Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01745 and BL01084

See Amino acid alignment / Visit BSNT_01745 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence dna-align/BSNT_01745___yhfN.1.5803.seq
#    -bsequence dna-align/BL01084___yhfN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01745___yhfN-BL01084___yhfN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01745___yhfN-BL01084___yhfN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01745___yhfN
# 2: BL01084___yhfN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1370
# Identity:     899/1370 (65.6%)
# Similarity:   899/1370 (65.6%)
# Gaps:         202/1370 (14.7%)
# Score: 2894.0
# 
#
#=======================================

BSNT_01745___      1 ATGCGCAAGTGGATTGCGGCAGCAGGACTTGCT----TACGTGCTGTACG     46
                     |||||.||.|||||.||||.|||    |||.||    ||.||||||||||
BL01084___yhf      1 ATGCGGAAATGGATCGCGGGAGC----CTTTCTCCTGTATGTGCTGTACG     46

BSNT_01745___     47 GGCTGTTTTTTTATTGGTATTTTTTCCTGTCGGGTGATTCCGCAATACCG     96
                     |.||.|||||.|||||||||.|.||..||.|.|||||..||.|..|.||.
BL01084___yhf     47 GCCTTTTTTTCTATTGGTATCTCTTTATGGCCGGTGAACCCTCCGTTCCC     96

BSNT_01745___     97 GAAGCCGTGAAAGGGAC--GCAGGCTGATCCGGCTTCTTTCATGAAGCCG    144
                     ||.||..||||||||||  ||  ||.||.|||||..|.||.|||||  ||
BL01084___yhf     97 GAGGCGCTGAAAGGGACAAGC--GCAGACCCGGCGACATTTATGAA--CG    142

BSNT_01745___    145 -------------TCTGAGTTGGCAGTGGCCGAGCAGTATTCGAATGTCA    181
                                  .||||           |.||..||||.|||||..|.|
BL01084___yhf    143 AAAGGGAACTCATGCTGA-----------CGGAAGAGTACTCGAAAATAA    181

BSNT_01745___    182 AGAATTTTTTATTTTTTATCGGGGTACCACTTGATTGGTTTCTGTTTT--    229
                     ||.|.|||.|.|||||||||.||.|.||..||||.|||||..|.||||  
BL01084___yhf    182 AGGACTTTCTGTTTTTTATCCGGATTCCGTTTGAGTGGTTCTTATTTTTA    231

BSNT_01745___    230 ---TTGTTCTGCTTGTCAGCGGTGTTTCAAAGAAAATCAAGAAATGGATC    276
                        ||||  ||.|||   .||||.|.||.||||||||.|||||.||| .|
BL01084___yhf    232 ATATTGT--TGATTG---CCGGTTTATCGAAGAAAATGAAGAATTGG-GC    275

BSNT_01745___    277 GAAGCGGCCGT----GCCTTTTCGGTTTTTGCAGACCGTT---------G    313
                     |.|||.|.|||    ||             |.|||.||.|         |
BL01084___yhf    276 GGAGCAGACGTCAAAGC-------------GGAGAACGATTCAAATAACG    312

BSNT_01745___    314 GTTTTGTGTTTGTGCTTTCG---CTGATTACAACATTGGTGACGCTGCCT    360
                     | ..|.|||||.|||||| |   |||||....||..|.||..|..||||.
BL01084___yhf    313 G-CATATGTTTTTGCTTT-GTTTCTGATCGTCACGATCGTTTCTTTGCCG    360

BSNT_01745___    361 TTAGATTGGATAGGCTATCAAGTA-TCGCTTGACTATAACATTTCCACAC    409
                     .|.||.|||||..|||||||| || |||||||||||...|||.||.||||
BL01084___yhf    361 CTTGACTGGATCAGCTATCAA-TATTCGCTTGACTACGGCATATCAACAC    409

BSNT_01745___    410 AGACAACGGCCAGCTGGGCTAAGGATCAGGTTATCAGCTTTTGGATCAGC    459
                     |||||||.||.||||||...||.||.|||||.|||..|||.|||||||||
BL01084___yhf    410 AGACAACCGCGAGCTGGATCAAAGACCAGGTGATCGACTTCTGGATCAGC    459

BSNT_01745___    460 TTTCCAATCTTTAC-GCTTTGC----GTTCTCGTTTTTTATTGGCTGATC    504
                     |||||.|   |.|| ||  |||    ||..||||.|||||.|...|||||
BL01084___yhf    460 TTTCCGA---TAACGGC--TGCGGCGGTGATCGTCTTTTACTTTTTGATC    504

BSNT_01745___    505 AAAAGGCATGAAAAAAAATGGTGGTTATACGCCTGG---CTGTTAACAGT    551
                     ||||.||||||||||...||||||||.||.||||||   |||   ||.||
BL01084___yhf    505 AAAAAGCATGAAAAACGCTGGTGGTTTTATGCCTGGTGCCTG---ACGGT    551

BSNT_01745___    552 GCCGTTTTCGCTGTTTCTGTTTTTTATTCAGCCGGTCATTATCGATCCTT    601
                     .|||.||.||||||||.|.|||||..||||||||||..|.||||||||||
BL01084___yhf    552 TCCGGTTACGCTGTTTTTATTTTTCCTTCAGCCGGTTGTCATCGATCCTT    601

BSNT_01745___    602 TATACAATGATTTTTATCCGCTGAAAAACAAAGAGCTTGAAAGCAAA--A    649
                     ||||||||||.|||||||||||||||||.|||||.||.|||  ||||  |
BL01084___yhf    602 TATACAATGACTTTTATCCGCTGAAAAATAAAGATCTCGAA--CAAAGCA    649

BSNT_01745___    650 TTTTAGAGCTGGCAGATGAAGCCAATATTCCGGCTGACCATGTATATGAA    699
                     ||.|..|||||||.|||.|.||..|||||||.||..|.||.||.||||||
BL01084___yhf    650 TTCTGAAGCTGGCCGATCAGGCAGATATTCCTGCGAATCACGTCTATGAA    699

BSNT_01745___    700 GTGAACATGTCAGAAAAAACAAATGCGCTGAATGCCTATGTTACAGGAAT    749
                     |||||||||||.||||||||.||||||.|.|||||.|||||.|||||.||
BL01084___yhf    700 GTGAACATGTCTGAAAAAACGAATGCGTTAAATGCTTATGTGACAGGGAT    749

BSNT_01745___    750 TGGGGCCAATAAACGGATTGTATTGTGGGATACGACGCTGAACAAACTTG    799
                     .||.|||||||||.|||||||..|.||||||||.|||||||||||.||.|
BL01084___yhf    750 CGGCGCCAATAAAAGGATTGTGCTCTGGGATACCACGCTGAACAAGCTGG    799

BSNT_01745___    800 ACGATTCAGAAATCCTGTTTATTATGGGCCACGAAATGGGCCATTATGTC    849
                     |.||..|.|||||..|.||.|||||||..|||||||||||.||.|||||.
BL01084___yhf    800 ATGAGCCGGAAATTTTATTCATTATGGCGCACGAAATGGGGCACTATGTG    849

BSNT_01745___    850 ATGAAGCACGTTTACATCGGTCT-GGCTGGTTATTTGCTCGTGTCGCTCG    898
                     ||||||||.||||||||.||.|| ||| ||.||..||||..|.||.||.|
BL01084___yhf    850 ATGAAGCATGTTTACATAGGACTCGGC-GGGTACCTGCTTTTATCCCTTG    898

BSNT_01745___    899 CCGGATTTTATGTCATTGATAAGCTTTACAAGCGGA----CGGTTCGCCT    944
                     |||..||||||||.||.||.|||||.||||||||||    |||       
BL01084___yhf    899 CCGTCTTTTATGTGATCGACAAGCTGTACAAGCGGATCATCGG-------    941

BSNT_01745___    945 AACCCGCAGCATGTTTCATTTAGAAGGA----CGGCAT------------    978
                        ||||           |.|.|||..|    |.||||            
BL01084___yhf    942 ---CCGC-----------TATGGAAAAAGCCTCCGCATTGCGGGAAAATC    977

BSNT_01745___    979 -GATCTTGCGGCACTTCCGCTGTTAT-----TGCTTTT----GTTTTCTG   1018
                      ||||||||.|||||.||||  ||.|     ||||..|    ||..|||.
BL01084___yhf    978 CGATCTTGCCGCACTCCCGC--TTCTCCTGATGCTGATGGGGGTCATCTC   1025

BSNT_01745___   1019 TTTTGAG-CTTTGCGGTGACGCCTTTTTCTAATGCTGTCTCGCGTTATCA   1067
                     |||.|.| |||        |.||.|||.|.||.||.||.|||.|..||||
BL01084___yhf   1026 TTTCGCGTCTT--------CTCCATTTACAAACGCAGTTTCGAGGCATCA   1067

BSNT_01745___   1068 GGAGAATAAG--GCTGACCAGTATGGGATCGAGTTGACAGAGAACAGAGA   1115
                     |  |||.|||  |||||||||||||.|||.||..||||..|.|||||.||
BL01084___yhf   1068 G--GAAAAAGCCGCTGACCAGTATGCGATTGAACTGACGAACAACAGCGA   1115

BSNT_01745___   1116 AGCCGCTGTTAAAACGTTTCAGGATTTGGCCGTGA----CGGGGCTGAGC   1161
                     .||.||.|||...||.|||||.||    ||..|.|    |.|||.|||||
BL01084___yhf   1116 TGCAGCGGTTGCGACTTTTCAAGA----GCTCTCAAAAGCCGGGTTGAGC   1161

BSNT_01745___   1162 CAGGTTGATCCTCCGGTGCTTGTGAAGATTTTCAGAGGCAGCCATCCTTC   1211
                     .|||...|.||.|||.|.||.||.||||||||.|.|..|.|||||||..|
BL01084___yhf   1162 GAGGCGAACCCGCCGTTTCTCGTCAAGATTTTTAAATACGGCCATCCGAC   1211

BSNT_01745___   1212 GATCATGGAACGGATTCAACATGCGGAGAAAGAAGAGAATGCGCCGGAAC   1261
                     .||.|||||||||||||||.||      |..|||.||..|.|..|.||| 
BL01084___yhf   1212 CATAATGGAACGGATTCAAAAT------ATTGAACAGTCTTCAACTGAA-   1254

BSNT_01745___   1262 ATCAGGATGCTGACAAATAA   1281
                               |||       
BL01084___yhf   1255 ----------TGA-------   1257


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