Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01740 and BL01078
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_01740___yhfI.1.5803.seq
# -bsequence dna-align/BL01078___yhfI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01740___yhfI-BL01078___yhfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01740___yhfI-BL01078___yhfI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01740___yhfI
# 2: BL01078___yhfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 750
# Identity: 546/750 (72.8%)
# Similarity: 546/750 (72.8%)
# Gaps: 30/750 ( 4.0%)
# Score: 1905.0
#
#
#=======================================
BSNT_01740___ 1 ATGAAAGTTACAGTTATCGGATGCTATGGCGGTTTTCCGGCCGCAAATGA 50
|||||.||.|||||.|||||.||||..||.||.||||||||.||||||||
BL01078___yhf 1 ATGAAGGTGACAGTCATCGGCTGCTGCGGAGGATTTCCGGCTGCAAATGA 50
BSNT_01740___ 51 AGCGACGTCAGGCTATTTGTTTCAGTCAGGTGATTACTCTCTGCTTGTT- 99
||||||.|||||||||.|.|||||.||.||.||.||.|| |.|.||
BL01078___yhf 51 AGCGACTTCAGGCTATCTCTTTCAATCCGGGGACTATTC----CGTTTTA 96
BSNT_01740___ 100 ---GATTGCGGCAGTGCCGTTTTGTC------TAAGCTGTTCGGATATGT 140
||.|||||||||||||||||.|| |.||||||| |.|
BL01078___yhf 97 ATCGACTGCGGCAGTGCCGTTTTATCCAAACTTCAGCTGTT------TCT 140
BSNT_01740___ 141 GCCGGCGGAAAAGCTGGATGCGGTCGTTCTGTCTCATTATCACCATGACC 190
|||.|..||..||||.|||||.||..|..|.||.||||||||.|||||||
BL01078___yhf 141 GCCCGTTGAGGAGCTAGATGCCGTTATATTATCCCATTATCATCATGACC 190
BSNT_01740___ 191 ATATCGCTGATATCGGGCCGCTGCAATTTGCCAAGCAAGTCGGTTCGTTT 240
||||.||.|||.||||.||..|||||||||||||.|..|||||.||.||.
BL01078___yhf 191 ATATTGCGGATGTCGGCCCTTTGCAATTTGCCAAACTGGTCGGCTCATTC 240
BSNT_01740___ 241 CTCGGCAAAGGAGAGCATACGCTTCCGATTTACGGACATGATGCTGATAT 290
||||||||.||||.|.||.|.||||||||.||.||||||..|..||||..
BL01078___yhf 241 CTCGGCAAGGGAGCGGATGCCCTTCCGATATATGGACATCCTTTTGATGA 290
BSNT_01740___ 291 AGAACAGTTTCAAAAGCTTACATATAAAACACATACGAAAGGGATCGCCT 340
|||.||||||..||||||||||||||||||.|||||....||..|.||.|
BL01078___yhf 291 AGAGCAGTTTTCAAAGCTTACATATAAAACGCATACCGCTGGATTGGCGT 340
BSNT_01740___ 341 ATCAGCCGGATCAGCCGCTGACTGCCGGTCCGTTTACGATTACCTTTTTA 390
||.|.|||...|||||..||.||..|||.|||||||||.|.||.||||||
BL01078___yhf 341 ATGATCCGACACAGCCTTTGGCTATCGGACCGTTTACGTTCACGTTTTTA 390
BSNT_01740___ 391 AAAACGATTCACCC-GGTGACGTGCTATGCCATGCGGATTACTGACGGCA 439
||||||.||||||| |.|||| ||||.|||||||.||.|.||.|||||..
BL01078___yhf 391 AAAACGGTTCACCCTGTTGAC-TGCTTTGCCATGAGGGTGACGGACGGTG 439
BSNT_01740___ 440 GTCACACTGTTGTTTATACTGCTGATTCCAGCTATCAGGATTCATTTATA 489
.|||..||||.||||||||.||.||.||.||||.||||||..|.|||||.
BL01078___yhf 440 TTCATTCTGTCGTTTATACGGCCGACTCGAGCTTTCAGGAAGCCTTTATT 489
BSNT_01740___ 490 CCGTT-TTCGAAAGATGCTGATTTATTGATCTCAGAATGCAATTTTTATG 538
||||| ..||||.|| ||.|||.|.|||||||||||.|||||.|||||||
BL01078___yhf 490 CCGTTCAGCGAAGGA-GCCGATCTCTTGATCTCAGAGTGCAACTTTTATG 538
BSNT_01740___ 539 CCGATCAAGACGGAACAAGTGCAGGCCATATGAACAGCCTGGAAGCCGGG 588
|.|||||.||.||.|..||.||.||.|||||||||||.||.|||||.|||
BL01078___yhf 539 CGGATCAGGATGGGAGGAGCGCCGGTCATATGAACAGTCTTGAAGCGGGG 588
BSNT_01740___ 589 CGCATTGCAAAAGAAGCGGGAGCGGGAGAACTGCTGCTGACACATTTGCC 638
||.||.||....||||||||.||.||..|.||.||..|||||||..|.||
BL01078___yhf 589 CGGATCGCTGCGGAAGCGGGTGCCGGGCAGCTTCTCTTGACACACCTCCC 638
BSNT_01740___ 639 GCATTTTGGCGTGCATGACAATCT--TCGCAAAGAAGCGAAAACCGTTTT 686
||||||.||.|..||..|.||.|| |.| ||||.||..|||||||||.
BL01078___yhf 639 GCATTTCGGGGAACACCAAAAACTGATAG--AAGAGGCCCAAACCGTTTA 686
BSNT_01740___ 687 TAACGGAGAAG-TGTATATTGCGAAATCAGGTTTTGTGTGGGAAGGATAA 735
|||.||.|..| ||| |.|.|||.|..|.||||.||||||||.||.|||.
BL01078___yhf 687 TAAAGGTGCGGTTGT-TCTGGCGCACACCGGTTATGTGTGGGGAGAATAG 735
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