Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04006 and BL01126

See Amino acid alignment / Visit BSNT_04006 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:03
# Commandline: needle
#    -asequence dna-align/BSNT_04006___apt.1.5803.seq
#    -bsequence dna-align/BL01126___apt.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04006___apt-BL01126___apt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04006___apt-BL01126___apt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04006___apt
# 2: BL01126___apt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 516
# Identity:     415/516 (80.4%)
# Similarity:   415/516 (80.4%)
# Gaps:           6/516 ( 1.2%)
# Score: 1654.0
# 
#
#=======================================

BSNT_04006___      1 ATGGATTTAAAACAATACGTAACAATTGTACCGGATTACCCGAAAGAGGG     50
                     ||||||||.||..|.||.||.||||||||.||||||||||||||.||.||
BL01126___apt      1 ATGGATTTGAAGAAGTATGTGACAATTGTGCCGGATTACCCGAAGGAAGG     50

BSNT_04006___     51 CGTGCAATTTAAAGATATTACGACACTGATGGATAAAGGCGATGTATACC    100
                     |||.|||||||||||||||||.|||.|||||||.||||||||.||.||.|
BL01126___apt     51 CGTACAATTTAAAGATATTACAACATTGATGGACAAAGGCGACGTCTATC    100

BSNT_04006___    101 GCTATGCCACAGATCAAATTGTTGAA--TATGCGAAAGAAAAGCAAATTG    148
                     ||||.||.||||||||||||||  ||  ||||||||.|||||..|.||.|
BL01126___apt    101 GCTACGCGACAGATCAAATTGT--AACGTATGCGAAGGAAAAAGAGATCG    148

BSNT_04006___    149 ATTTGGTCGTTGGCCCTGAAGCGCGCGGCTTTATTATCGGCTGTCCCGTT    198
                     ||.|.|||||.||.|||||||||.|.||.|||||.||||||||.||.||.
BL01126___apt    149 ATCTCGTCGTGGGACCTGAAGCGAGAGGATTTATCATCGGCTGCCCTGTC    198

BSNT_04006___    199 GCTTACGCGCTTGGCGTAGGTTTTGCGCCGGTCCGCAAAGAAGGCAAGTT    248
                     ||.||.||||||||.|||||.||||||||.|||||||||||||||||..|
BL01126___apt    199 GCATATGCGCTTGGGGTAGGGTTTGCGCCTGTCCGCAAAGAAGGCAAACT    248

BSNT_04006___    249 GCCTCGTGAAGTAATCAAAGTGGATTATGGCTTGGAATACGGAAAAGACG    298
                     |||.||.|||||.||||||||.||.||.||.||||||||.||||||||.|
BL01126___apt    249 GCCGCGCGAAGTCATCAAAGTCGACTACGGATTGGAATATGGAAAAGATG    298

BSNT_04006___    299 TATTAACGATCCACAAAGATGCGATTAAGCCTGGTCAGCGTGTGCTT-AT    347
                     |..|.||.|||||.||||||||.|||||.||.||.|||||.|| ||| ||
BL01126___apt    299 TCCTGACCATCCATAAAGATGCCATTAAACCGGGGCAGCGCGT-CTTGAT    347

BSNT_04006___    348 TACGGATGACCTGCTTGCGACAGGCGGCACAATTGAAGCGACAATCAAAC    397
                     .||.||.|||||||||||.||.|||||.||.||||||||.||.|||||.|
BL01126___apt    348 CACTGACGACCTGCTTGCAACCGGCGGGACGATTGAAGCAACGATCAAGC    397

BSNT_04006___    398 TTGTTGAAGAACTTGGCGGCGTTGTTGCTGGTATCGCTTTCTTAATCGAG    447
                     ||||||||||.||.||||||||.||.||.||.|||||||||.|.|||||.
BL01126___apt    398 TTGTTGAAGAGCTCGGCGGCGTCGTGGCCGGAATCGCTTTCCTGATCGAA    447

BSNT_04006___    448 CTTTCTTACCTTGACGGCAGAAATAAGCTCGAAGATTACGACATCTTAAC    497
                     ||..|.||.|||||.||.||||||||.||.||.|..||.||.||.|||||
BL01126___apt    448 CTGACATATCTTGAAGGAAGAAATAAACTGGACGGATATGATATTTTAAC    497

BSNT_04006___    498 ATTGATGAAATACTAA    513
                     .||||||.||||||||
BL01126___apt    498 CTTGATGCAATACTAA    513


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