Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04017 and BL01134
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_04017.1.5803.seq
# -bsequence dna-align/BL01134___yrzE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04017-BL01134___yrzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04017-BL01134___yrzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04017
# 2: BL01134___yrzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 252/437 (57.7%)
# Similarity: 252/437 (57.7%)
# Gaps: 100/437 (22.9%)
# Score: 727.5
#
#
#=======================================
BSNT_04017 1 ATGGAGGAAACGAAACAAGTTGGAAAAGGCATTCTTTACGGCTTAATCGC 50
|||.|.|||.|.||||||||.||.|||||.|||.|.|||.||||..|.|.
BL01134___yrz 1 ATGAACGAACCAAAACAAGTCGGCAAAGGGATTTTATACAGCTTGGTGGT 50
BSNT_04017 51 CATATTTTC------------------AGCC-----------ATGCTCCT 71
| |||||| |||| .|||||||
BL01134___yrz 51 C--ATTTTCGCTTTGATGTTTGCAGGAAGCCTGCTTATTTCGCTGCTCCT 98
BSNT_04017 72 GACAAGTTTGGCGGTTTCACTTTTATTGACCGCAACCTCGCTGGAAGAAT 121
.|| .||||| .|.|||.||| |||.
BL01134___yrz 99 TAC-----------CTTCAC-ATCATTAACC---------------GAAA 121
BSNT_04017 122 CATCATTTAACTGGCTGATCACAGCTATCTCATTTCTCTCTTTATTTATC 171
..|||||.|.||||.||||.||.||.||.||.|||.|..|.||.||.|||
BL01134___yrz 122 GTTCATTCAGCTGGTTGATTACCGCCATATCTTTTATTACCTTGTTCATC 171
BSNT_04017 172 GGCGGGTTCATTTCAGGCGGGAAAGGCAAGGAAAGAGGCTGGATGATTGG 221
|||||.||.|||.|.||.||.|||...|||||||..||.|||.|||..||
BL01134___yrz 172 GGCGGTTTTATTGCGGGAGGAAAATCGAAGGAAAAGGGGTGGCTGAGCGG 221
BSNT_04017 222 AGCATTGACTGCCATAAGTTT---TTCTCTGATTATCTTA--------TT 260
||..|||||.|| |.|| ||||| .|||| ||
BL01134___yrz 222 AGGGTTGACAGC-----GCTTTGCTTCTC------CCTTACGGTGCTTTT 260
BSNT_04017 261 GTTTCAGTATTTAGGATTCGGAAAGAC-----ATTTACAGCAGAA-CAGC 304
||||||.|||.|.||.||.|||.||.| |||| ||| ||||
BL01134___yrz 261 GTTTCAATATCTCGGCTTTGGAGAGGCCTTCAATTT------GAAGCAGC 304
BSNT_04017 305 TGATCTTCCATCTGGGATTTTTAGGGGTGTGCATGCTGGGCGGGATTTTC 354
|..|||..|||...||.|||||.||.||..||||||||||||||.|||||
BL01134___yrz 305 TCCTCTATCATTCCGGCTTTTTGGGAGTCAGCATGCTGGGCGGGGTTTTC 354
BSNT_04017 355 GGCGTGAACATG-AGGGGAAACAGGTCTTCCACATAA 390
||.||.||..|| ||||||..|..| |||||
BL01134___yrz 355 GGGGTCAATCTGCAGGGGAGCCGTG-------CATAA 384
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