Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01747 and BL01111
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence dna-align/BSNT_01747___aprN.1.5803.seq
# -bsequence dna-align/BL01111___apr.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01747___aprN-BL01111___apr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01747___aprN-BL01111___apr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01747___aprN
# 2: BL01111___apr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1230
# Identity: 804/1230 (65.4%)
# Similarity: 804/1230 (65.4%)
# Gaps: 174/1230 (14.1%)
# Score: 2545.0
#
#
#=======================================
BSNT_01747___ 1 GTGAGAAGCAAAAA---ATTGTGGATCAGCTTGTTGTTTGCGTTAACGTT 47
.|||..||.||||| .||.|||.|..|..||.||...||.||||.|.|
BL01111___apr 1 ATGATGAGGAAAAAGAGTTTTTGGCTTGGGATGCTGACGGCCTTAATGCT 50
BSNT_01747___ 48 AATCTTTACGATGGCGTTCAGCAA---CATGTCTGCGCAGGCT--GCCG- 91
..|.||.||||||||.||||||.| |..|||||| .||| ||||
BL01111___apr 51 CGTGTTCACGATGGCCTTCAGCGATTCCGCGTCTGC---TGCTCAGCCGG 97
BSNT_01747___ 92 -GAAAAAGCAGTACAGAAAAGAAATACATTGTCGGATTTAAG-CAGACAA 139
|||||| |...||||||.|.||.||||||||||||||| |.|
BL01111___apr 98 CGAAAAA----TGTTGAAAAGGATTATATTGTCGGATTTAAGTCGG---- 139
BSNT_01747___ 140 TGAGTG------CCATGAGTTCCGCCAAGAAAAAGGATGTTATTTCTGAA 183
||||| .|| ||||.| ||||||||..|.| |.||
BL01111___apr 140 -GAGTGAAAACCGCA-----TCCGTC---AAAAAGGACATCA----TCAA 176
BSNT_01747___ 184 AAA----GGCGGAAAGGTTCAAAAGCAATTTAAGTAT-GTTAACGCGGC- 227
|.| ||||||||.||..|.|||||.||| ||.|| .|.||||||||
BL01111___apr 177 AGAGAGCGGCGGAAAAGTGGACAAGCAGTTT-AGAATCATCAACGCGGCA 225
BSNT_01747___ 228 ----CGCAGCAACATTGGATGAAAAAGCTGTAAAAGAATTGAAAAAAGAT 273
||.||| |.||..||.||||..|..|.|||.|.|||||.|||
BL01111___apr 226 AAAGCGAAGC-----TAGACAAAGAAGCGCTTGAGGAAGTCAAAAATGAT 270
BSNT_01747___ 274 CCGAGCGTTGCATATGTGGAAGAAGATCATATTGCACATGAATATGCGCA 323
|||...||.||.|||||||||||.|||||..|.||.||||..|..|||||
BL01111___apr 271 CCGGATGTCGCTTATGTGGAAGAGGATCACGTAGCTCATGCTTTGGCGCA 320
BSNT_01747___ 324 ATCTGTTCCTTATGGCATTTCTCAAATTAAAGC---------GCCGGCTC 364
|.|.||||||||.||||||.|||..|||||||| ||.||
BL01111___apr 321 AACCGTTCCTTACGGCATTCCTCTCATTAAAGCGGACAAAGTGCAGG--- 367
BSNT_01747___ 365 TTCACTCTCAAGGCTACACAGGCTCTAACGTAAAAGTAGCTGTTATCGAC 414
||||||||||||..||..|.|||||||||||.||.||..|.||.
BL01111___apr 368 ------CTCAAGGCTACAAGGGAGCGAACGTAAAAGTCGCCGTCCTGGAT 411
BSNT_01747___ 415 AGCGGAATTGACTCTTCTCATCCTGACTTAAACGTCAG-AGGCGGAGCAA 463
|..|||||..|..||||||||||.|||||.||||| || .||||||||||
BL01111___apr 412 ACAGGAATCCAAGCTTCTCATCCGGACTTGAACGT-AGTCGGCGGAGCAA 460
BSNT_01747___ 464 GCTTCGTTCCTTCTGAAAC---AAACCCATACCAGGACGGCAGTTCTCAC 510
|||||||..||...|||.| .||| ||| |||||||.....|||
BL01111___apr 461 GCTTCGTAGCTGGCGAAGCTTATAAC----ACC--GACGGCAACGGACAC 504
BSNT_01747___ 511 GGTACGCATGTCGCCGGTACGATTGCCGCTCTTAATAACTCAATCGGTGT 560
||.||||||||.||||||||..|.||.||.|||.|.||..|||..|||||
BL01111___apr 505 GGCACGCATGTTGCCGGTACAGTAGCTGCGCTTGACAATACAACGGGTGT 554
BSNT_01747___ 561 TCTGGGCGTAGCGCCAAGCGCATCATTATATGCAGTAAAAGTGCTTGATT 610
..|.|||||.|||||.|.||.|||.||.||.||.||.||||||||..|||
BL01111___apr 555 ATTAGGCGTTGCGCCGAACGTATCCTTGTACGCGGTTAAAGTGCTGAATT 604
BSNT_01747___ 611 CAACAGGAAGCGGCCAATATAGCTGGATTATTAACGGCATTGAGTGGGCC 660
|||..||||||||....||.|||.|.|||.|.|.|||.||.||||||||.
BL01111___apr 605 CAAGCGGAAGCGGATCTTACAGCGGCATTGTAAGCGGAATCGAGTGGGCG 654
BSNT_01747___ 661 ATTTCCAACAA----TATGGATGTTATCAACATGAGCCTTGGCGGACCTA 706
| |.|||| .||||||||||||||||||||||||||.|||||..
BL01111___apr 655 A----CGACAAACGGCATGGATGTTATCAACATGAGCCTTGGAGGACCAT 700
BSNT_01747___ 707 CTGGTTCTACAGCGCTGAAAACA-GTAGTTGATAAAGCGGTTTCCAGCGG 755
|.||.||.||||||.|| ||||| |..|||||.||.||...|.|.||.||
BL01111___apr 701 CAGGCTCAACAGCGATG-AAACAGGCGGTTGACAATGCATATGCAAGAGG 749
BSNT_01747___ 756 TATCGTCGTTGCTGCCGCAGCCGGAAACGAAGGTTCATCCGGAAGCACAA 805
..|.|||||||..||.||.||.||.|||...||.||.||.||||.|||.|
BL01111___apr 750 GGTTGTCGTTGTGGCGGCTGCTGGGAACAGCGGATCTTCAGGAAACACGA 799
BSNT_01747___ 806 GCACAGTCGGCTACCCTGCAAAATATCCTTCTACT-----ATTGCAGTAG 850
..|||.|||||||.|||||.||||| |.||| ||.|||||.|
BL01111___apr 800 ATACAATCGGCTATCCTGCGAAATA-----CGACTCTGTCATCGCAGTTG 844
BSNT_01747___ 851 GTGCGGTAAAC---AGCAGCAACCAAAGAGCTTCATTCTCCAGCGTAGGT 897
|.||||||.|| |.||||||| |||||||||||.||||||||.||.
BL01111___apr 845 GCGCGGTAGACTCTAACAGCAAC---AGAGCTTCATTTTCCAGCGTCGGA 891
BSNT_01747___ 898 TCTGAGCTTGATGTAATGGCTCCT------GGCGTGTCCATCCAAAGCAC 941
.|.||||||||.||.||||||||| |||||||.||
BL01111___apr 892 GCAGAGCTTGAAGTCATGGCTCCTGGCGCAGGCGTGTACA---------- 931
BSNT_01747___ 942 ACTTCCTGGAGGCACTTA------CGGCGCTTAT---------AACGGAA 976
||||||| |.||.||||| |||||||
BL01111___apr 932 -----------GCACTTACCCAACCAGCACTTATGCAACATTGAACGGAA 970
BSNT_01747___ 977 CGTCCATGGCGACTCCTCACGTTGCCGGAGCAGCAGCGCTAATTCTT-TC 1025
||||.|||||..|||||||.||.||.|||||||||||..|.| |||| ||
BL01111___apr 971 CGTCAATGGCTTCTCCTCATGTAGCGGGAGCAGCAGCTTTGA-TCTTGTC 1019
BSNT_01747___ 1026 TAAGCACCCGA---------CTTGGACAAACGCGCAAGTCCGTGATCGTT 1066
.||.||.|||| ||| |.||||||||..|.|||.
BL01111___apr 1020 AAAACATCCGAACCTTTCAGCTT---------CACAAGTCCGCAACCGTC 1060
BSNT_01747___ 1067 TAGAAAGCACTGCAACATATCTTGGAAACTCTTTCTACTATGGAAAAGGG 1116
|....||.||.||.||.|||.|.||||.|||.|||||||||||||||||.
BL01111___apr 1061 TCTCCAGTACGGCGACTTATTTGGGAAGCTCCTTCTACTATGGAAAAGGT 1110
BSNT_01747___ 1117 TTAATCAACGTACAAGCAGCTGCACAATAA 1146
.|.|||||.||..||||.||.||.||||||
BL01111___apr 1111 CTGATCAATGTCGAAGCTGCCGCTCAATAA 1140
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