Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04015 and BL01138
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_04015___yrbG.1.5803.seq
# -bsequence dna-align/BL01138___yrbG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04015___yrbG-BL01138___yrbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04015___yrbG-BL01138___yrbG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04015___yrbG
# 2: BL01138___yrbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 689
# Identity: 446/689 (64.7%)
# Similarity: 446/689 (64.7%)
# Gaps: 70/689 (10.2%)
# Score: 1332.0
#
#
#=======================================
BSNT_04015___ 1 ATGGAAGAGCTTCTCA-CTATTGCGTTTCGCACAGTCGTATTGTATTTTG 49
|||||.|| ..|||.| ||.||.|||||||.||..||||.||||||||..
BL01138___yrb 1 ATGGATGA-AATCTTAGCTCTTACGTTTCGGACGATCGTTTTGTATTTCA 49
BSNT_04015___ 50 TGATATTGGTCATTTTTCGTTTCATGGGCAAACGGGAGATCGGAGAGCTT 99
|.||.||..|..|.|||||.||.|||||.||..||||.||.||.|||||.
BL01138___yrb 50 TCATCTTTATTTTGTTTCGCTTGATGGGGAAGAGGGAAATAGGCGAGCTG 99
BSNT_04015___ 100 AGTATTTTAGATCTCGTTGTCTTTATCATGATGGCTGAAATTGCCGTTTT 149
||.||..|.|||||.||.||.||||||||||||||.|||||.||.|||||
BL01138___yrb 100 AGCATACTGGATCTTGTCGTTTTTATCATGATGGCCGAAATCGCGGTTTT 149
BSNT_04015___ 150 AGCCATAGAAAACGTAGACGATCATCTATTTCATACCATTTTGCCAATGC 199
.||.||.|||||..|.||.||.||.||..|.|||||.||..|.||.||.|
BL01138___yrb 150 GGCTATTGAAAATCTCGATGACCACCTTCTCCATACGATCATCCCGATTC 199
BSNT_04015___ 200 TTGTATTAATGATCATTCAAGTGACTTTGGCATACTTTTCTTTAAAAAAC 249
|.||.||.|.|.|.||.||.||.|..||.|||||..|.||.||.|||||.
BL01138___yrb 200 TCGTTTTGACGCTGATCCAGGTTATATTTGCATATCTGTCATTGAAAAAT 249
BSNT_04015___ 250 CGAAAAGTCCGCCAGCTTCTTGACGGTAAGCCGACCATAATTATCAAATA 299
|.||||.||||||.||||||.||.||.||.||||| .|||||||.|.|
BL01138___yrb 250 CAAAAAATCCGCCGGCTTCTCGATGGAAAACCGAC---GATTATCATAGA 296
BSNT_04015___ 300 ---TGGAAAAATTGACGAAGAAGCCATGAAATCACAGCGATATAATTTTG 346
.|||||||||||.|||.|.|||||||...|||||||.|||||||..|
BL01138___yrb 297 CCGCGGAAAAATTGATGAACACGCCATGAGGACACAGCGCTATAATTACG 346
BSNT_04015___ 347 ATGATTTAATGGTTCAACTCAGAGAAAATAGCGTCGACAGAGTAGCTGAC 396
|||||||.|||...||.||.|||||.||.|..||.||..||.|.|..||.
BL01138___yrb 347 ATGATTTGATGACGCAGCTGAGAGATAAGAATGTGGAACGAATCGGGGAT 396
BSNT_04015___ 397 GTATCATTTGCCATATTAGAGCCGTCGGGCAAACTGACTATTGT-----A 441
||.||||.|||.||.||.||||||.|.||.||.||..| |.||| |
BL01138___yrb 397 GTTTCATATGCGATTTTGGAGCCGACCGGGAAGCTTTC-AGTGTTTACAA 445
BSNT_04015___ 442 AAGA-------AAGAAAATAGCGGAGAGCATCGGCAGCTCGAAATGCCGC 484
|||| ||.||||| |.|||||.|||||.
BL01138___yrb 446 AAGACGGGCCGAACAAAAT-----------------GATCGAACTGCCGT 478
BSNT_04015___ 485 TCATTATAGACGGCTTCATTCAAACAGAAAACCTGTCCAGA----ATCAG 530
|.|||.|.|||||..|..||||.|.||||.|..|| || |||.|
BL01138___yrb 479 TGATTGTTGACGGAGTTGTTCAGAAAGAAGAATTG----GAAAAGATCGG 524
BSNT_04015___ 531 TAAAGATAAAAAATGGCTGCTTG----AAAGTTTGCAAAAACACGGATAC 576
.||.|||.||.|.|| ||||| ||||.|||.|||||.| |||.||
BL01138___yrb 525 GAAGGATCAAGAGTG---GCTTGAGCAAAAGCTTGAAAAAAGA-GGACAC 570
BSNT_04015___ 577 ACAAACCCTTCAGATATTTCATTTTGCTCGTTTACAGACGGAGAA----- 621
....|.|.|||..|.|||||.|.||||.| ||||| |.||
BL01138___yrb 571 CGCGATCTTTCCAAAATTTCTTATTGCAC--TTACA-----ATAAAGGTT 613
BSNT_04015___ 622 --TTATTTATTGACGAAAAAGATGGGTAC-CGCACGTGA 657
||.|||||||||..|||.||||..|.| .|| |.|.|
BL01138___yrb 614 CTTTTTTTATTGACATAAAGGATGAATTCAAGC-CTTAA 651
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