Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01768 and BL01090
See
Amino acid alignment /
Visit
BSNT_01768 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence dna-align/BSNT_01768___comK.1.5803.seq
# -bsequence dna-align/BL01090___comK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01768___comK-BL01090___comK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01768___comK-BL01090___comK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01768___comK
# 2: BL01090___comK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 627
# Identity: 414/627 (66.0%)
# Similarity: 414/627 (66.0%)
# Gaps: 96/627 (15.3%)
# Score: 1317.0
#
#
#=======================================
BSNT_01768___ 1 ATGAGTCAGAAAACAGACG------CACCTTTAGAAT-CGTATGAAGTGA 43
||||| .|||||.| || .||.|| ||||||||||.|
BL01090___com 1 ATGAG------CACAGAGGATATGACA----AAGGATACGTATGAAGTAA 40
BSNT_01768___ 44 ACGGCGCAACAATTGCCGTGCTGCC------AGA-----AGAAATAGACG 82
||.|..|.|||||.||.||.||||| ||| ||||| .|.
BL01090___com 41 ACAGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGAGAAA---CCC 87
BSNT_01768___ 83 GCAAAATCTGTTCCAAAATTA-TTGAAAAAGA-------TTGCGTGTTTT 124
|| || |||||.|| ||||.|..|| ||.||
BL01090___com 88 GC-----CT----CAAAAATACTTGAGACCGACAGGACTTTCCG------ 122
BSNT_01768___ 125 ATGTCAACATGAAGCCGCTGCAAATTGTCGACAGAAGCTGCCGATTTTTT 174
.|||||.|||||||||.|.||||||.||||.|||||||||||.|.|||.
BL01090___com 123 -CGTCAATATGAAGCCGTTTCAAATTATCGAAAGAAGCTGCCGCTATTTC 171
BSNT_01768___ 175 GGATCAAGCTATGCGGGAAGAAAAGCAGGAACTTATGAAGTGACAAAAAT 224
|||||.||||||||||||||||||||.||.||.||||||||.|..|||.|
BL01090___com 172 GGATCGAGCTATGCGGGAAGAAAAGCGGGCACATATGAAGTCATTAAAGT 221
BSNT_01768___ 225 TTCACACAAGCCGCCAATCATGGTGGACCCTTCGAATCAA-ATCTTTTTA 273
|||.||.||.|||||.|||||||||||.|..|| ||.||| ||.|||.|.
BL01090___com 222 TTCCCATAAACCGCCGATCATGGTGGATCACTC-AAACAACATTTTTCTT 270
BSNT_01768___ 274 TTCCCTACACTTTCTTCGACAAGACCCCAATGCGGCTGGATTTCCCATGT 323
|||||.|||.||||.||.||..|.||.||.|||||.|||.|||||||||.
BL01090___com 271 TTCCCCACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC 320
BSNT_01768___ 324 GCATGTAAAAGAATT--------CAAAGCGACTGAATTCGACGATACGGA 365
||||||..|.||.|| ||||| |..|||.|.|||..
BL01090___com 321 GCATGTTCACGAGTTTTGCGCGGCAAAG--------TATGACAACACGTT 362
BSNT_01768___ 366 AGTGACGTTT-TCAAATGGGAAAACGATGGAGCTGCC--GATC--TCTTA 410
.||.|||||| || ||.|||.|||||.|||||||||| .||| |||.|
BL01090___com 363 TGTCACGTTTGTC-AACGGGGAAACGCTGGAGCTGCCCGTATCCATCTCA 411
BSNT_01768___ 411 TAATTCGTTCGAGAACCAGGTATATCGAACAGCGTGGCTTAGAACCAAGT 460
||.|||||.||||||||.||.|||||.||.|||||.|||||.||.|
BL01090___com 412 ----TCTTTCGAAAACCAGGTTTACCGAACGGCATGGCTGAGAACAAAAT 457
BSNT_01768___ 461 TCCAAGACAGAATCGA---CCACCGCGTGCCGAAAAGGCAGGAATTTATG 507
|....|||||.||.|| ..|||.|.|||.|||.|..||||||||||||
BL01090___com 458 TTATCGACAGGATTGAAGGAAACCCCATGCAGAAGAAACAGGAATTTATG 507
BSNT_01768___ 508 CTGTACCCGAAGGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCG 557
||.||.|||||.|||||.||||...||.||||.||.||.||.||..|..|
BL01090___com 508 CTCTATCCGAAAGAAGACCGGAATCAGCTGATATACGAATTCATCCTCAG 557
BSNT_01768___ 558 TGAGCTCGGGG----AGCGGTATTAG- 579
.||||| | ||||.|||| |
BL01090___com 558 GGAGCT----GAAAAAGCGCTATT-GA 579
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.