Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04015 and BL01138

See Amino acid alignment / Visit BSNT_04015 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:04
# Commandline: needle
#    -asequence dna-align/BSNT_04015___yrbG.1.5803.seq
#    -bsequence dna-align/BL01138___yrbG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04015___yrbG-BL01138___yrbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04015___yrbG-BL01138___yrbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04015___yrbG
# 2: BL01138___yrbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 689
# Identity:     446/689 (64.7%)
# Similarity:   446/689 (64.7%)
# Gaps:          70/689 (10.2%)
# Score: 1332.0
# 
#
#=======================================

BSNT_04015___      1 ATGGAAGAGCTTCTCA-CTATTGCGTTTCGCACAGTCGTATTGTATTTTG     49
                     |||||.|| ..|||.| ||.||.|||||||.||..||||.||||||||..
BL01138___yrb      1 ATGGATGA-AATCTTAGCTCTTACGTTTCGGACGATCGTTTTGTATTTCA     49

BSNT_04015___     50 TGATATTGGTCATTTTTCGTTTCATGGGCAAACGGGAGATCGGAGAGCTT     99
                     |.||.||..|..|.|||||.||.|||||.||..||||.||.||.|||||.
BL01138___yrb     50 TCATCTTTATTTTGTTTCGCTTGATGGGGAAGAGGGAAATAGGCGAGCTG     99

BSNT_04015___    100 AGTATTTTAGATCTCGTTGTCTTTATCATGATGGCTGAAATTGCCGTTTT    149
                     ||.||..|.|||||.||.||.||||||||||||||.|||||.||.|||||
BL01138___yrb    100 AGCATACTGGATCTTGTCGTTTTTATCATGATGGCCGAAATCGCGGTTTT    149

BSNT_04015___    150 AGCCATAGAAAACGTAGACGATCATCTATTTCATACCATTTTGCCAATGC    199
                     .||.||.|||||..|.||.||.||.||..|.|||||.||..|.||.||.|
BL01138___yrb    150 GGCTATTGAAAATCTCGATGACCACCTTCTCCATACGATCATCCCGATTC    199

BSNT_04015___    200 TTGTATTAATGATCATTCAAGTGACTTTGGCATACTTTTCTTTAAAAAAC    249
                     |.||.||.|.|.|.||.||.||.|..||.|||||..|.||.||.|||||.
BL01138___yrb    200 TCGTTTTGACGCTGATCCAGGTTATATTTGCATATCTGTCATTGAAAAAT    249

BSNT_04015___    250 CGAAAAGTCCGCCAGCTTCTTGACGGTAAGCCGACCATAATTATCAAATA    299
                     |.||||.||||||.||||||.||.||.||.|||||   .|||||||.|.|
BL01138___yrb    250 CAAAAAATCCGCCGGCTTCTCGATGGAAAACCGAC---GATTATCATAGA    296

BSNT_04015___    300 ---TGGAAAAATTGACGAAGAAGCCATGAAATCACAGCGATATAATTTTG    346
                        .|||||||||||.|||.|.|||||||...|||||||.|||||||..|
BL01138___yrb    297 CCGCGGAAAAATTGATGAACACGCCATGAGGACACAGCGCTATAATTACG    346

BSNT_04015___    347 ATGATTTAATGGTTCAACTCAGAGAAAATAGCGTCGACAGAGTAGCTGAC    396
                     |||||||.|||...||.||.|||||.||.|..||.||..||.|.|..||.
BL01138___yrb    347 ATGATTTGATGACGCAGCTGAGAGATAAGAATGTGGAACGAATCGGGGAT    396

BSNT_04015___    397 GTATCATTTGCCATATTAGAGCCGTCGGGCAAACTGACTATTGT-----A    441
                     ||.||||.|||.||.||.||||||.|.||.||.||..| |.|||     |
BL01138___yrb    397 GTTTCATATGCGATTTTGGAGCCGACCGGGAAGCTTTC-AGTGTTTACAA    445

BSNT_04015___    442 AAGA-------AAGAAAATAGCGGAGAGCATCGGCAGCTCGAAATGCCGC    484
                     ||||       ||.|||||                 |.|||||.|||||.
BL01138___yrb    446 AAGACGGGCCGAACAAAAT-----------------GATCGAACTGCCGT    478

BSNT_04015___    485 TCATTATAGACGGCTTCATTCAAACAGAAAACCTGTCCAGA----ATCAG    530
                     |.|||.|.|||||..|..||||.|.||||.|..||    ||    |||.|
BL01138___yrb    479 TGATTGTTGACGGAGTTGTTCAGAAAGAAGAATTG----GAAAAGATCGG    524

BSNT_04015___    531 TAAAGATAAAAAATGGCTGCTTG----AAAGTTTGCAAAAACACGGATAC    576
                     .||.|||.||.|.||   |||||    ||||.|||.|||||.| |||.||
BL01138___yrb    525 GAAGGATCAAGAGTG---GCTTGAGCAAAAGCTTGAAAAAAGA-GGACAC    570

BSNT_04015___    577 ACAAACCCTTCAGATATTTCATTTTGCTCGTTTACAGACGGAGAA-----    621
                     ....|.|.|||..|.|||||.|.||||.|  |||||     |.||     
BL01138___yrb    571 CGCGATCTTTCCAAAATTTCTTATTGCAC--TTACA-----ATAAAGGTT    613

BSNT_04015___    622 --TTATTTATTGACGAAAAAGATGGGTAC-CGCACGTGA    657
                       ||.|||||||||..|||.||||..|.| .|| |.|.|
BL01138___yrb    614 CTTTTTTTATTGACATAAAGGATGAATTCAAGC-CTTAA    651


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