Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01761 and BL01114
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence dna-align/BSNT_01761___hemAT.1.5803.seq
# -bsequence dna-align/BL01114___hemAT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01761___hemAT-BL01114___hemAT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01761___hemAT-BL01114___hemAT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01761___hemAT
# 2: BL01114___hemAT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1349
# Identity: 932/1349 (69.1%)
# Similarity: 932/1349 (69.1%)
# Gaps: 106/1349 ( 7.9%)
# Score: 2916.5
#
#
#=======================================
BSNT_01761___ 1 TTGTTATTTAAAAAAGACAGAAA-ACAAGAAACAGCTTACTTTTCAGATT 49
.|||||||.|||||.||.||||| || |||| .|.|.|.|||| |.
BL01114___hem 1 GTGTTATTCAAAAAGGATAGAAAGAC-AGAA--CGATCATTTTT----TG 43
BSNT_01761___ 50 C-----AAA---CGGACAGCAAAAAAACCGCATTCA-GCTCACAAACAAA 90
| ||| |.||| ||||.|||..| |.||| |||| ||..|.
BL01114___hem 44 CTGGGGAAAGCCCTGAC--CAAACAAAAAG-AATCAGGCTC---AATCAG 87
BSNT_01761___ 91 CATGCAGATGTCAAAAAACAGCTCAAAATGGTCAGGCTGGGA--GATGCT 138
||.|||||..|.|||||||||||...||||||| |.|..|| ||||..
BL01114___hem 88 CACGCAGAATTTAAAAAACAGCTGGCAATGGTC--GATTTGACGGATGAG 135
BSNT_01761___ 139 GAGCTTTACGTGTTAGAGCA-GCTTCAGCCACTGATTCA-AGAAAATATC 186
||.||||..|||.| ||||| |||..|||| ||.|.||| .|||.||||.
BL01114___hem 136 GATCTTTGGGTGCT-GAGCAGGCTGAAGCC-CTTAGTCACTGAACATATT 183
BSNT_01761___ 187 GTATACATCGTCGATGCG-TTTTATAAAAATCTTGACCATGAAAGCTCAT 235
|.|..||||||| |..|| ||||||.||||||||||.|||||||||||..
BL01114___hem 184 GAAACCATCGTC-ACCCGATTTTATCAAAATCTTGAGCATGAAAGCTCTC 232
BSNT_01761___ 236 TGATGGATATCATTAATGATCACAGCTCAGTTGACCG-CTTAAAACAAAC 284
|.|||||.|||||..||||..|||||||.||.||||| ||.|||| |.||
BL01114___hem 233 TCATGGAGATCATCCATGACAACAGCTCGGTCGACCGTCTCAAAA-AGAC 281
BSNT_01761___ 285 GTTAAAACG--GCATATTCAGGAAATGTTTGCAGGTGTTATCGATGATGA 332
.|| .||| .||.||.||||||||||||.||||.||.|||||.||.|.
BL01114___hem 282 ATT--GACGATCCACATCCAGGAAATGTTTTCAGGCGTCATCGACGAAGC 329
BSNT_01761___ 333 ATTCATTGAAAAGCGAAACCGAATCGCCTCCATCCATTTAAGAATCGGCC 382
.||..|.|||||..|||.|||.||||||..|.|.|||.|..|.|||||.|
BL01114___hem 330 CTTTTTAGAAAAAAGAATCCGGATCGCCCACGTTCATCTTCGCATCGGAC 379
BSNT_01761___ 383 TTCTGCCAAAATGGTATATGGGCGCATTTCAAGAACTCATTTTGTCAATG 432
|..|||||||.||||||.||||.|||||||||||.|||.||.|.||||||
BL01114___hem 380 TGTTGCCAAAGTGGTATCTGGGGGCATTTCAAGATCTCCTTCTTTCAATG 429
BSNT_01761___ 433 ATTGACATTTATG-AAGCGTCCATTA-CAAATCAGCAA-------GAACT 473
.|..|.||.|.|| ||.|| |.||| |..||.||.|| |..||
BL01114___hem 430 CTGAAGATCTTTGAAAACG--CCTTATCCGATGAGGAATACAGGCGGTCT 477
BSNT_01761___ 474 GCTAAAAGCCATTAAAGCAACAACAAAAATCTTGAACTTAGAACAGCAGC 523
| |.||||||.| ||.|||||.|| |.|||.|.|||||||||.
BL01114___hem 478 G-TCAAAGCCGT--------CACCAAAATTC-TCAACATCGAACAGCAGA 517
BSNT_01761___ 524 TTGTCCTTGAAGCGTTTCAAAGCGAGTACA-ACCAGAC-CCG------TG 565
|.|||||.||.||.|||.||..||| ||| .|.|||| ||| ||
BL01114___hem 518 TCGTCCTGGAGGCCTTTGAAGACGA--ACACGCGAGACTCCGCAGACTTG 565
BSNT_01761___ 566 ATGAA-CAAGAAGAAAAGAAAAACCTTCTTCATCA-GAAAATTCAAGAAA 613
||||| .|||.|.|||.||| ||||| || |.|||||.||||.|
BL01114___hem 566 ATGAAGAAAGCAAAAATGAA-------CTTCA-CAGGCAAATTAAAGATA 607
BSNT_01761___ 614 CCTCTGGATCGATTGCCAATCTGTTTTCAGAAACAAGCAGATCAGTTCAA 663
|.||.||.||..|.|||..|.|.|||.|.|||||.|...|..|.||.||.
BL01114___hem 608 CTTCCGGTTCTTTGGCCGCTATATTTGCCGAAACGACGGGCGCCGTACAG 657
BSNT_01761___ 664 GAGCTTGTGGACAAATCT-----GAAGGCATTTCTC--AAGCATCCAAAG 706
||..|.||.||||||||| || ||.| ||.|.||.|.||
BL01114___hem 658 GAATTGGTCGACAAATCTTCCGAGA-------TCGCCGAAACGTCAAGAG 700
BSNT_01761___ 707 CCGGCACTGTA-ACATCCAGCACTGTTGAAGAAAAGTCGATCGGCGGAAA 755
||||.|| |.| |||.||....||||.|||.||||.||||||||||||||
BL01114___hem 701 CCGGAAC-GAAGACAGCCGTTTCTGTCGAACAAAAATCGATCGGCGGAAA 749
BSNT_01761___ 756 AAAAGAGCTAGAAGTCCAGCAAAAACAGATGAACAAAATTGACACAAGC- 804
|||.|||||.||.|..|||.||.|.|||.||||..||||.| .||||
BL01114___hem 750 AAAGGAGCTTGAGGAACAGGAACAGCAGCTGAATCAAATGG---GAAGCA 796
BSNT_01761___ 805 -CTTGTC-CAAATCGAAAAAGAAATGGTCAAGCTGGATGAAATCGCGCAG 852
|.||.| ||||||||..|.|||||....||||||||.||||||||||.|
BL01114___hem 797 GCATGACGCAAATCGAGCAGGAAATTAAAAAGCTGGAAGAAATCGCGCTG 846
BSNT_01761___ 853 CAAATTGAAAAAATCTTCGGCATCGTCACAGGCATAGCTGAACAAACAAA 902
||.||.|||||.||.|||||||||||.||||||||.||.|||||.||.||
BL01114___hem 847 CAGATCGAAAAGATATTCGGCATCGTAACAGGCATTGCCGAACAGACGAA 896
BSNT_01761___ 903 CCTTCTCTCGCTCAATGCATCTATTGAATCCGCCCGCGCCGGAGAACACG 952
..|.||.||||||||.||.||.||.|||||.||..|.||.|||||.||||
BL01114___hem 897 TTTGCTTTCGCTCAACGCCTCGATCGAATCGGCAAGGGCAGGAGAGCACG 946
BSNT_01761___ 953 GCAAAGGCTTTGCTGTCGTGGCAAATGAAGTGCGGAAGCTTTCTGAGGAT 1002
|||||||.||.||.||.||.|||||.|||||..|.|||||.||.||.|||
BL01114___hem 947 GCAAAGGTTTCGCAGTTGTCGCAAACGAAGTCAGAAAGCTGTCCGATGAT 996
BSNT_01761___ 1003 ACGAAAAAAACCGTCTCTACTGTTTCTGAGCTTGTGAACAATACGAATAC 1052
|||||||||||||||||.||.||.||.|||||.||.||.||.||.||..|
BL01114___hem 997 ACGAAAAAAACCGTCTCCACCGTATCAGAGCTCGTCAATAACACAAACGC 1046
BSNT_01761___ 1053 ACAAATCAACATTGTATCCAAGCATATCAAAGACGTGAATGAGCTAGTCA 1102
.||||||...||.||..|.||||||||.|.|||.||.|||.||||.||.|
BL01114___hem 1047 TCAAATCTCGATCGTCACGAAGCATATTACAGATGTAAATCAGCTTGTGA 1096
BSNT_01761___ 1103 GCGAAAGTAAAGAAAAAATGACGCAAATTAACCGCTTATTCGATGAAATC 1152
.||||||.|||||.||.|||.||.|.||.||.|||.||||||||||.|||
BL01114___hem 1097 ACGAAAGCAAAGACAAGATGTCGGAGATCAATCGCCTATTCGATGATATC 1146
BSNT_01761___ 1153 GTCCACAGCATGAAAATCAGCAAAGAGCAATCAGGCAAAATCGACGTCGA 1202
|||..||..|||||||..||||||||||||...|||..||||||.|.|||
BL01114___hem 1147 GTCTCCAATATGAAAACGAGCAAAGAGCAAAGCGGCCGAATCGAAGGCGA 1196
BSNT_01761___ 1203 TCTGCAAGCCTTTCTTGGAGGGCTTCAGGAAGTCA--GCCGCGCCGTTTC 1250
.|||||..|.|||.|..|.||.|||||.||.|||| || ||||||.||
BL01114___hem 1197 CCTGCAGTCGTTTTTAAGCGGCCTTCAAGATGTCAATGC--CGCCGTATC 1244
BSNT_01761___ 1251 CCATGTGGCCGCTTCCGTTGATTCGCTTGTCATCCTGACAGAAGAATAA 1299
.||.||.||.|.|||.||.|||||.||.||....||||||.||.|||.|
BL01114___hem 1245 ACAAGTCGCAGTTTCAGTCGATTCTCTCGTAGAGCTGACAAAAAAATGA 1293
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