCAAAATCGAAGAGGAAGGCGTT 348
BSNT_04019___ 349 CATTTCCGCAATCATCTAAATGGAGACAAGCTGTTTTTATCTCCGGAAAA 398
|||||||||||||||.||||.|||||||||||||||||||||||.|||||
BL01140___tgt 349 CATTTCCGCAATCATTTAAACGGAGACAAGCTGTTTTTATCTCCTGAAAA 398
BSNT_04019___ 399 AGCGATGGAGATCCAAAACGCACTCGGCTCTGATATTATGATGGCGTTTG 448
|||||||||.|||||||||||.||||||||.|||||||||||||||||||
BL01140___tgt 399 AGCGATGGAAATCCAAAACGCCCTCGGCTCGGATATTATGATGGCGTTTG 448
BSNT_04019___ 449 ACGAATGCCCACCATACCCGGCGGAGTACGACTACATGAAGAGGTCAGTT 498
||||||||||.|||||||||||.||||||||.||.|||||||.|||.|||
BL01140___tgt 449 ACGAATGCCCGCCATACCCGGCAGAGTACGATTATATGAAGAAGTCTGTT 498
BSNT_04019___ 499 GAACGGACAAGCCGTTGGGCGGAACGCTGCCTGAATGCCCACAATCGTCA 548
|||||.||.|||||.|||||||||.|.||||||||.||.||||||||.|.
BL01140___tgt 499 GAACGCACGAGCCGCTGGGCGGAAAGGTGCCTGAAAGCTCACAATCGCCC 548
BSNT_04019___ 549 GGATGAACAAGGGCTGTTTGGTATTGTACAAGGCGGAGAATATGAAGATC 598
.||.||.||.|||||.||.||.||.||.||||||||.||.||.|||.||.
BL01140___tgt 549 TGACGAGCAGGGGCTTTTCGGAATCGTTCAAGGCGGCGAGTACGAAAATT 598
BSNT_04019___ 599 TGCGGACACAAAGTGCGAAGGACTTGATTTCGCTTGATTTTCCCGGATAT 648
||.|.|.||||||||||||.|||||||||||..|.|||||.||.||||||
BL01140___tgt 599 TGAGAAAACAAAGTGCGAAAGACTTGATTTCATTGGATTTCCCGGGATAT 648
BSNT_04019___ 649 GCTATAGGCGGATTGTCTGTTGGTGAACCGAAGGATGTCATGAATCGTGT 698
||||||||.|||.|.||.||.||.||.||.||.||.||.|||||.|||||
BL01140___tgt 649 GCTATAGGTGGACTATCCGTCGGAGAGCCAAAAGACGTGATGAACCGTGT 698
BSNT_04019___ 699 ACTCGAATTTACAACACCGCT-CTTGCCGAAGGATAAACCGAGATATCTG 747
.||.||.||||||||.||||| ||| ||...||||||||||.|.||..|.
BL01140___tgt 699 GCTGGAGTTTACAACTCCGCTGCTT-CCAGCGGATAAACCGCGCTACTTA 747
BSNT_04019___ 748 ATGGGAGTAGGTTCTCCGGACGCACTGATCGACGGAGCGATCCGCGGGGT 797
|||||.||.|||||.||||||.|||||||.||||||||.||||||||.||
BL01140___tgt 748 ATGGGTGTCGGTTCACCGGACTCACTGATTGACGGAGCCATCCGCGGAGT 797
BSNT_04019___ 798 CGATATGTTTGACTGTGTGCTGCCTACACGGATTGCAAGAAACGGCACAG 847
.||||||||.||.||.||||||||.|||.||||.||.||||||||.||
BL01140___tgt 798 GGATATGTTCGATTGCGTGCTGCCGACAAGGATAGCGAGAAACGGTAC-- 845
BSNT_04019___ 848 TGTTTACTGCT----------GAAGGACGACTCAATATGAAAAATGCGAA 887
||| |||||.||.|||....|.||||||||.||
BL01140___tgt 846 --------GCTCATGACGAGCGAAGGGCGCCTCGTCGTCAAAAATGCAAA 887
BSNT_04019___ 888 ATTTGAAAGAGACTTCCGTCCGATTGATGAAGAGTGTGATTGCTATACAT 937
||.|||||||||.|||.|.|||||||||||..||||.||.||||||||.|
BL01140___tgt 888 ATATGAAAGAGATTTCAGGCCGATTGATGAGCAGTGCGACTGCTATACGT 937
BSNT_04019___ 938 GTAAAAACTACACTCGCGCGTACATTAGGCACTTGATTCGCTGCAATGAA 987
|....||.|||.|.|||||.||.||.||.||.||.||.||||||||.|||
BL01140___tgt 938 GCCGCAATTACTCGCGCGCTTATATCAGACATTTAATCCGCTGCAACGAA 987
BSNT_04019___ 988 ACATTCGGCCTTCGATTAACAACTTACCATAACCTTCATTTTCTGTTACA 1037
||.||.||..||||.|||||..||||.|||||.|||.|||||||||||.|
BL01140___tgt 988 ACGTTTGGAATTCGTTTAACTTCTTATCATAATCTTTATTTTCTGTTAAA 1037
BSNT_04019___ 1038 CTTAATGGAGCAGGTAAGACAGGCTATTCGCGAGGATCGTCTGGGTGATT 1087
.|||||||.|||.||.|||.|.||.|||||.||.||||||.|.|||||||
BL01140___tgt 1038 ATTAATGGGGCAAGTGAGAGATGCCATTCGTGAAGATCGTTTAGGTGATT 1087
BSNT_04019___ 1088 TCAGAGAAGAGTTCTTTGAGCGTTACGGCTATAACAAGCCAAATGCGAAA 1137
||.|.||||||||.||||||||.|||||.|.|||.||.||||||||.|||
BL01140___tgt 1088 TCCGGGAAGAGTTTTTTGAGCGCTACGGTTTTAATAAACCAAATGCTAAA 1137
BSNT_04019___ 1138 AGCTTCTAA 1146
||.||||.|
BL01140___tgt 1138 AGTTTCTGA 1146
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