Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04003 and BL01123
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence dna-align/BSNT_04003___yrvI.1.5803.seq
# -bsequence dna-align/BL01123___yrvI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04003___yrvI-BL01123___yrvI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04003___yrvI-BL01123___yrvI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04003___yrvI
# 2: BL01123___yrvI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 455
# Identity: 333/455 (73.2%)
# Similarity: 333/455 (73.2%)
# Gaps: 25/455 ( 5.5%)
# Score: 1141.0
#
#
#=======================================
BSNT_04003___ 1 ATGAGATTAGTTGTTCAGCGAGTAACAGAAGCAAGCGTTACAGT-GGACG 49
||||||||||||||||||||.||.|||||.|||||||||.|.|| ||| |
BL01123___yrv 1 ATGAGATTAGTTGTTCAGCGCGTCACAGATGCAAGCGTTTCGGTAGGA-G 49
BSNT_04003___ 50 AAGAGGTCGTCGGCCAAATTGGACAAGGCCTCATGGTGCTGGTCGGCATC 99
..|||...||||||.||||.||.|..|||.|.||||||||.||||||.|.
BL01123___yrv 50 GCGAGACTGTCGGCGAAATCGGCCTCGGCTTGATGGTGCTTGTCGGCGTG 99
BSNT_04003___ 100 ACTCATGATGATACAGA-AGATGATGCAGCTTATTTAGCCGATAAAGTTG 148
||.||.||.||||| || .||.|||||.||.|||||.||.||.||..|||
BL01123___yrv 100 ACGCACGAAGATAC-GAGCGAGGATGCCGCATATTTGGCGGAGAAGCTTG 148
BSNT_04003___ 149 TCAATCTCCGTATTTTCGATGACAGTGAAGG---AAAAATGAATCTGTCT 195
|||||||.||.|||||.||.|| |||||| |||.|||||.|||||.
BL01123___yrv 149 TCAATCTGCGAATTTTTGAGGA---TGAAGGCGAAAAGATGAACCTGTCG 195
BSNT_04003___ 196 CTTGTAGATATAGGAGGAGAGATTTTATCCGTCTCACAGTTTACGCTT-T 244
|||.|||||.|.||.||.....|||||||.||.||.|||||||| ||| |
BL01123___yrv 196 CTTTTAGATGTCGGGGGCTCCGTTTTATCGGTTTCTCAGTTTAC-CTTGT 244
BSNT_04003___ 245 ATGGAGATACGAAAAAAGGGCGCCGGCCGAA--CTACATGAACGCGGCCA 292
|.||.||.|||||||||||..|.|||||||| .|||| ||.|||||.|
BL01123___yrv 245 ACGGCGACACGAAAAAAGGAAGACGGCCGAATTTTACA--AAAGCGGCAA 292
BSNT_04003___ 293 AACCTGATAAAGCTTTAGGTC---TTTATGAAAAATGGAATGACCTGCTT 339
|.||.|||.|.||..| || |.||.|||.|.|||||...|.|||||
BL01123___yrv 293 AGCCCGATCAGGCGCT---TCAATTGTACGAAGAGTGGAACAGCATGCTT 339
BSNT_04003___ 340 CGTGAAAAAGGAATCAAAGTGGAGACCGGAACGTTTGGAGCAATGATGGA 389
||.|.||||||..|||..||.||.||.||||..|||||||.|||||||||
BL01123___yrv 340 CGCGCAAAAGGCGTCACTGTCGAAACGGGAAGATTTGGAGAAATGATGGA 389
BSNT_04003___ 390 TGTTCAGCTTACAAACTCCGGACCGGTTACGCTCATTATGGATTCAAA-- 437
|||..||||.|||||.||.||.||.||.|||.|.|||||||||||.||
BL01123___yrv 390 TGTCAAGCTGACAAATTCGGGTCCCGTCACGTTTATTATGGATTCGAAAG 439
BSNT_04003___ 438 -ATAA 441
||||
BL01123___yrv 440 CATAA 444
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