Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04011 and BL01131
See
Amino acid alignment /
Visit
BSNT_04011 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_04011___secDF.1.5803.seq
# -bsequence dna-align/BL01131___secDF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04011___secDF-BL01131___secDF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04011___secDF-BL01131___secDF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04011___secDF
# 2: BL01131___secDF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2277
# Identity: 1695/2277 (74.4%)
# Similarity: 1695/2277 (74.4%)
# Gaps: 114/2277 ( 5.0%)
# Score: 6175.5
#
#
#=======================================
BSNT_04011___ 1 ATGAAAAAAGGACGCTTGATTGCGTTTTTCCTTTTCGTTCTATTGATCGG 50
|||||||||||||||||||||||||||||||||..||||||.||||||||
BL01131___sec 1 ATGAAAAAAGGACGCTTGATTGCGTTTTTCCTTACCGTTCTCTTGATCGG 50
BSNT_04011___ 51 CACGGGCTTGGGCTACTTTACGAAGCCTGCCGCTAACAATATTACGTTAG 100
.||.||..||||....||.||||||||.||.||..||||.||.|...|.|
BL01131___sec 51 TACAGGACTGGGAATGTTCACGAAGCCGGCTGCAGACAACATCAGCCTCG 100
BSNT_04011___ 101 GATTGGATTTGCAAGGCGGATTTGAGGTGCTGTATGATGTACAGCCTGTA 150
|..|.|||.|.||.|||||.||||||||.||||||||.||.|||||||..
BL01131___sec 101 GCCTTGATCTTCAGGGCGGTTTTGAGGTTCTGTATGAAGTCCAGCCTGCC 150
BSNT_04011___ 151 AAAAAAGGTGACAAAA-TCACAAAAGACGTTCTGGTCAGCACAGTAGAGG 199
|||.|.||.||||||| |.|| |..||.|..||..|||||||.||.||.|
BL01131___sec 151 AAACAGGGCGACAAAATTGAC-AGGGATGCCCTCATCAGCACGGTTGAAG 199
BSNT_04011___ 200 CATTGAACCGCCGGGCCAATGTTCTCGGTGTCAGCGAACCGAACATCCAA 249
|..|||||||||||||.|||||..|.||.||||||||.||||||||.|||
BL01131___sec 200 CGCTGAACCGCCGGGCGAATGTATTAGGCGTCAGCGAGCCGAACATTCAA 249
BSNT_04011___ 250 ATTGAAGGGAATAACCGGATTCGCGTTCAGCTCGCTGGTGT-GACAAACC 298
||||||||.||.||||||||..|.||||||||.||.||.|| ||| ||||
BL01131___sec 250 ATTGAAGGAAACAACCGGATCAGGGTTCAGCTTGCCGGCGTCGAC-AACC 298
BSNT_04011___ 299 AAAACAGAGCGCGTGAAATTCTGGCGACTGAAGCGCAGCTTTCTTTCAGA 348
|.|||||.|||||.|||||..|..||||..|.||.||.|||.|.|||||.
BL01131___sec 299 AGAACAGGGCGCGGGAAATCTTATCGACACAGGCTCAACTTACGTTCAGG 348
BSNT_04011___ 349 GATACGAATGACAAAGAATTGCTGAATGGCTCTGACCTCGTCGAAAACGG 398
|||||||||||||||||..|..||||.||..|.||.||.|||||||||||
BL01131___sec 349 GATACGAATGACAAAGAGCTTTTGAACGGTGCGGATCTTGTCGAAAACGG 398
BSNT_04011___ 399 AGCTAAACAAACGT------ATGATGCCAAAACAAATGAACCGATTGTCA 442
.||.|||||..||| |.||| ||.|||||.|||||.||.|
BL01131___sec 399 CGCCAAACAGTCGTTCAAGCAGGAT------ACGAATGAGCCGATCGTGA 442
BSNT_04011___ 443 GCATTAAACTGAAAGATGCTGATAAATTCGGCGAAGTGACCAAAAAGGTC 492
..||.||.|||||.|||||.||||||||||||||||||||.||.||.||.
BL01131___sec 443 CGATCAAGCTGAAGGATGCCGATAAATTCGGCGAAGTGACGAAGAAAGTG 492
BSNT_04011___ 493 ATGAAAATGGCGCCAAACAACCAGCTTGTTATTTGGATGGATTACGAAAA 542
.|..|.|||..|||.|||||||||||.||.||.|||.|.||||||.||||
BL01131___sec 493 CTCGATATGAAGCCGAACAACCAGCTCGTCATCTGGCTTGATTACAAAAA 542
BSNT_04011___ 543 AGGGGACTCATTTAAAAAAGAGGTTCAAAAAGAGCACCCTAAATATGTAT 592
|||.|||||.||||||||.||....|||||||.|.|.|.||||||..|.|
BL01131___sec 543 AGGCGACTCTTTTAAAAAGGAATCGCAAAAAGCGGATCATAAATACATTT 592
BSNT_04011___ 593 CCGCCCCAAATGTAAGTAAGGAATTAAACACAACTGACGTTACAATTGAA 642
||||.||.|||||.||..|||...|.||.||..|.|||||.|..||||||
BL01131___sec 593 CCGCTCCGAATGTCAGCCAGGTGCTGAATACGTCAGACGTGATGATTGAA 642
BSNT_04011___ 643 GGGCAA-TTTACGGTTCAAGAAGCAAAAGATTTAGCCAGCATTTTAAACG 691
||||| ||||||.||||.|||||||||||..|.||.|||||||||||.|
BL01131___sec 643 -GGCAACTTTACGATTCAGGAAGCAAAAGACATGGCGAGCATTTTAAATG 691
BSNT_04011___ 692 CAGGCGCACTTCCTGTGAAACTGACTGAAAAGTATTCGACATCAGTAGGC 741
|.||.||.||||||||.|||||...||||||||||||||||||.||.||.
BL01131___sec 692 CGGGAGCTCTTCCTGTCAAACTCGTTGAAAAGTATTCGACATCCGTCGGA 741
BSNT_04011___ 742 GCACAATTCGGCCAGCAGGCTCTCCATGATACGGTGTTTGCCGGTATTGT 791
||.||.||.||..||||||||.|..|||||||.||||||||.||.||..|
BL01131___sec 742 GCGCAGTTTGGGGAGCAGGCTTTGAATGATACCGTGTTTGCGGGAATCAT 791
BSNT_04011___ 792 CGGTATTGCAATTATTTTCTTATTTATGCTTTTCTATTACCGTCTGCCGG 841
.||||||||.|||||||||||||||||||||.|.||.||.||..||||.|
BL01131___sec 792 TGGTATTGCTATTATTTTCTTATTTATGCTTCTTTACTATCGCTTGCCTG 841
BSNT_04011___ 842 GATTAATCGCGGTGATTACGCTATCTGTTTATATCTACATTACACTCCAG 891
|.||.||.|||||.||||||||.||.||.||.||||||||||||||.|||
BL01131___sec 842 GTTTTATTGCGGTCATTACGCTTTCGGTCTACATCTACATTACACTGCAG 891
BSNT_04011___ 892 ATCTTTGACTGGATGAATGCCGTACTCACGCTTCCGGGAATTGCCGCTCT 941
||.||.||||||||||||||.||.||.||.||||||||.||.||.|||||
BL01131___sec 892 ATATTCGACTGGATGAATGCGGTTCTGACCCTTCCGGGGATCGCGGCTCT 941
BSNT_04011___ 942 CATTTTAGGTGTCGGGATGGCTGTTGACGCCAACATTATTACCTATGAGC 991
.||.||.||.|||||||||||.||||||||||||||.|||||.|||||.|
BL01131___sec 942 TATATTGGGCGTCGGGATGGCGGTTGACGCCAACATCATTACGTATGAAC 991
BSNT_04011___ 992 GGATTAAAGAAGAGCTCAAGCTAGGAAAGTCAGTCCGCTCTGCCTTCCGT 1041
|.||.|||||||||||.|||||.||.||.||.|||||.||.||.| |
BL01131___sec 992 GCATAAAAGAAGAGCTGAAGCTCGGCAAATCGGTCCGTTCGGCTT----T 1037
BSNT_04011___ 1042 T----CAGGAAACAGACGGTCATTTGCGACGATTTTTGACGCGAATATTA 1087
| |||||||||||.|.||.|||||.|||||||||||.||.|||||||
BL01131___sec 1038 TAAAGCAGGAAACAGAAGATCGTTTGCAACGATTTTTGATGCCAATATTA 1087
BSNT_04011___ 1088 CAACCATTATTGCAGCGG--TTGTGCTCTTTATCTTTGGGACAAGCTCTG 1135
|.||.||..|||| ||| |.|||||.||.||.|||||.||||||||||
BL01131___sec 1088 CGACGATGCTTGC--CGGAATCGTGCTTTTCATATTTGGTACAAGCTCTG 1135
BSNT_04011___ 1136 TTAAAGGGTTTGCGACAATGCTGATCCTATCGATTTTGACAAGCTTTATC 1185
|.|||||.||.|||||.||||||||||||||.|||||||||||||||||.
BL01131___sec 1136 TCAAAGGCTTCGCGACCATGCTGATCCTATCCATTTTGACAAGCTTTATT 1185
BSNT_04011___ 1186 ACTGCCGTTTTCTTATCGAGATTTCTCCTCGCTCTCCTTGTGGAAAGCAG 1235
||.||.||.|||.|.|||.|.||.||.||||..||.||.||.||||||.|
BL01131___sec 1186 ACAGCTGTCTTCCTGTCGCGCTTCCTGCTCGGCCTGCTGGTCGAAAGCCG 1235
BSNT_04011___ 1236 ATGGCTTGATCGGAAAAAAGGCTGGTTTGGTGT---CAATAAGAAACATA 1282
.||||||||.||||||||||||||||||||.|| ||| ||.|.||||.
BL01131___sec 1236 CTGGCTTGACCGGAAAAAAGGCTGGTTTGGGGTGCGCAA-AAAAGACATT 1284
BSNT_04011___ 1283 TCATGGATATTCAG-GATACGGATGAAAATACAGAGCCGCATACGCC--A 1329
| |||||| |||| .|.||.||.||||||||.|||||.|..|..|| .
BL01131___sec 1285 T--TGGATA-TCAGAAAGACAGACGAAAATACGGAGCCTCCGAACCCGTT 1331
BSNT_04011___ 1330 TTCCAAAAATGGGATTTC-ACGAGCAAACGCAAATACTTCTTT--ATTTT 1376
|||| |||||||||||| .|| |.||.|||||||..|||||| |||||
BL01131___sec 1332 TTCC--AAATGGGATTTCGTCG-GGAAGCGCAAATGGTTCTTTGCATTTT 1378
BSNT_04011___ 1377 CTCCAGTGCAGTCACGGTT------GCCGGGATTATTATCCTGCTTGTGT 1420
| |.||..|| || ||.||..||||..||.|||||||||
BL01131___sec 1379 C----GGGCGTTC----TTCTGGCCGCTGGTCTTATCGTCTTGCTTGTGT 1420
BSNT_04011___ 1421 TCAGGCTGAATCTTGGCATTGACTTTGCTAGCGGTGCACGGATTGAAGTG 1470
|.|.||||||.||.|||||.||.||..|.|||||..|..|.||.|||||.
BL01131___sec 1421 TTAAGCTGAACCTCGGCATCGATTTCTCAAGCGGATCGAGAATCGAAGTT 1470
BSNT_04011___ 1471 CAAAGCGACCATAAGCTGACAACAGAGCAAGTTGAGAAGGATTTTGAA-- 1518
||||||||.||||||||||||||..||||..|.||.|||||.||||||
BL01131___sec 1471 CAAAGCGATCATAAGCTGACAACCCAGCAGCTCGAAAAGGACTTTGAACA 1520
BSNT_04011___ 1519 --TCTCTGGGTATGGACCCTGATACTGTAGTTCTGTCAGGCGAAAAGAGC 1566
|| ||..|.||.|||||..|..|.|||||.||||||||||| .
BL01131___sec 1521 AGTC----GGGCTTGATCCTGACTCGATCGTTCTTTCAGGCGAAAA---A 1563
BSNT_04011___ 1567 AAT-ATC--GGTGTTGCCCGTTTTGTCGGGGTGC-----CAGATAAAGAA 1608
||| ||| ||.||.|||.|.||||||||.|||| ||||.||||
BL01131___sec 1564 AATGATCATGGCGTCGCCAGGTTTGTCGGCGTGCCGAATCAGAAAAAG-- 1611
BSNT_04011___ 1609 ACCATAGCAAAAGTAAAAACGTATTTTAAAGACAAATACGGATCAGAGCC 1658
||.||..||||.|||...|||||||||||||||||||||...||.||
BL01131___sec 1612 ---ATCGCTGAAGTGAAAGATTATTTTAAAGACAAATACGGAAGCGAACC 1658
BSNT_04011___ 1659 AAATGTCAGCACAGTTTCACCGACAGTCGGTAAGGAGCTGGCAAGAAATG 1708
||||||||||||.||.||.||.||.|||||.|||||||||||.|||||||
BL01131___sec 1659 AAATGTCAGCACCGTATCGCCTACCGTCGGCAAGGAGCTGGCGAGAAATG 1708
BSNT_04011___ 1709 CGCTGTACGCAGTTGCT-ATAGCTTCTATTGGCATCATTATTTACGTTTC 1757
||||.||.|| |.||.| ||.||.||.||.||.||||||.|.||.||.||
BL01131___sec 1709 CGCTTTATGC-GGTGATCATCGCGTCAATCGGGATCATTTTGTATGTCTC 1757
BSNT_04011___ 1758 AATCCGATTCGAATACAAAATGGCGATTGCTGCCATCGCCTCATTGCTAT 1807
.|||||.||.||||||||.|||||||||||.||.||..|.||||||||.|
BL01131___sec 1758 GATCCGCTTTGAATACAAGATGGCGATTGCGGCTATTACTTCATTGCTGT 1807
BSNT_04011___ 1808 ATGACGCATTCTTTATCGTCACGTTCTTCAGTATTACAAGGCTTGAGGTA 1857
|||||||.||.||.|||.|..|..|||||||..|.||||||||||||||.
BL01131___sec 1808 ATGACGCGTTTTTCATCATTGCCGTCTTCAGCCTGACAAGGCTTGAGGTT 1857
BSNT_04011___ 1858 GATGTTACGTTCATCGCGGCCATCTTGACGATAATCGGGTATTCCATTAA 1907
||||||||.|||||.||.|||.|..|||||||.|||||.|||||.||.||
BL01131___sec 1858 GATGTTACTTTCATTGCTGCCGTGCTGACGATCATCGGCTATTCGATAAA 1907
BSNT_04011___ 1908 CGATACAATCGTTACATTTGACAGGGTCCGCGAGCATATGAAAAAGCGCA 1957
.||||||||.||.||.|||||||||.||.|.|||||||||||||||||||
BL01131___sec 1908 TGATACAATTGTAACGTTTGACAGGATCAGGGAGCATATGAAAAAGCGCA 1957
BSNT_04011___ 1958 AGCCGAAAACATTTGCCGATCTGAACCATATTGTAAACCTGAGCCTGCAG 2007
|.||||||||.||...|||..||...||||||||.||..|||||.|||||
BL01131___sec 1958 AACCGAAAACCTTCAGCGACTTGTCGCATATTGTGAATTTGAGCTTGCAG 2007
BSNT_04011___ 2008 CAAACCTTTACACGTTCAATTAACACTGTATTAACTGTTGTGATTGTTGT 2057
||.||.||.||.|||||.|||||.||.||..|.|||||.||.|||||.||
BL01131___sec 2008 CAGACGTTCACGCGTTCGATTAATACGGTGCTGACTGTCGTCATTGTCGT 2057
BSNT_04011___ 2058 TGTGACATTG-----CTGATCTTTGGAGCATCTTCTATTACTAACTTCTC 2102
||||| ||.|||||.||.||..|.||.|||.|.||||||||
BL01131___sec 2058 -----CATTGCACTTCTCATCTTCGGCGCTGCATCGATTTCGAACTTCTC 2102
BSNT_04011___ 2103 AATTGCTTTATTGGTCGGGCTGTTAACAGGCGTTTATTCTTCTCTATACA 2152
..||||..|.||||||||.||.||.|..||.||.|||||.||.||.||||
BL01131___sec 2103 TGTTGCGCTGTTGGTCGGACTTTTGAGCGGAGTATATTCATCACTCTACA 2152
BSNT_04011___ 2153 TTGCCGCACAAATTTGGCTTGCATGGAAAGGAAGAGAACTGAAAAA--AG 2200
|.||.||.|||.|.|||||||..||||||||..|.||||||||||| .|
BL01131___sec 2153 TCGCAGCTCAACTATGGCTTGTCTGGAAAGGGCGCGAACTGAAAAAGCCG 2202
BSNT_04011___ 2201 ATTCGGCGC-------------AATAA 2214
| .|||| |||||
BL01131___sec 2203 A---AGCGCAAGCCTGCAGAAGAATAA 2226
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.