Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01741 and BL01079
See
Amino acid alignment /
Visit
BSNT_01741 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_01741___yhfJ.1.5803.seq
# -bsequence dna-align/BL01079___yhfJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01741___yhfJ-BL01079___yhfJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01741___yhfJ-BL01079___yhfJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01741___yhfJ
# 2: BL01079___yhfJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1016
# Identity: 766/1016 (75.4%)
# Similarity: 766/1016 (75.4%)
# Gaps: 46/1016 ( 4.5%)
# Score: 2801.0
#
#
#=======================================
BSNT_01741___ 1 ATGTTATTTATAGACAATCAAAATATCAATGATCCGCGGATCAATCTT-G 49
|||.|.|||||.||.|||||||||||.|..||||||.||||||| ||| |
BL01079___yhf 1 ATGCTGTTTATCGATAATCAAAATATTACAGATCCGAGGATCAA-CTTGG 49
BSNT_01741___ 50 CTATCGAGGAGTACTGTGTAAAGCATTTAGACCCTGAACAGCAATATTTG 99
|.||.|||||||||||..||||||||.|.||.||||||.||...|||.||
BL01079___yhf 50 CGATTGAGGAGTACTGCTTAAAGCATCTCGATCCTGAAGAGACGTATCTG 99
BSNT_01741___ 100 CTCTTTTATGTGAATCAACCGTCTATTATCATTGGAAAAAACCAAAATAC 149
||.||||||.|.||.||.|||||.||.|||||.||.|||||.||||||||
BL01079___yhf 100 CTGTTTTATATCAACCAGCCGTCGATCATCATCGGCAAAAATCAAAATAC 149
BSNT_01741___ 150 AATAGAAGAAATCAATACAAAATATGTTGAGGAAAACGGGATTATCGTCG 199
.||.||.||||||||.|||||||||||.||.|||||||||||.||.||||
BL01079___yhf 150 GATCGAGGAAATCAACACAAAATATGTAGATGAAAACGGGATCATTGTCG 199
BSNT_01741___ 200 TCCGCCGTTTATCAGGCGGGGGAGCTGTGTACCATGATCTGGGGAACTTG 249
|||||.|..|.||||||||.||||||||.|||||||||||.|||||||||
BL01079___yhf 200 TCCGCAGGCTGTCAGGCGGCGGAGCTGTCTACCATGATCTCGGGAACTTG 249
BSNT_01741___ 250 AACTTCAGCTTTATTACCAAGGATGACGGGGACAGCTTTCATAACTTTAA 299
||||||||.||||||||.|||||.|||||..|||||||.||.|||||.||
BL01079___yhf 250 AACTTCAGTTTTATTACGAAGGACGACGGCAACAGCTTCCACAACTTCAA 299
BSNT_01741___ 300 AAAATTCACTGAGCCGGTGATTCAGGCGTTACATCAGCTTGGAGTTGAAG 349
.||.||.||||||||.||..|....||.|||.|.|.||||||.||.||.|
BL01079___yhf 300 GAAGTTTACTGAGCCCGTTGTGGCCGCTTTAAAACGGCTTGGCGTCGATG 349
BSNT_01741___ 350 CCGAATTAAGCGGCCGGAACGACATTGTAGTGG---ATGGCCGGAAAATA 396
|.||..|.||||||||.||||| |.|..||| |.|||||||||||.
BL01079___yhf 350 CGGAGCTGAGCGGCCGAAACGA---TTTGATGGCAAACGGCCGGAAAATC 396
BSNT_01741___ 397 TCCGGAAACGCTCAGTTTGCAACGAAAGGCCGTATTTTCAGCCACGGCAC 446
||.||||||||.||||||.||||||||||..|.||.||||||||||||||
BL01079___yhf 397 TCGGGAAACGCCCAGTTTTCAACGAAAGGAAGAATGTTCAGCCACGGCAC 446
BSNT_01741___ 447 CCTCATGTTTGATTCAGCCATTGATCATGTTGTATCAGCATTAAAGGTGA 496
.||..||||.|||||.|..|||||.|||||.|||||.||.|||||.||||
BL01079___yhf 447 GCTGTTGTTCGATTCTGAGATTGAACATGTCGTATCGGCTTTAAAAGTGA 496
BSNT_01741___ 497 AAAAGGATAAAATTGAATCAAAAGGCATCAAATCGATCAGAAGCCGAGTG 546
||||.||||||||.||||||||||||||.|||||||||||.|||||.|||
BL01079___yhf 497 AAAAAGATAAAATCGAATCAAAAGGCATTAAATCGATCAGGAGCCGTGTG 546
BSNT_01741___ 547 GCAAACATCAGTGAGTTTCTCGATGATAAAATGACCACCGAAGAATTCCG 596
||.||.||.||.||||||||||||.|.||.|||||.||.|..||||||||
BL01079___yhf 547 GCCAATATTAGCGAGTTTCTCGATCAGAAGATGACGACAGTGGAATTCCG 596
BSNT_01741___ 597 CAGCCATTTGCTT---CGCCATATTTTTAACA-CGAACGACATTGGAAAC 642
.||| .||||| |||.||||||||.|.| ||||.| |||||
BL01079___yhf 597 AAGC---ATGCTTCTCCGCTATATTTTTGATACCGAAGG-----GGAAA- 637
BSNT_01741___ 643 GTGCCGGAGTATAAGCTGACGGAAAAAGATTGGGAGACCATTCATCAAAT 692
|.|||||||||||||||||.||||||||.|||.|.|.||||.|||||||
BL01079___yhf 638 -TACCGGAGTATAAGCTGACTGAAAAAGACTGGAAAATCATTAATCAAAT 686
BSNT_01741___ 693 TTCGAAAGAGCGCTATCAGAATTGGGATTGGAACTACGGCCGCTCACCGA 742
|||.||.||.||||||||.||.||||||||||||||.||....||.||||
BL01079___yhf 687 TTCAAAGGAACGCTATCAAAACTGGGATTGGAACTATGGGAAGTCTCCGA 736
BSNT_01741___ 743 AATTTAACCTTAATCATTCGAAACGTTATCCGGTTGGATCGATCGATTTG 792
||||.||.||..|.|||||.|||||.|.||..|.|||||||.||||..|.
BL01079___yhf 737 AATTCAATCTGCAGCATTCTAAACGATTTCAAGCTGGATCGGTCGACATC 786
BSNT_01741___ 793 CGCCTAGAGGT-CAAGAAAGGCAAAATCGAGGACTGCAAAATCTTCGGAG 841
|||||.||.|| ||| ||||||...|||...||.||||||||.|||||.|
BL01079___yhf 787 CGCCTCGAAGTGCAA-AAAGGCGTGATCCGCGAGTGCAAAATATTCGGTG 835
BSNT_01741___ 842 ATTTCTTCGGTGTCGGTGATGT-------ATCTGAAATTGAAAACCTG-C 883
|.||.|||||.|||||.||||| ||| ||| ||.||.||| |
BL01079___yhf 836 ACTTTTTCGGAGTCGGAGATGTCAGCGACATC-GAA---GAGAAGCTGAC 881
BSNT_01741___ 884 TGGTCG-GAAAACAATACGAACG--CAGCGTCATCGCTGATGTGCTCGAA 930
.|| || | ||.||.|||.| .|||| ||.|..||.|..||..||
BL01079___yhf 882 AGG-CGTG----CAGTATGAAAGAAAAGCG--ATTGAAGAAGCTCTTCAA 924
BSNT_01741___ 931 GGTGTGAATCTCAAGCATTACTTTGGGAACATTACGAAAGAGGATTTCCT 980
||.|||.|..|.|||||||||||.||.||.|||...|||||.||.||..|
BL01079___yhf 925 GGCGTGGACATTAAGCATTACTTCGGCAATATTCAAAAAGAAGAATTTTT 974
BSNT_01741___ 981 TGATCTGATTTATTAA 996
.|||||..|.||.|||
BL01079___yhf 975 GGATCTTGTCTACTAA 990
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.