Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01728 and BL01074
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:13
# Commandline: needle
# -asequence dna-align/BSNT_01728___hemY.1.5803.seq
# -bsequence dna-align/BL01074___hemY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01728___hemY-BL01074___hemY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01728___hemY-BL01074___hemY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01728___hemY
# 2: BL01074___hemY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1473
# Identity: 1040/1473 (70.6%)
# Similarity: 1040/1473 (70.6%)
# Gaps: 120/1473 ( 8.1%)
# Score: 3528.5
#
#
#=======================================
BSNT_01728___ 1 ATGAGTG----AC---GGCAAAAAACATGTAGTCATCATCGGCGGCGGCA 43
||||||| || ||||.| |.|||||||||||||||||.|
BL01074___hem 1 ATGAGTGGAGAACGCAGGCAGA-------TTGTCATCATCGGCGGCGGTA 43
BSNT_01728___ 44 TTACCGGTTTAGCCGCCGCCTTCTATATGGAAAAAGAAATCAAAGAAAAG 93
|||||||.||.||||||||||||||..||||.||.|||||||||.|.||.
BL01074___hem 44 TTACCGGGTTGGCCGCCGCCTTCTACTTGGAGAAGGAAATCAAAAAGAAT 93
BSNT_01728___ 94 AATCTGCCGCTTGAAATGACGCTTGTTGAGGCAAGTCCGAGAGTCGGCGG 143
.||||.|||...|||.|.|||||||||||.|||||.||||||.|.|||||
BL01074___hem 94 GATCTCCCGGCCGAAGTCACGCTTGTTGAAGCAAGCCCGAGACTGGGCGG 143
BSNT_01728___ 144 AAAAATCCAGACTGTCAAGAAGGACGGCTATATCATCGAAAGAGGGCCAG 193
|||.||.|||||.||..|.||.|||||||||.|.||.|||.|.||.||.|
BL01074___hem 144 AAAGATGCAGACGGTACACAAAGACGGCTATGTGATTGAACGGGGTCCGG 193
BSNT_01728___ 194 ACTCATTTCTGGAACGAAAGAAAAGCGCCCCGCAGCTTGTTAAAGACTTA 243
|.||||||.|||||||.||..|||||||.||.|||||.||.||.||..|.
BL01074___hem 194 ATTCATTTTTGGAACGGAAACAAAGCGCACCTCAGCTCGTGAAGGATCTC 243
BSNT_01728___ 244 GGTCTTGAGCATTTGCTTGTCAACAATGCGACCGGACAATCCTATGTGCT 293
||.||.||||||||||||||.|||||||||||.||.||.||.||||||||
BL01074___hem 244 GGACTGGAGCATTTGCTTGTGAACAATGCGACTGGCCAGTCTTATGTGCT 293
BSNT_01728___ 294 TGTAAACCGCACCCTGCATCCAATGCCGAAGGGCGCTGTAATGGGGATAC 343
|||.|.|...||.||..||||.||.|||.|.||.||.||.||||||.|.|
BL01074___hem 294 TGTCAGCGAAACGCTCTATCCGATTCCGGAAGGAGCCGTGATGGGGGTGC 343
BSNT_01728___ 344 CGACAAAAATTGCGCCGTTTGTTTCTACGGGTCTGTTTTCTTTGTCTGGG 393
||||||||||.|..||.|||.|..|.||.||..|||||||.|||.|.|||
BL01074___hem 344 CGACAAAAATCGGTCCTTTTCTGACAACCGGCTTGTTTTCCTTGCCGGGG 393
BSNT_01728___ 394 AAGGCCAGAGCTGCAATGGATTTCATCCTGCCTGCAAGCAAAACAAAGGA 443
|||...|||||.|.|||||||||..|.||.||.||||||||..|..||||
BL01074___hem 394 AAGTTGAGAGCCGGAATGGATTTGGTGCTTCCAGCAAGCAAGCCGCAGGA 443
BSNT_01728___ 444 TGATCAGTCATTGGGAGAATTCTTCCGCAGACGTGTCGGAGATGAAGTGG 493
.||.||.||..|.||||||||.|||.|.||.||.|||||.|.||||||||
BL01074___hem 444 AGACCAATCGCTCGGAGAATTTTTCAGAAGGCGCGTCGGCGGTGAAGTGG 493
BSNT_01728___ 494 TCGAGAACTTAATCGAGCCGCTTCTATCAGGGATCTATGCAGGCGACATT 543
|.||||||.|.|||||.||||||.|.|||||.||.|||||.||.|||||.
BL01074___hem 494 TGGAGAACCTGATCGAACCGCTTTTGTCAGGCATTTATGCCGGGGACATC 543
BSNT_01728___ 544 GACAAGCTCAGCCTGATGTCGACATTCCCGCAATTTTACCAGACAGAACA 593
|||...|||||.|||||||||||.||||||||.||.||.||||||||.||
BL01074___hem 544 GACCGTCTCAGTCTGATGTCGACTTTCCCGCAGTTCTATCAGACAGAGCA 593
BSNT_01728___ 594 AAAGCATAGAAGCCTGATTCTCGGCATGAAAAAAACAAGGC-CTCAAGGC 642
.|||.|.||||||.||||..||||.|||||||||.| || | |||
BL01074___hem 594 GAAGTACAGAAGCTTGATCATCGGGATGAAAAAATC---GCGC----GGC 636
BSNT_01728___ 643 TCAGGCCAGCAGCTGACGGCAAAG------------AAGCAAGGCCAGTT 680
|.|||| ||| |.||| |||| |||.||||||||||
BL01074___hem 637 ---GCCCAG-AGC-GTCGG-AAAGCCTGCAAACAAAAAGAAAGGCCAGTT 680
BSNT_01728___ 681 CCAGACTTTGTCAACCGGATTGCAAACCCTTGTTGAAGAGATCGAAAAGC 730
||||||..||..||||||..||||.||..|.||||||||..|.|||||||
BL01074___hem 681 CCAGACGGTGAAAACCGGCCTGCAGACGATAGTTGAAGAATTGGAAAAGC 730
BSNT_01728___ 731 AGTTAAAGC-TGACGAAGGTGTATAAAGGCACAAAAGTGACCAAGC-TCA 778
||.| ..|| |.||.|||||.||||||||||||||.|| | |||
BL01074___hem 731 AGCT-CGGCATCACAAAGGTTTATAAAGGCACAAAGGT-------CGTCA 772
BSNT_01728___ 779 GC------CGTGGCGGCTCTGGTTACTCGCTCGAA--TTGGATAACGGC- 819
|| ||||..|||||.|.|||| .||..||| || ||.||||||
BL01074___hem 773 GCATTGAGCGTGCGGGCTCGGCTTAC-AGCATGAAGCTT-GACAACGGCA 820
BSNT_01728___ 820 --GTCACACTTGATGCTGATTCAGTAATTGTGACTGCTCCGCATAAAGCG 867
|| .|||.|.||.|||||.|...|.||.||.|||||.||||||||.
BL01074___hem 821 AGGT---GCTTCACGCCGATTCGGCCGTGGTCACCGCTCCTCATAAAGCA 867
BSNT_01728___ 868 GCTGCGGGAATGCTTTC----TGAGCTTCCTGCCATT-TCTCA----TTT 908
|||||.|..||| |||| .||| .||| .||.| |||
BL01074___hem 868 GCTGCCGCGATG-TTTCAAAAAGAG--------GATTGGCTGAAGGGTTT 908
BSNT_01728___ 909 GAAAAATATGCACTCCACATCGGTGGCAAATGTCGCTTTAGGTTTCCCTG 958
..|..|||||...||.|||||.||.||.|||||.||..|.||.||.||.|
BL01074___hem 909 AGAGGATATGGTGTCAACATCTGTCGCCAATGTGGCGCTCGGATTTCCGG 958
BSNT_01728___ 959 AAGGCTCCGTCGAGATGGAGCATGAGGGCACGGGTTTTGTTATTTCAAGA 1008
|||...|||||.|.|||||||||.|.||||||||.|||||.|||||||||
BL01074___hem 959 AAGAAGCCGTCCAAATGGAGCATCAAGGCACGGGCTTTGTCATTTCAAGA 1008
BSNT_01728___ 1009 AACAGTGACTTTGCGATCACTGCCTGTACGTGGACGAATAAAAAATGGCC 1058
|||||.||.|||.|.||.||.||.|||||.|||||.||.|||||||||||
BL01074___hem 1009 AACAGCGATTTTTCCATTACGGCGTGTACCTGGACAAACAAAAAATGGCC 1058
BSNT_01728___ 1059 GCACGCAGCTCCGGAAGGCAAAACGCTGCTTCGGGCATATGTCGGAAAAG 1108
|..|.||.|.||.|||||.|||...|||||..||||.|||||.||.||||
BL01074___hem 1059 GAGCACAACGCCTGAAGGAAAAGTCCTGCTAAGGGCTTATGTAGGGAAAG 1108
BSNT_01728___ 1109 CTGGAGACGAATCCATTGTCGATCTATCAGATAATGACATTATCAACATT 1158
|.||.||.||.|||.|||||||.|..||.|||||.||.||..|.||.||.
BL01074___hem 1109 CCGGCGATGAGTCCGTTGTCGAACAGTCTGATAACGAAATGGTGAAAATC 1158
BSNT_01728___ 1159 GTGTTAGAAGACTTAAA---GAAAGTCATGAACATAAACGGCGAGCCGGA 1205
||..|.||.||.||||| || |.|||||.||..|||||||.|||||
BL01074___hem 1159 GTCCTCGACGATTTAAAACGGA---TTATGAAGATCGACGGCGAACCGGA 1205
BSNT_01728___ 1206 AATGACATGTGTCACCCGATGGCATGAAAGC-ATGCCGCAGTACCATGTC 1254
||||||.||..||||..||||||||| |||| ||||||||.|||||||||
BL01074___hem 1206 AATGACCTGCATCACAAGATGGCATG-AAGCGATGCCGCAATACCATGTC 1254
BSNT_01728___ 1255 GGCCATAAGCAGCGTATCAAGGAGCTGCGTGAAGCACTTGCATCTGCG-- 1302
|||||||||.|..|.||.||.||..|..|.|||| .||||.| .|||
BL01074___hem 1255 GGCCATAAGAAAAGAATTAAAGAAATCAGGGAAG-GCTTGGA--AGCGTC 1301
BSNT_01728___ 1303 -TATCCGGGTGTTTATATGACAGGCGCTTCTTTCGAAGGTGTCGGCATTC 1351
|||||||||||||..||.||.||.||.||.||.|||||.||||||||.|
BL01074___hem 1302 CTATCCGGGTGTTTTCATTACGGGGGCCTCATTTGAAGGGGTCGGCATCC 1351
BSNT_01728___ 1352 CCGACTGCATTGATCAAGGAAA--AGCTGCCGTGTCTGA------CGCGC 1393
|.||.|||||.||.|||||.|| || |||||..|.|| |.|||
BL01074___hem 1352 CTGATTGCATCGACCAAGGCAAGCAG--GCCGTCGCCGATGTACTCTCGC 1399
BSNT_01728___ 1394 TTACCTATTTATTCAGCTAA--- 1413
||||.|| |.||
BL01074___hem 1400 --ACCTTTT-------CGAATAA 1413
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