Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01777 and BL01091
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence dna-align/BSNT_01777___yhjE.1.5803.seq
# -bsequence dna-align/BL01091___yhjE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01777___yhjE-BL01091___yhjE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01777___yhjE-BL01091___yhjE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01777___yhjE
# 2: BL01091___yhjE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 444/639 (69.5%)
# Similarity: 444/639 (69.5%)
# Gaps: 45/639 ( 7.0%)
# Score: 1467.5
#
#
#=======================================
BSNT_01777___ 1 ATGTTGGAGCATTTTTTATCCTATTTGACACAAGAACATTTAACTGAATT 50
||||||||.||.||...||||||.|||.||||..|||||||.||.||
BL01091___yhj 1 ---TTGGAGCAATTATTCAGCTATTTTACAGAAGAGAATTTAACAGAGTT 47
BSNT_01777___ 51 ATTTCAAAGCTATAGGGCTTTCGGTCCGCTCATAGCTGTGCTGCTGCCTT 100
.|||||.|||||.||||||||.|||||..|..||||.||.||||||||.|
BL01091___yhj 48 TTTTCAGAGCTACAGGGCTTTTGGTCCTTTTGTAGCCGTACTGCTGCCGT 97
BSNT_01777___ 101 TAATTGAAGCATTTCTCCCGTTTTTGCCGCTGATCGTGTTTGTGGTGGCG 150
|.||||||||..|.||||||||||||||.|||.||||||||||.||.||.
BL01091___yhj 98 TTATTGAAGCGCTGCTCCCGTTTTTGCCCCTGCTCGTGTTTGTTGTTGCC 147
BSNT_01777___ 151 AATACGAACTCGTTTGGCTTGTGGGAAGGATTCATCCTGTCTTGGG-CGG 199
|||...||.|||||.||.||.|||.|.||.||..|..||.|.|||| |||
BL01091___yhj 148 AATGTAAATTCGTTCGGTTTATGGCAGGGGTTTTTGTTGACGTGGGTCGG 197
BSNT_01777___ 200 GATCAACTGCTGGTTCCATTCTCGTATTTTTGATTGTCCGTCAATACGGA 249
| .||.||...|||||.||....||.|||.|..||.||||.||.|.|||.
BL01091___yhj 198 G-GCATCTTTAGGTTCTATAGCGGTTTTTCTTTTTATCCGCCATTTCGGC 246
BSNT_01777___ 250 CAGAGAAAATTGCTTGGATTTATCCGCAGTCATCCGTCTGTAAGAAAGCT 299
|||..||||...||.||.|||||||||||.|||||.||.||||.|||.||
BL01091___yhj 247 CAGCAAAAAGCACTCGGTTTTATCCGCAGGCATCCATCCGTAAAAAAACT 296
BSNT_01777___ 300 GATGTTATGGGTGGAAAGGCACGGCTTCGGTCCCATGTTTCTTCTGCTTT 349
||||.|.||||||||||..|..|||||||||||..|||||||.|||||||
BL01091___yhj 297 GATGATCTGGGTGGAAAAACGGGGCTTCGGTCCGCTGTTTCTCCTGCTTT 346
BSNT_01777___ 350 GTTTTCCATTTACACCGTCAGCCGCAGTGAATGTTGTTGCTGG--TTTGT 397
|.||||||||.||.||.||.||.||.||.||||||||.||.|| |||..
BL01091___yhj 347 GCTTTCCATTCACGCCTTCGGCGGCGGTAAATGTTGTGGCAGGACTTTCG 396
BSNT_01777___ 398 CAAGGATCGGAACGCGGCCGTTTATTTTGGCGGCAGCCTCG-GGGAAGCT 446
|.|| ||.|...||.|||.|||...||||||| .||.|.| ||.|||.|
BL01091___yhj 397 CGAG--TCAGCCTGCTGCCTTTTTCATTGGCGG-TGCTTTGCGGCAAGTT 443
BSNT_01777___ 447 TGTCATGATTTTTATGATCAGCTTCATCGGATATGATCTGCACGCGCTGA 496
.||.||||||||||||.|.|||||..||||..||||||||.|.|||||..
BL01091___yhj 444 CGTGATGATTTTTATGGTGAGCTTTGTCGGCCATGATCTGAAGGCGCTTT 493
BSNT_01777___ 497 TTACACAGCCGATTCGAACGGTCA-TCGCCGTATTGGTGATCA------- 538
||||.||||| ||.| |||.|| .|||| |||||||
BL01091___yhj 494 TTACCCAGCC--TTTG--CGGACAGCCGCC------GTGATCATCGTCAT 533
BSNT_01777___ 539 -CTG-TCTTATGGTATGTCGGCAAAAAGGTGGAGCGGTATCTGTATGTAA 586
||| ||||||||||.|.|||.|||..|||.||.|....||||.|.||.|
BL01091___yhj 534 GCTGATCTTATGGTACGCCGGAAAACGGGTTGAACATCGTCTGAACGTGA 583
BSNT_01777___ 587 GAGCCAGTCAGCGTGAGCATGATGGAGGGAGAC-AGTAA 624
||..|||.|||.|.|||.| |||| ||
BL01091___yhj 584 GATTCAGCCAGAGAGAGAA----------AGACTAG--- 609
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