Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01731 and BL01107
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_01731___fabHB.1.5803.seq
# -bsequence dna-align/BL01107___fabHB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01731___fabHB-BL01107___fabHB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01731___fabHB-BL01107___fabHB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01731___fabHB
# 2: BL01107___fabHB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1028
# Identity: 704/1028 (68.5%)
# Similarity: 704/1028 (68.5%)
# Gaps: 82/1028 ( 8.0%)
# Score: 2197.5
#
#
#=======================================
BSNT_01731___ 1 ATG---------TCAAAAGCAAAAATTACAGCTATCGGCACCTATG--CG 39
||| ||||||||...||||.|.||.||||||||||||| |
BL01107___fab 1 ATGAAAACTTTATCAAAAGCGCGAATTTCCGCCATCGGCACCTATGTTC- 49
BSNT_01731___ 40 CCGA-----GCA-GACGTTTAACCAATGCAGATTTAGAAAAGATCGTTGA 83
|||| ||| ||| ||.||| |||.||.||||||||||||||
BL01107___fab 50 CCGAAAAGCGCATGAC----AAACAA---AGAGTTTGAAAAGATCGTTGA 92
BSNT_01731___ 84 TACCTCTGATGAATGGATCGTTCAGCGCACAGGAATGAGAGAACGCCGGA 133
|||.|||||||||||||||.|||||||.||||||||||.||||.|.||.|
BL01107___fab 93 TACTTCTGATGAATGGATCATTCAGCGGACAGGAATGAAAGAAAGGCGAA 142
BSNT_01731___ 134 TTGC--GGA-TGAACATCAATTTACCTCTGATTTATGCATAGAAGCGG-T 179
|.|| ||| | ||..||||.||.||.|||.|.||||||.|.|||| |
BL01107___fab 143 TCGCCGGGAGT---CACGAATTCACATCAGATCTTTGCATAAAGGCGGTT 189
BSNT_01731___ 180 GAAGAATCTCAAGAGCCGTTATAAAGGAACACTTGATGATGTCGATATGA 229
|||| ||||.||.|.|.|.||.|..||.||.|||||.|||.|.||.||||
BL01107___fab 190 GAAG-ATCTAAAAAACAGATACAGCGGCACGCTTGACGATATTGACATGA 238
BSNT_01731___ 230 TCCTCGTTGCCACAACCACATCCGATTACGCCTTTCCGAGTACGGCATGC 279
||.||||..|.||.||.||..|.||||||||.|||||.||.|||||||||
BL01107___fab 239 TCATCGTCTCTACCACAACGGCGGATTACGCTTTTCCAAGCACGGCATGC 288
BSNT_01731___ 280 CGCGTACAGGAATATTTCGGCTGGGA--AAGCACCGGCGCGCTGGATATT 327
|..||.||||||.|.|||||.|||.| ||| ..||||||.|.|||.|.
BL01107___fab 289 CAGGTTCAGGAACACTTCGGATGGAACGAAG--TGGGCGCGGTCGATGTA 336
BSNT_01731___ 328 AATGCGACATGCGCCGGGCTGACTTACGGCCTCCATTTGGCAAATGGATT 377
||||||||.|||||.||..|..|.|||||..|.|||.||||.||.||..|
BL01107___fab 337 AATGCGACCTGCGCAGGATTAGCGTACGGATTGCATATGGCCAACGGCCT 386
BSNT_01731___ 378 GATCACATCAGGCCTTCATCAAAAAATTCTCGTCATCGCCGGAGAGACGT 427
.|||||.||.||.||.|||..|||||||||.||.|||..|||.||.||.|
BL01107___fab 387 CATCACTTCCGGACTGCATAGAAAAATTCTTGTGATCAGCGGGGAAACCT 436
BSNT_01731___ 428 TATCAAAGGTAACGGATTATACCGATCGAACGACATGCGTACTGTTCGGC 477
|||||||...|||.||.|||||.||.||.|||.|.|||.|..|||||||.
BL01107___fab 437 TATCAAAAACAACCGACTATACAGACCGCACGTCTTGCATTTTGTTCGGA 486
BSNT_01731___ 478 GATGCCGCGGGTGCGCTGTTAGTAGAACGAGATGA-AGAGACGCCGGGAT 526
||.|.|||.||.||.|||.|.||.|||||.||.|| |.|||| ||..|.|
BL01107___fab 487 GACGGCGCAGGCGCCCTGCTTGTCGAACGGGACGACAAAGAC-CCAAGCT 535
BSNT_01731___ 527 TTCTTGCGTCTGTACAAGGA-ACAAGCGGGAACGG---CGGCGATATTTT 572
||.||.|.|.|| .|.|||| ||.|..||..|||| |.||.| |||
BL01107___fab 536 TTATTACTTTTG-CCCAGGACACGAAAGGTGACGGAGCCCGCCA---TTT 581
BSNT_01731___ 573 GTATCGTGCCGGACTGCGAAATGAAATAAACGGTGTGCAGCTTGTC-GGT 621
.||..|..||||..||||||..||..|.||.||.|.||.|||| || |||
BL01107___fab 582 ATACAGAACCGGCTTGCGAAGCGACCTTAAAGGAGAGCCGCTT-TCAGGT 630
BSNT_01731___ 622 TCCGGAAAAATGGTGCAAAACGGACGCGAGGTATATAAATGGGCCGCAAG 671
...||.||||||||.||||||||.|||||.||.|||||.|||||.|..||
BL01107___fab 631 GAAGGGAAAATGGTTCAAAACGGCCGCGAAGTGTATAAGTGGGCGGTCAG 680
BSNT_01731___ 672 AACCGTCCCT---GGCG----AATTTGAACGGCTTTTACATAAAGCAGGA 714
..||||.||| |||| || |||.||||...| ||||.|.|
BL01107___fab 681 GTCCGTTCCTGAAGGCGTCAAAA----AACTGCTTGCCC---AAGCTGAA 723
BSNT_01731___ 715 CT-CAGCTCTG-ATGATCTCGATTGGTTTGTTCCTCACAGCGCCAACTTG 762
.| .|| ||| |.|||.||||||||||.||.||.||||||||.||..||
BL01107___fab 724 ATGGAG--CTGAAAGATATCGATTGGTTCGTCCCGCACAGCGCGAATCTG 771
BSNT_01731___ 763 CGCATGATCGAGTCAATTTGTGAAAAAACACCG---TTCCCGATTGAAAA 809
||.||||||||.||.|||||.|||||| |||| ||||.| ..|||||
BL01107___fab 772 CGAATGATCGAATCGATTTGCGAAAAA--ACCGAAATTCCAG-CCGAAAA 818
BSNT_01731___ 810 AACGCTCACTAGTGTTGAACACTATGGAAACACGTCTTCGGTTTCAATTG 859
|.||||.||.||.||.|||...|.|||.|||||.||.||.|..|||||.|
BL01107___fab 819 AGCGCTGACAAGCGTCGAATGGTTTGGCAACACCTCATCCGCATCAATCG 868
BSNT_01731___ 860 TTTTGGCGCTCGATCTCGCAGTGAAAGCCGGGAAGCTGAAAAAAGATCAA 909
||.|.||.||.|||...||.||.|||..|||.|||||||||||||...|.
BL01107___fab 869 TTCTCGCCCTTGATGAAGCCGTCAAAAACGGAAAGCTGAAAAAAGGCGAC 918
BSNT_01731___ 910 ATCGTTTTGCTTTTCGGGTTTGGCGGCGGATTAACCTATACAGGATTGCT 959
|.|.|..|.||.|||||.||||||||.||..|.||.|||||.||..||.|
BL01107___fab 919 ACCTTGATTCTGTTCGGTTTTGGCGGGGGTCTTACATATACGGGCCTGAT 968
BSNT_01731___ 960 TATTAAATGGGGAATG---------TAA 978
|.|.||||||||...| |||
BL01107___fab 969 TGTAAAATGGGGCGCGCCAGCTTCCTAA 996
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